Definition Thermomicrobium roseum DSM 5159 plasmid unnamed, complete sequence.
Accession NC_011961
Length 917,738

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The map label for this gene is 221635947

Identifier: 221635947

GI number: 221635947

Start: 533159

End: 533326

Strand: Reverse

Name: 221635947

Synonym: trd_A0541

Alternate gene names: NA

Gene position: 533326-533159 (Counterclockwise)

Preceding gene: 221635948

Following gene: 221635941

Centisome position: 58.11

GC content: 66.07

Gene sequence:

>168_bases
GTGAGCTGGGTTCAGAACGTCGTGAGACAGTTCGGTCTCTATCCGCCGCGGGCGTCGGACGGTTGCGGGGAGCTGGCCCT
AGTACGAGAGGACCGGGCTGGACGGACCGCTGGTGTGCCAGTTGTCGGCCAACCGGCAGCGCTGGGTAGCCATGTCCGGA
CGGGATAA

Upstream 100 bases:

>100_bases
TCACATCGACGGCCCGGTTTGGCACCTCGATGTCGGCTCGTCGCATCCTGGGGCTGGAGGAGGTCCCAAGGGTTGGGCTG
TTCGCCCATGAAAGCGGCAC

Downstream 100 bases:

>100_bases
CCGCTGACAGCATCTAAGCGGGAAGCCCACCCCAAGATGAGCCGTCCCACCCCACACGGGGGTAAGGCCCCGGGGAGATG
ACCCGGTAGCGAGGCGGCCG

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 55; Mature: 54

Protein sequence:

>55_residues
MSWVQNVVRQFGLYPPRASDGCGELALVREDRAGRTAGVPVVGQPAALGSHVRTG

Sequences:

>Translated_55_residues
MSWVQNVVRQFGLYPPRASDGCGELALVREDRAGRTAGVPVVGQPAALGSHVRTG
>Mature_54_residues
SWVQNVVRQFGLYPPRASDGCGELALVREDRAGRTAGVPVVGQPAALGSHVRTG

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 5791; Mature: 5659

Theoretical pI: Translated: 9.50; Mature: 9.50

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.8 %Cys     (Translated Protein)
1.8 %Met     (Translated Protein)
3.6 %Cys+Met (Translated Protein)
1.9 %Cys     (Mature Protein)
0.0 %Met     (Mature Protein)
1.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSWVQNVVRQFGLYPPRASDGCGELALVREDRAGRTAGVPVVGQPAALGSHVRTG
CHHHHHHHHHHCCCCCCCCCCCCCEEEECCCCCCCCCCCCCCCCCCCCCCCCCCC
>Mature Secondary Structure 
SWVQNVVRQFGLYPPRASDGCGELALVREDRAGRTAGVPVVGQPAALGSHVRTG
HHHHHHHHHHCCCCCCCCCCCCCEEEECCCCCCCCCCCCCCCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA