| Definition | Thermomicrobium roseum DSM 5159 plasmid unnamed, complete sequence. |
|---|---|
| Accession | NC_011961 |
| Length | 917,738 |
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The map label for this gene is 221635882
Identifier: 221635882
GI number: 221635882
Start: 464579
End: 464881
Strand: Reverse
Name: 221635882
Synonym: trd_A0476
Alternate gene names: NA
Gene position: 464881-464579 (Counterclockwise)
Preceding gene: 221635884
Following gene: 221635880
Centisome position: 50.66
GC content: 70.3
Gene sequence:
>303_bases GTGGGCCGACTCGATACGCCGAGGGCGCGGGATAGCCGTCCGTGCCTCCTCGTCAACTTCGGCGAGTACGCCTGCGGCGA CTTCTACGTCGTCATGCGGGAGGAAGCGCTCCGCGAGCTCGCGGCGCGCAAGTGGACAGTCGACCGGCTCCGGGAAGCGC TCTGCGGTGAGCGCGTCGCCGTCACCGGCGTCCTCGCTACCTACCGCGCGGGCGCGCGCGTCAACCCGCAGATCGAATAC CAGGAACCCGGCCGGCTCGTCGTCTTCCGACCGCCCCAGCGCGGCGGCAACATCGTCATCTGA
Upstream 100 bases:
>100_bases CCGCTCCGGTCCTCTGCGGCCGAACCCCGCCTCCATCATCGATGTACAGCGGAACGCGACACCGTTCGCGCTCCCCGCCA CACTCTAACTTGACGATCCG
Downstream 100 bases:
>100_bases GCACCCCAGCACCCACCGGCGCTGCGCGGCGTCCCACCCGGACGCTCGACCGACACTCGCCAACTCACTCCTCGGCGATC ACCGGGTTCTCCAGCGTGCC
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 100; Mature: 99
Protein sequence:
>100_residues MGRLDTPRARDSRPCLLVNFGEYACGDFYVVMREEALRELAARKWTVDRLREALCGERVAVTGVLATYRAGARVNPQIEY QEPGRLVVFRPPQRGGNIVI
Sequences:
>Translated_100_residues MGRLDTPRARDSRPCLLVNFGEYACGDFYVVMREEALRELAARKWTVDRLREALCGERVAVTGVLATYRAGARVNPQIEY QEPGRLVVFRPPQRGGNIVI >Mature_99_residues GRLDTPRARDSRPCLLVNFGEYACGDFYVVMREEALRELAARKWTVDRLREALCGERVAVTGVLATYRAGARVNPQIEYQ EPGRLVVFRPPQRGGNIVI
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 11308; Mature: 11177
Theoretical pI: Translated: 9.30; Mature: 9.30
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
3.0 %Cys (Translated Protein) 2.0 %Met (Translated Protein) 5.0 %Cys+Met (Translated Protein) 3.0 %Cys (Mature Protein) 1.0 %Met (Mature Protein) 4.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MGRLDTPRARDSRPCLLVNFGEYACGDFYVVMREEALRELAARKWTVDRLREALCGERVA CCCCCCCCCCCCCCEEEEECCCCCCCCEEEEEHHHHHHHHHHCCCCHHHHHHHHCCCCCH VTGVLATYRAGARVNPQIEYQEPGRLVVFRPPQRGGNIVI HHHHHHHHCCCCCCCCEEEECCCCEEEEECCCCCCCCEEC >Mature Secondary Structure GRLDTPRARDSRPCLLVNFGEYACGDFYVVMREEALRELAARKWTVDRLREALCGERVA CCCCCCCCCCCCCEEEEECCCCCCCCEEEEEHHHHHHHHHHCCCCHHHHHHHHCCCCCH VTGVLATYRAGARVNPQIEYQEPGRLVVFRPPQRGGNIVI HHHHHHHHCCCCCCCCEEEECCCCEEEEECCCCCCCCEEC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA