| Definition | Thermomicrobium roseum DSM 5159 plasmid unnamed, complete sequence. |
|---|---|
| Accession | NC_011961 |
| Length | 917,738 |
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The map label for this gene is 221636026
Identifier: 221636026
GI number: 221636026
Start: 609695
End: 610351
Strand: Reverse
Name: 221636026
Synonym: trd_A0620
Alternate gene names: NA
Gene position: 610351-609695 (Counterclockwise)
Preceding gene: 221636028
Following gene: 221636025
Centisome position: 66.51
GC content: 67.43
Gene sequence:
>657_bases ATGCAGGTCGAGGAGGAGTTACTCCAGAGCGAGGGGCTGGTGTGCTCACCTCGCGGAAGGATGCGGTATGATCGATTCAG GTTCTCGGCCGATCAGGGGACGACGACAGTGGAGACGAGGCTGCCGATGCTGGAGGAGCTTGCCCGCGAGGCGGGTGGGG ACTGGCCGCTCGTCGCGCGGCTTGCTCACCTGGTGGCTCTGGCGGTGCGGGGACAGCTGGCACTGGAGGTCGGAGCTGGT CCCGGGGTCGTGACCGTGTGGTTAGCCGATGCGATGGAGCAGACCGGCGGTCGTTTGGTCGTGCTGGAACAGGATCCGAT AGTCATCGAGTCCGTCACTGGACGCCTGGAGGACCTGGGGCTGATGGAGCGCGTGCAACTCCTGCAGGGGGACGCTCACC GGACGATCCACACGGTGGCTGGGCCGTTCGATCTGGTCCGGCTGGCGGCCGACCGGAGCGGCTATCTCGACTACTACCGG GCCGTGCGGGACCGGCTGCGACCGGGTGCAGTCATCCTGGCGGAGGGATTGGCCAGGGAGGCGGCGCGGCCGTTTCGGGA GACGGTACGGGCCGAGATCGACTTGCGGACGGTGGAGTTGCCCATGCGCGGGCAGAGTCTGATCGGGGTCTGGTGGCCGA GTCGAGGGCGTGAATGA
Upstream 100 bases:
>100_bases GTAACCCTCCGATCTGCCACCCTCCCGTCTGGTGCGCAAGCGTACTGCGAATGCACACCACAGTGCGGTGGTCGTTCGGT ATCCGCGAACGAGGCTGCTC
Downstream 100 bases:
>100_bases AAGGAGGACGGAGCGATGCCGATCTATGTGATGTTGAGCAGCCTGACCGACGACGGAATGGAGACGCTGCACGAGCATCC CGAGCGGATCAAGGAGGTCA
Product: O-methyltransferase
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 218; Mature: 218
Protein sequence:
>218_residues MQVEEELLQSEGLVCSPRGRMRYDRFRFSADQGTTTVETRLPMLEELAREAGGDWPLVARLAHLVALAVRGQLALEVGAG PGVVTVWLADAMEQTGGRLVVLEQDPIVIESVTGRLEDLGLMERVQLLQGDAHRTIHTVAGPFDLVRLAADRSGYLDYYR AVRDRLRPGAVILAEGLAREAARPFRETVRAEIDLRTVELPMRGQSLIGVWWPSRGRE
Sequences:
>Translated_218_residues MQVEEELLQSEGLVCSPRGRMRYDRFRFSADQGTTTVETRLPMLEELAREAGGDWPLVARLAHLVALAVRGQLALEVGAG PGVVTVWLADAMEQTGGRLVVLEQDPIVIESVTGRLEDLGLMERVQLLQGDAHRTIHTVAGPFDLVRLAADRSGYLDYYR AVRDRLRPGAVILAEGLAREAARPFRETVRAEIDLRTVELPMRGQSLIGVWWPSRGRE >Mature_218_residues MQVEEELLQSEGLVCSPRGRMRYDRFRFSADQGTTTVETRLPMLEELAREAGGDWPLVARLAHLVALAVRGQLALEVGAG PGVVTVWLADAMEQTGGRLVVLEQDPIVIESVTGRLEDLGLMERVQLLQGDAHRTIHTVAGPFDLVRLAADRSGYLDYYR AVRDRLRPGAVILAEGLAREAARPFRETVRAEIDLRTVELPMRGQSLIGVWWPSRGRE
Specific function: Unknown
COG id: COG4122
COG function: function code R; Predicted O-methyltransferase
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 24236; Mature: 24236
Theoretical pI: Translated: 5.18; Mature: 5.18
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.5 %Cys (Translated Protein) 2.8 %Met (Translated Protein) 3.2 %Cys+Met (Translated Protein) 0.5 %Cys (Mature Protein) 2.8 %Met (Mature Protein) 3.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MQVEEELLQSEGLVCSPRGRMRYDRFRFSADQGTTTVETRLPMLEELAREAGGDWPLVAR CCHHHHHHHHCCCEECCCCCCCHHHHEEECCCCCEEHHHHHHHHHHHHHHCCCCCHHHHH LAHLVALAVRGQLALEVGAGPGVVTVWLADAMEQTGGRLVVLEQDPIVIESVTGRLEDLG HHHHHHHHHCCCEEEEECCCCCEEEHHHHHHHHHCCCEEEEEECCCEEEEHHHCHHHHHH LMERVQLLQGDAHRTIHTVAGPFDLVRLAADRSGYLDYYRAVRDRLRPGAVILAEGLARE HHHHHHHHHCCCHHHHHHHCCHHHHHHHHHCCCCHHHHHHHHHHHCCCCEEEEHHHHHHH AARPFRETVRAEIDLRTVELPMRGQSLIGVWWPSRGRE HHHHHHHHHHHHHCEEEEEECCCCCEEEEEECCCCCCC >Mature Secondary Structure MQVEEELLQSEGLVCSPRGRMRYDRFRFSADQGTTTVETRLPMLEELAREAGGDWPLVAR CCHHHHHHHHCCCEECCCCCCCHHHHEEECCCCCEEHHHHHHHHHHHHHHCCCCCHHHHH LAHLVALAVRGQLALEVGAGPGVVTVWLADAMEQTGGRLVVLEQDPIVIESVTGRLEDLG HHHHHHHHHCCCEEEEECCCCCEEEHHHHHHHHHCCCEEEEEECCCEEEEHHHCHHHHHH LMERVQLLQGDAHRTIHTVAGPFDLVRLAADRSGYLDYYRAVRDRLRPGAVILAEGLARE HHHHHHHHHCCCHHHHHHHCCHHHHHHHHHCCCCHHHHHHHHHHHCCCCEEEEHHHHHHH AARPFRETVRAEIDLRTVELPMRGQSLIGVWWPSRGRE HHHHHHHHHHHHHCEEEEEECCCCCEEEEEECCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA