| Definition | Thermomicrobium roseum DSM 5159 plasmid unnamed, complete sequence. |
|---|---|
| Accession | NC_011961 |
| Length | 917,738 |
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The map label for this gene is 221635947
Identifier: 221635947
GI number: 221635947
Start: 533159
End: 533326
Strand: Reverse
Name: 221635947
Synonym: trd_A0541
Alternate gene names: NA
Gene position: 533326-533159 (Counterclockwise)
Preceding gene: 221635948
Following gene: 221635941
Centisome position: 58.11
GC content: 66.07
Gene sequence:
>168_bases GTGAGCTGGGTTCAGAACGTCGTGAGACAGTTCGGTCTCTATCCGCCGCGGGCGTCGGACGGTTGCGGGGAGCTGGCCCT AGTACGAGAGGACCGGGCTGGACGGACCGCTGGTGTGCCAGTTGTCGGCCAACCGGCAGCGCTGGGTAGCCATGTCCGGA CGGGATAA
Upstream 100 bases:
>100_bases TCACATCGACGGCCCGGTTTGGCACCTCGATGTCGGCTCGTCGCATCCTGGGGCTGGAGGAGGTCCCAAGGGTTGGGCTG TTCGCCCATGAAAGCGGCAC
Downstream 100 bases:
>100_bases CCGCTGACAGCATCTAAGCGGGAAGCCCACCCCAAGATGAGCCGTCCCACCCCACACGGGGGTAAGGCCCCGGGGAGATG ACCCGGTAGCGAGGCGGCCG
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 55; Mature: 54
Protein sequence:
>55_residues MSWVQNVVRQFGLYPPRASDGCGELALVREDRAGRTAGVPVVGQPAALGSHVRTG
Sequences:
>Translated_55_residues MSWVQNVVRQFGLYPPRASDGCGELALVREDRAGRTAGVPVVGQPAALGSHVRTG >Mature_54_residues SWVQNVVRQFGLYPPRASDGCGELALVREDRAGRTAGVPVVGQPAALGSHVRTG
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 5791; Mature: 5659
Theoretical pI: Translated: 9.50; Mature: 9.50
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.8 %Cys (Translated Protein) 1.8 %Met (Translated Protein) 3.6 %Cys+Met (Translated Protein) 1.9 %Cys (Mature Protein) 0.0 %Met (Mature Protein) 1.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSWVQNVVRQFGLYPPRASDGCGELALVREDRAGRTAGVPVVGQPAALGSHVRTG CHHHHHHHHHHCCCCCCCCCCCCCEEEECCCCCCCCCCCCCCCCCCCCCCCCCCC >Mature Secondary Structure SWVQNVVRQFGLYPPRASDGCGELALVREDRAGRTAGVPVVGQPAALGSHVRTG HHHHHHHHHHCCCCCCCCCCCCCEEEECCCCCCCCCCCCCCCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA