| Definition | Thermomicrobium roseum DSM 5159 plasmid unnamed, complete sequence. |
|---|---|
| Accession | NC_011961 |
| Length | 917,738 |
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The map label for this gene is 221636003
Identifier: 221636003
GI number: 221636003
Start: 586989
End: 588284
Strand: Reverse
Name: 221636003
Synonym: trd_A0597
Alternate gene names: NA
Gene position: 588284-586989 (Counterclockwise)
Preceding gene: 221636006
Following gene: 221636001
Centisome position: 64.1
GC content: 64.66
Gene sequence:
>1296_bases ATGACGTGCAACGAACGGTACGTGACCGTCGTACGCGATAGTCTCTACGATCGCATTCCGTTGACTCGAGCCGAAGTGGC GCTGATCAGCACGCCGACCTTCCAGCGACTGGACCGCATTCAGCAGCTCGGCTTCGTCAGCAAGATTTGGCCAGGGGCGA AGCACACCCGCTACGAGCATTCGCTCGGTGTGCTGCACCTGATGCGCCAGGCTTTGGCGACCTTACGGCGGCACGATGCT GGTTGGATCGACGACGAGACGCGACGGACTGCCTTGGCAGCCGCACTGCTGCACGACGTGGGGCACTACCCGTTCAGCCA CGCGATCGAGGAGCTAGGGCGACCAGTGCTGCCGCACGAGGAGGTGGGCCGCCAGTTGATCGAGCGGAGCGAGCTGGCGG AGGTTTTGGAGCGGGAGTGGGCAGTCGAGCCTCGACGGGTCGCTGATCTCATCGCGCCACGCGGAGCACTCGCGGCGGCG TATCGCCTCGTCCGGGGGCTCTTGAGTGGTGCGCTGGACGTGGACAAGCTCGATTACCTCCCCCGCGATGCTCGCCACTG TAATGTTCCCTATGGCGGCGTCGACACGCCGCGCCTGCTCGATGCGCTGCGAGTCGCCGACGTGCACGGTGTGCCGCGGG TCGTGGTGACCGCCAAGGGAGTGAGCCCGCTGCATTCGCTCATCAACGCGCGGCAGGAGATGTTCGACAACGTGTACTGG CACCATGCCAATCGAGCGGCGATGGCAATGTTGCAGCGCGCCGTGCAGGACGCACTCCTCGTTGGGGCGATAACTGCCGA GGAACTGCCGCGTCATGACGATGCCTCGCTGCTGGCTCGCTTGAGCGAGCCCGGCATGCCGGAGAGTACGAGGCAACTCG TGCTCCGGTTGCGGGATCGCGTTCTCCACAAGCGTGCGCTCGAGGTCAGTGCGCGTGCGCCTGATCTCTATCGGTATCTC AGCAGTCTGTACGGTCGACCGGCGGCCCGTCGCGAGCTGGAAGGAGTTCTGGCGCAACGTCTCAGCGATTTGCTCGGCGA ACCGGTGGCGGATTGGGAAGTGCTGTTGGCGATCCCCAAACCGGAGAAATGGAGCACCGATGTCTGGGTGCTCTTCGAGC GTCCACCGCTCGGCTTTCAGCCCTTGATGCCCTGGCAGGATGTGGTGGGACTGACTGACGCTGACTTCGCGCGCTTCGAG GAGCATCGTCGACTGATCCGGGTGGTCACGACAGCACGCTTGCGGGAGGCGGTGGCCCGACACTGGCCGCGACTGCTCTT GCCACTGCTCCAGTGA
Upstream 100 bases:
>100_bases AGAACCAGTGACCGGAACCACGGCATCGGGATCCTCCACCCGTTCGCCCGCATCCGACCGCAGGGCAGTGTAGCATCGTC GGCGAGACGAGGAGCGGCCG
Downstream 100 bases:
>100_bases TCGTGGGCCTGCTCAGTGGTGTCGCCGAGCTAGCGTACTCAGCGCGAGACCGAGCAGGAGGCAGAACGAGCCGAGCAGGC TGGTGGTCAGGAGGGCCAGA
Product: metal dependent phosphohydrolase
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 431; Mature: 430
Protein sequence:
>431_residues MTCNERYVTVVRDSLYDRIPLTRAEVALISTPTFQRLDRIQQLGFVSKIWPGAKHTRYEHSLGVLHLMRQALATLRRHDA GWIDDETRRTALAAALLHDVGHYPFSHAIEELGRPVLPHEEVGRQLIERSELAEVLEREWAVEPRRVADLIAPRGALAAA YRLVRGLLSGALDVDKLDYLPRDARHCNVPYGGVDTPRLLDALRVADVHGVPRVVVTAKGVSPLHSLINARQEMFDNVYW HHANRAAMAMLQRAVQDALLVGAITAEELPRHDDASLLARLSEPGMPESTRQLVLRLRDRVLHKRALEVSARAPDLYRYL SSLYGRPAARRELEGVLAQRLSDLLGEPVADWEVLLAIPKPEKWSTDVWVLFERPPLGFQPLMPWQDVVGLTDADFARFE EHRRLIRVVTTARLREAVARHWPRLLLPLLQ
Sequences:
>Translated_431_residues MTCNERYVTVVRDSLYDRIPLTRAEVALISTPTFQRLDRIQQLGFVSKIWPGAKHTRYEHSLGVLHLMRQALATLRRHDA GWIDDETRRTALAAALLHDVGHYPFSHAIEELGRPVLPHEEVGRQLIERSELAEVLEREWAVEPRRVADLIAPRGALAAA YRLVRGLLSGALDVDKLDYLPRDARHCNVPYGGVDTPRLLDALRVADVHGVPRVVVTAKGVSPLHSLINARQEMFDNVYW HHANRAAMAMLQRAVQDALLVGAITAEELPRHDDASLLARLSEPGMPESTRQLVLRLRDRVLHKRALEVSARAPDLYRYL SSLYGRPAARRELEGVLAQRLSDLLGEPVADWEVLLAIPKPEKWSTDVWVLFERPPLGFQPLMPWQDVVGLTDADFARFE EHRRLIRVVTTARLREAVARHWPRLLLPLLQ >Mature_430_residues TCNERYVTVVRDSLYDRIPLTRAEVALISTPTFQRLDRIQQLGFVSKIWPGAKHTRYEHSLGVLHLMRQALATLRRHDAG WIDDETRRTALAAALLHDVGHYPFSHAIEELGRPVLPHEEVGRQLIERSELAEVLEREWAVEPRRVADLIAPRGALAAAY RLVRGLLSGALDVDKLDYLPRDARHCNVPYGGVDTPRLLDALRVADVHGVPRVVVTAKGVSPLHSLINARQEMFDNVYWH HANRAAMAMLQRAVQDALLVGAITAEELPRHDDASLLARLSEPGMPESTRQLVLRLRDRVLHKRALEVSARAPDLYRYLS SLYGRPAARRELEGVLAQRLSDLLGEPVADWEVLLAIPKPEKWSTDVWVLFERPPLGFQPLMPWQDVVGLTDADFARFEE HRRLIRVVTTARLREAVARHWPRLLLPLLQ
Specific function: Unknown
COG id: COG1078
COG function: function code R; HD superfamily phosphohydrolases
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Contains 1 HD domain [H]
Homologues:
Organism=Homo sapiens, GI38016914, Length=281, Percent_Identity=29.1814946619217, Blast_Score=94, Evalue=2e-19, Organism=Caenorhabditis elegans, GI17537829, Length=301, Percent_Identity=26.578073089701, Blast_Score=90, Evalue=2e-18, Organism=Caenorhabditis elegans, GI17537827, Length=301, Percent_Identity=26.578073089701, Blast_Score=90, Evalue=2e-18,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR003607 - InterPro: IPR006675 - InterPro: IPR011991 [H]
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 48971; Mature: 48840
Theoretical pI: Translated: 8.65; Mature: 8.65
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.5 %Cys (Translated Protein) 1.6 %Met (Translated Protein) 2.1 %Cys+Met (Translated Protein) 0.5 %Cys (Mature Protein) 1.4 %Met (Mature Protein) 1.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTCNERYVTVVRDSLYDRIPLTRAEVALISTPTFQRLDRIQQLGFVSKIWPGAKHTRYEH CCCCHHHHHHHHHHHHHHCCCCHHHEEEECCCHHHHHHHHHHHHHHHHHCCCCCCCCHHH SLGVLHLMRQALATLRRHDAGWIDDETRRTALAAALLHDVGHYPFSHAIEELGRPVLPHE HHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHCCCCHHHHHHHHCCCCCCHH EVGRQLIERSELAEVLEREWAVEPRRVADLIAPRGALAAAYRLVRGLLSGALDVDKLDYL HHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHCCCHHHHHHHHHHHHHHHCCCCHHHHHCC PRDARHCNVPYGGVDTPRLLDALRVADVHGVPRVVVTAKGVSPLHSLINARQEMFDNVYW CCCCCCCCCCCCCCCCHHHHHHHHHHHHCCCCEEEEEECCHHHHHHHHHHHHHHHHHHHH HHANRAAMAMLQRAVQDALLVGAITAEELPRHDDASLLARLSEPGMPESTRQLVLRLRDR HCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHCCCCCCHHHHHHHHHHHHH VLHKRALEVSARAPDLYRYLSSLYGRPAARRELEGVLAQRLSDLLGEPVADWEVLLAIPK HHHHHHHHHHCCCCHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHCCCCCCCEEEEECCC PEKWSTDVWVLFERPPLGFQPLMPWQDVVGLTDADFARFEEHRRLIRVVTTARLREAVAR CCCCCCCEEEEEECCCCCCCCCCCHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHH HWPRLLLPLLQ HHHHHHHHHCC >Mature Secondary Structure TCNERYVTVVRDSLYDRIPLTRAEVALISTPTFQRLDRIQQLGFVSKIWPGAKHTRYEH CCCHHHHHHHHHHHHHHCCCCHHHEEEECCCHHHHHHHHHHHHHHHHHCCCCCCCCHHH SLGVLHLMRQALATLRRHDAGWIDDETRRTALAAALLHDVGHYPFSHAIEELGRPVLPHE HHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHCCCCHHHHHHHHCCCCCCHH EVGRQLIERSELAEVLEREWAVEPRRVADLIAPRGALAAAYRLVRGLLSGALDVDKLDYL HHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHCCCHHHHHHHHHHHHHHHCCCCHHHHHCC PRDARHCNVPYGGVDTPRLLDALRVADVHGVPRVVVTAKGVSPLHSLINARQEMFDNVYW CCCCCCCCCCCCCCCCHHHHHHHHHHHHCCCCEEEEEECCHHHHHHHHHHHHHHHHHHHH HHANRAAMAMLQRAVQDALLVGAITAEELPRHDDASLLARLSEPGMPESTRQLVLRLRDR HCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHCCCCCCHHHHHHHHHHHHH VLHKRALEVSARAPDLYRYLSSLYGRPAARRELEGVLAQRLSDLLGEPVADWEVLLAIPK HHHHHHHHHHCCCCHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHCCCCCCCEEEEECCC PEKWSTDVWVLFERPPLGFQPLMPWQDVVGLTDADFARFEEHRRLIRVVTTARLREAVAR CCCCCCCEEEEEECCCCCCCCCCCHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHH HWPRLLLPLLQ HHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 8688087 [H]