Definition Thermomicrobium roseum DSM 5159 plasmid unnamed, complete sequence.
Accession NC_011961
Length 917,738

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The map label for this gene is 221636003

Identifier: 221636003

GI number: 221636003

Start: 586989

End: 588284

Strand: Reverse

Name: 221636003

Synonym: trd_A0597

Alternate gene names: NA

Gene position: 588284-586989 (Counterclockwise)

Preceding gene: 221636006

Following gene: 221636001

Centisome position: 64.1

GC content: 64.66

Gene sequence:

>1296_bases
ATGACGTGCAACGAACGGTACGTGACCGTCGTACGCGATAGTCTCTACGATCGCATTCCGTTGACTCGAGCCGAAGTGGC
GCTGATCAGCACGCCGACCTTCCAGCGACTGGACCGCATTCAGCAGCTCGGCTTCGTCAGCAAGATTTGGCCAGGGGCGA
AGCACACCCGCTACGAGCATTCGCTCGGTGTGCTGCACCTGATGCGCCAGGCTTTGGCGACCTTACGGCGGCACGATGCT
GGTTGGATCGACGACGAGACGCGACGGACTGCCTTGGCAGCCGCACTGCTGCACGACGTGGGGCACTACCCGTTCAGCCA
CGCGATCGAGGAGCTAGGGCGACCAGTGCTGCCGCACGAGGAGGTGGGCCGCCAGTTGATCGAGCGGAGCGAGCTGGCGG
AGGTTTTGGAGCGGGAGTGGGCAGTCGAGCCTCGACGGGTCGCTGATCTCATCGCGCCACGCGGAGCACTCGCGGCGGCG
TATCGCCTCGTCCGGGGGCTCTTGAGTGGTGCGCTGGACGTGGACAAGCTCGATTACCTCCCCCGCGATGCTCGCCACTG
TAATGTTCCCTATGGCGGCGTCGACACGCCGCGCCTGCTCGATGCGCTGCGAGTCGCCGACGTGCACGGTGTGCCGCGGG
TCGTGGTGACCGCCAAGGGAGTGAGCCCGCTGCATTCGCTCATCAACGCGCGGCAGGAGATGTTCGACAACGTGTACTGG
CACCATGCCAATCGAGCGGCGATGGCAATGTTGCAGCGCGCCGTGCAGGACGCACTCCTCGTTGGGGCGATAACTGCCGA
GGAACTGCCGCGTCATGACGATGCCTCGCTGCTGGCTCGCTTGAGCGAGCCCGGCATGCCGGAGAGTACGAGGCAACTCG
TGCTCCGGTTGCGGGATCGCGTTCTCCACAAGCGTGCGCTCGAGGTCAGTGCGCGTGCGCCTGATCTCTATCGGTATCTC
AGCAGTCTGTACGGTCGACCGGCGGCCCGTCGCGAGCTGGAAGGAGTTCTGGCGCAACGTCTCAGCGATTTGCTCGGCGA
ACCGGTGGCGGATTGGGAAGTGCTGTTGGCGATCCCCAAACCGGAGAAATGGAGCACCGATGTCTGGGTGCTCTTCGAGC
GTCCACCGCTCGGCTTTCAGCCCTTGATGCCCTGGCAGGATGTGGTGGGACTGACTGACGCTGACTTCGCGCGCTTCGAG
GAGCATCGTCGACTGATCCGGGTGGTCACGACAGCACGCTTGCGGGAGGCGGTGGCCCGACACTGGCCGCGACTGCTCTT
GCCACTGCTCCAGTGA

Upstream 100 bases:

>100_bases
AGAACCAGTGACCGGAACCACGGCATCGGGATCCTCCACCCGTTCGCCCGCATCCGACCGCAGGGCAGTGTAGCATCGTC
GGCGAGACGAGGAGCGGCCG

Downstream 100 bases:

>100_bases
TCGTGGGCCTGCTCAGTGGTGTCGCCGAGCTAGCGTACTCAGCGCGAGACCGAGCAGGAGGCAGAACGAGCCGAGCAGGC
TGGTGGTCAGGAGGGCCAGA

Product: metal dependent phosphohydrolase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 431; Mature: 430

Protein sequence:

>431_residues
MTCNERYVTVVRDSLYDRIPLTRAEVALISTPTFQRLDRIQQLGFVSKIWPGAKHTRYEHSLGVLHLMRQALATLRRHDA
GWIDDETRRTALAAALLHDVGHYPFSHAIEELGRPVLPHEEVGRQLIERSELAEVLEREWAVEPRRVADLIAPRGALAAA
YRLVRGLLSGALDVDKLDYLPRDARHCNVPYGGVDTPRLLDALRVADVHGVPRVVVTAKGVSPLHSLINARQEMFDNVYW
HHANRAAMAMLQRAVQDALLVGAITAEELPRHDDASLLARLSEPGMPESTRQLVLRLRDRVLHKRALEVSARAPDLYRYL
SSLYGRPAARRELEGVLAQRLSDLLGEPVADWEVLLAIPKPEKWSTDVWVLFERPPLGFQPLMPWQDVVGLTDADFARFE
EHRRLIRVVTTARLREAVARHWPRLLLPLLQ

Sequences:

>Translated_431_residues
MTCNERYVTVVRDSLYDRIPLTRAEVALISTPTFQRLDRIQQLGFVSKIWPGAKHTRYEHSLGVLHLMRQALATLRRHDA
GWIDDETRRTALAAALLHDVGHYPFSHAIEELGRPVLPHEEVGRQLIERSELAEVLEREWAVEPRRVADLIAPRGALAAA
YRLVRGLLSGALDVDKLDYLPRDARHCNVPYGGVDTPRLLDALRVADVHGVPRVVVTAKGVSPLHSLINARQEMFDNVYW
HHANRAAMAMLQRAVQDALLVGAITAEELPRHDDASLLARLSEPGMPESTRQLVLRLRDRVLHKRALEVSARAPDLYRYL
SSLYGRPAARRELEGVLAQRLSDLLGEPVADWEVLLAIPKPEKWSTDVWVLFERPPLGFQPLMPWQDVVGLTDADFARFE
EHRRLIRVVTTARLREAVARHWPRLLLPLLQ
>Mature_430_residues
TCNERYVTVVRDSLYDRIPLTRAEVALISTPTFQRLDRIQQLGFVSKIWPGAKHTRYEHSLGVLHLMRQALATLRRHDAG
WIDDETRRTALAAALLHDVGHYPFSHAIEELGRPVLPHEEVGRQLIERSELAEVLEREWAVEPRRVADLIAPRGALAAAY
RLVRGLLSGALDVDKLDYLPRDARHCNVPYGGVDTPRLLDALRVADVHGVPRVVVTAKGVSPLHSLINARQEMFDNVYWH
HANRAAMAMLQRAVQDALLVGAITAEELPRHDDASLLARLSEPGMPESTRQLVLRLRDRVLHKRALEVSARAPDLYRYLS
SLYGRPAARRELEGVLAQRLSDLLGEPVADWEVLLAIPKPEKWSTDVWVLFERPPLGFQPLMPWQDVVGLTDADFARFEE
HRRLIRVVTTARLREAVARHWPRLLLPLLQ

Specific function: Unknown

COG id: COG1078

COG function: function code R; HD superfamily phosphohydrolases

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Contains 1 HD domain [H]

Homologues:

Organism=Homo sapiens, GI38016914, Length=281, Percent_Identity=29.1814946619217, Blast_Score=94, Evalue=2e-19,
Organism=Caenorhabditis elegans, GI17537829, Length=301, Percent_Identity=26.578073089701, Blast_Score=90, Evalue=2e-18,
Organism=Caenorhabditis elegans, GI17537827, Length=301, Percent_Identity=26.578073089701, Blast_Score=90, Evalue=2e-18,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003607
- InterPro:   IPR006675
- InterPro:   IPR011991 [H]

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 48971; Mature: 48840

Theoretical pI: Translated: 8.65; Mature: 8.65

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.5 %Cys     (Translated Protein)
1.6 %Met     (Translated Protein)
2.1 %Cys+Met (Translated Protein)
0.5 %Cys     (Mature Protein)
1.4 %Met     (Mature Protein)
1.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTCNERYVTVVRDSLYDRIPLTRAEVALISTPTFQRLDRIQQLGFVSKIWPGAKHTRYEH
CCCCHHHHHHHHHHHHHHCCCCHHHEEEECCCHHHHHHHHHHHHHHHHHCCCCCCCCHHH
SLGVLHLMRQALATLRRHDAGWIDDETRRTALAAALLHDVGHYPFSHAIEELGRPVLPHE
HHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHCCCCHHHHHHHHCCCCCCHH
EVGRQLIERSELAEVLEREWAVEPRRVADLIAPRGALAAAYRLVRGLLSGALDVDKLDYL
HHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHCCCHHHHHHHHHHHHHHHCCCCHHHHHCC
PRDARHCNVPYGGVDTPRLLDALRVADVHGVPRVVVTAKGVSPLHSLINARQEMFDNVYW
CCCCCCCCCCCCCCCCHHHHHHHHHHHHCCCCEEEEEECCHHHHHHHHHHHHHHHHHHHH
HHANRAAMAMLQRAVQDALLVGAITAEELPRHDDASLLARLSEPGMPESTRQLVLRLRDR
HCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHCCCCCCHHHHHHHHHHHHH
VLHKRALEVSARAPDLYRYLSSLYGRPAARRELEGVLAQRLSDLLGEPVADWEVLLAIPK
HHHHHHHHHHCCCCHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHCCCCCCCEEEEECCC
PEKWSTDVWVLFERPPLGFQPLMPWQDVVGLTDADFARFEEHRRLIRVVTTARLREAVAR
CCCCCCCEEEEEECCCCCCCCCCCHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHH
HWPRLLLPLLQ
HHHHHHHHHCC
>Mature Secondary Structure 
TCNERYVTVVRDSLYDRIPLTRAEVALISTPTFQRLDRIQQLGFVSKIWPGAKHTRYEH
CCCHHHHHHHHHHHHHHCCCCHHHEEEECCCHHHHHHHHHHHHHHHHHCCCCCCCCHHH
SLGVLHLMRQALATLRRHDAGWIDDETRRTALAAALLHDVGHYPFSHAIEELGRPVLPHE
HHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHCCCCHHHHHHHHCCCCCCHH
EVGRQLIERSELAEVLEREWAVEPRRVADLIAPRGALAAAYRLVRGLLSGALDVDKLDYL
HHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHCCCHHHHHHHHHHHHHHHCCCCHHHHHCC
PRDARHCNVPYGGVDTPRLLDALRVADVHGVPRVVVTAKGVSPLHSLINARQEMFDNVYW
CCCCCCCCCCCCCCCCHHHHHHHHHHHHCCCCEEEEEECCHHHHHHHHHHHHHHHHHHHH
HHANRAAMAMLQRAVQDALLVGAITAEELPRHDDASLLARLSEPGMPESTRQLVLRLRDR
HCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHCCCCCCHHHHHHHHHHHHH
VLHKRALEVSARAPDLYRYLSSLYGRPAARRELEGVLAQRLSDLLGEPVADWEVLLAIPK
HHHHHHHHHHCCCCHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHCCCCCCCEEEEECCC
PEKWSTDVWVLFERPPLGFQPLMPWQDVVGLTDADFARFEEHRRLIRVVTTARLREAVAR
CCCCCCCEEEEEECCCCCCCCCCCHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHH
HWPRLLLPLLQ
HHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 8688087 [H]