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The map label for this gene is ycjP [C]

Identifier: 221635874

GI number: 221635874

Start: 455626

End: 456471

Strand: Reverse

Name: ycjP [C]

Synonym: trd_A0468

Alternate gene names: 221635874

Gene position: 456471-455626 (Counterclockwise)

Preceding gene: 221635875

Following gene: 221635873

Centisome position: 49.74

GC content: 62.41

Gene sequence:

>846_bases
ATGAGCGCTCGCGAGTTCCCCGTTCGCCGCCTTCGCCCCGCTCGCCTGGCCATGTACGCCATCATGGTCGGGTTCGCGCT
CTTCTACCTCTTGCCCGTCTATCTCATGTTCATCACCGGGATGAAGAGCTTCGAAGAGGTGAACATCAGCCGGATGTGGG
ACCTCCCCTCCGGCCTGCGGTTCGATAGCTTCATGGCGGCGTGGAAGACACTGGAACGGAGCTTCCTGAACAGCTTCCAG
ATGGTCATCCCCGCGACGATCGTCTCCAGCCTGCTCGGCTCGCTCAACGGCTACGTCCTGTCCAAATGGCGCTTCCGCGG
GTCCGATGCCCTGTTCACGGCTATCCTGTTCGGGATGTTCATCCCCTATCAGAGCATCTTGATCCCGCTCGTCTTGACGC
TGCAGCGCTTGGGGCTCTACGGGTCGATCCCCGGCCTCATCCTCACCCACGTCGTCTACGGCATCCCGATCACGACGCTC
ATCTTCCGCAACTACTACGCCTCCATCCCGACGGAACTGCTCGAGGCAGCCAAGGTCGATGGCGCCGGGTTCTTCACCAT
CTACCGGCGCGTCATCTTGCCGCTCTCGGCGACCGGTTTCGTGGTGGTCGCCATCTGGCAGTTCACCTCGATCTGGAACG
AGTTCCTCTTCGGACTCGTCATCACCAACTCGCCGCAGGAGCGGCCGGTGACGGTCGCGCTCCAGAACATCGCCGGGAGC
CAGTACACGATGTGGAACGTCCAGATGGCCGGCGCGCTTTTGGTCGCGCTGCCGACGCTGCTGGTCTACATTCTCCTAGG
ACGCTACTTCCTGCGCGGCCTGCTCGCCGGCTCCCTCAAGGGTTGA

Upstream 100 bases:

>100_bases
AGTACGCGGAGGGAGCTGCGATCGCCATCGTCATGCTGGTCATGGTCTCGGTCCTGATCGTCCCCTACTTGATCTGGCGG
CTGCGCACGGAGACCGAACG

Downstream 100 bases:

>100_bases
CGGCCCGATGGCGCGCCGCGGCGCGTCCGAACAGTCCAGCGGACGAGTCGCTGCCTTGCGCAAGCTTTCCGATGCAACCC
AGCTGGTCAGCGCGGGCGGT

Product: ABC transporter, carbohydrate uptake transporter-1 (CUT1) family, permease protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 281; Mature: 280

Protein sequence:

>281_residues
MSAREFPVRRLRPARLAMYAIMVGFALFYLLPVYLMFITGMKSFEEVNISRMWDLPSGLRFDSFMAAWKTLERSFLNSFQ
MVIPATIVSSLLGSLNGYVLSKWRFRGSDALFTAILFGMFIPYQSILIPLVLTLQRLGLYGSIPGLILTHVVYGIPITTL
IFRNYYASIPTELLEAAKVDGAGFFTIYRRVILPLSATGFVVVAIWQFTSIWNEFLFGLVITNSPQERPVTVALQNIAGS
QYTMWNVQMAGALLVALPTLLVYILLGRYFLRGLLAGSLKG

Sequences:

>Translated_281_residues
MSAREFPVRRLRPARLAMYAIMVGFALFYLLPVYLMFITGMKSFEEVNISRMWDLPSGLRFDSFMAAWKTLERSFLNSFQ
MVIPATIVSSLLGSLNGYVLSKWRFRGSDALFTAILFGMFIPYQSILIPLVLTLQRLGLYGSIPGLILTHVVYGIPITTL
IFRNYYASIPTELLEAAKVDGAGFFTIYRRVILPLSATGFVVVAIWQFTSIWNEFLFGLVITNSPQERPVTVALQNIAGS
QYTMWNVQMAGALLVALPTLLVYILLGRYFLRGLLAGSLKG
>Mature_280_residues
SAREFPVRRLRPARLAMYAIMVGFALFYLLPVYLMFITGMKSFEEVNISRMWDLPSGLRFDSFMAAWKTLERSFLNSFQM
VIPATIVSSLLGSLNGYVLSKWRFRGSDALFTAILFGMFIPYQSILIPLVLTLQRLGLYGSIPGLILTHVVYGIPITTLI
FRNYYASIPTELLEAAKVDGAGFFTIYRRVILPLSATGFVVVAIWQFTSIWNEFLFGLVITNSPQERPVTVALQNIAGSQ
YTMWNVQMAGALLVALPTLLVYILLGRYFLRGLLAGSLKG

Specific function: Probably part of a binding-protein-dependent transport system PH1214/15/16. Probably responsible for the translocation of the substrate across the membrane [H]

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 ABC transmembrane type-1 domain [H]

Homologues:

Organism=Escherichia coli, GI1787571, Length=276, Percent_Identity=26.8115942028986, Blast_Score=109, Evalue=2e-25,
Organism=Escherichia coli, GI1789860, Length=259, Percent_Identity=24.3243243243243, Blast_Score=86, Evalue=2e-18,
Organism=Escherichia coli, GI1790464, Length=196, Percent_Identity=30.1020408163265, Blast_Score=73, Evalue=2e-14,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000515 [H]

Pfam domain/function: PF00528 BPD_transp_1 [H]

EC number: NA

Molecular weight: Translated: 31573; Mature: 31442

Theoretical pI: Translated: 10.27; Mature: 10.27

Prosite motif: PS50928 ABC_TM1

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
3.9 %Met     (Translated Protein)
3.9 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
3.6 %Met     (Mature Protein)
3.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSAREFPVRRLRPARLAMYAIMVGFALFYLLPVYLMFITGMKSFEEVNISRMWDLPSGLR
CCCCCCCHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHCCHHHHCCCCCCCC
FDSFMAAWKTLERSFLNSFQMVIPATIVSSLLGSLNGYVLSKWRFRGSDALFTAILFGMF
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHEEECCCHHHHHHHHHHHH
IPYQSILIPLVLTLQRLGLYGSIPGLILTHVVYGIPITTLIFRNYYASIPTELLEAAKVD
HHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHCC
GAGFFTIYRRVILPLSATGFVVVAIWQFTSIWNEFLFGLVITNSPQERPVTVALQNIAGS
CCHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHEECCCCCCCHHHHHHHCCCC
QYTMWNVQMAGALLVALPTLLVYILLGRYFLRGLLAGSLKG
CEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC
>Mature Secondary Structure 
SAREFPVRRLRPARLAMYAIMVGFALFYLLPVYLMFITGMKSFEEVNISRMWDLPSGLR
CCCCCCHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHCCHHHHCCCCCCCC
FDSFMAAWKTLERSFLNSFQMVIPATIVSSLLGSLNGYVLSKWRFRGSDALFTAILFGMF
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHEEECCCHHHHHHHHHHHH
IPYQSILIPLVLTLQRLGLYGSIPGLILTHVVYGIPITTLIFRNYYASIPTELLEAAKVD
HHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHCC
GAGFFTIYRRVILPLSATGFVVVAIWQFTSIWNEFLFGLVITNSPQERPVTVALQNIAGS
CCHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHEECCCCCCCHHHHHHHCCCC
QYTMWNVQMAGALLVALPTLLVYILLGRYFLRGLLAGSLKG
CEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 9679194 [H]