| Definition | Thermomicrobium roseum DSM 5159 plasmid unnamed, complete sequence. |
|---|---|
| Accession | NC_011961 |
| Length | 917,738 |
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The map label for this gene is eat [C]
Identifier: 221635834
GI number: 221635834
Start: 413652
End: 415190
Strand: Reverse
Name: eat [C]
Synonym: trd_A0428
Alternate gene names: 221635834
Gene position: 415190-413652 (Counterclockwise)
Preceding gene: 221635835
Following gene: 221635833
Centisome position: 45.24
GC content: 63.03
Gene sequence:
>1539_bases ATGGGTGAGCAACCGACGATCGAGCGCGGCGGGGTCCGCTACGAGCGAGTCGGACAGGAGTATCTCGAGCAACGCAAACT TCGCCGCCATGCCAACTGGGTGCTTCTCTGGGCGCTCGGGGTGGGAGCGGTCATCTCCGGTGACTTCTTCGGCTGGAACT TCGGCCTGAGTGCTGGCGGCTTCGGCGGTCTCCTCATCGCGACCGTGCTCATGGCGCTGATGTACCTCTTCATGGTGTAC AGCATCGCTGAGCTGACGACCGCCCTGCCCCACGCAGGCGGCTTCTACTCGTTCACGCGCAGCGCCTTCGGTCCGTGGGG AGGCTACCTCGTCGGCGTCACCGACACCATCGAGTACGTCATCACTCCAGCGGTGATCGTGGTCGGGATCGGTGGCTACA TGAATACCCTGTTCCCGCAGGTCCCGGTCTGGCTCTGGTGGCTCTTGTTCTACATGGTCTTCGTCGCTATCAATATCGCT GGTGTCGAGATCACCCTGCGCGTCGGACTCGTCGTCACCATTCTCGCCATGCTCATCCTCGTGATCTTCTACATCGGCGC GGTCGCCAGCGGCGCTTTCAGCTGGGATCTCGTCTTCAACATCGAACCCAATCCTGACCGAGCCGGTAGCTCGACCTTCT TGCCGCAAGGCTTCTTCGGCATCTTCGCGGCCATCCCCTTCGCCATCTGGTTCTACCTCGCGATCGAGGAACTGCCCTTG GCCGCCGAAGAGACTCACGATGTCGTCCGTGACATGCCGAAGGGCCTCATCACTGGTATCTTCACACTGCTCGCGTTGTC GGTCTTCACGCTCGTCTTCAACTCCGGCGTCAACGGCGGAGCCAAGCAAATCGGCGAGTCGAGTGCGCCCTTGGCCGATG GCTTCCAGGCGGTCTTCGGTGCCGGAGCGACGACGACGGTGCTGACGCTCATCGCCCTCACCGGACTGATCGCGAGCTTC CACACCATCATCTATGCCTACGGCCGGGTCATTTTCGCCCTCTCGCGCGCCGGCTACTACCCGCGCTTCCTCTCGGTGAC CAGCCCGAAGACGCACACGCCGCACCGGGCACTCATCGCCGGCGCCATCATCGGTCTCCTCTGCGCAGTGATCATCGACC AGTTCGGAACCGGCATCGTCGGTGCCGCGCTCCTCAACATGGCGGTCTTCGGCGCAGTCATTTCCTATGCCGCGGTGATG CTCGCCTACATCCGCCTCAAGATCACCCGCCCCGACTTGCCACGCCCGTACAAGAGCCCCTTCGGGATTCCGGGCGCAGC CATCGGTGCCGCCCTGGCCATCCTTGCTCTGTTCGCGACCTTCTCCATCCAGGACTACCGCCCAGGCGTGCTGGGTGTCG CCTTCTTCCTCGTGATCGCCCTCCTCTACTTCGCCCTGTATTCGCGGCATCGCCTGGTCGCCCAGGCACCGGAAGAGGAG GTCGCGCTCATCTTGGAAGCCGAAAAGGAGCTCAAGCACCAGTACGTGGAGCTCGAATCGGAGGAAGAGCGGCGTCGCAT GGAGGAGCAGGCGCGGTAA
Upstream 100 bases:
>100_bases CTATGTGACCGCGACAGCGTTCCTGGTCGATGGCGGCATCACCGCCGCCTACATCACACCGGAAGAGTGATCAGCGAGTC AACGAGAGGAGGGAAGCGAG
Downstream 100 bases:
>100_bases GACGCGCCGATCCTCAACCCATGAGCCGGCTCGGCGCGGTCGACTGCGCGGTCGATCCGCGCCGAGTCTTTTGTCCGCCC CGCCTCTTGCGACAGGCGAG
Product: ethanolamine permease
Products: D-glycine [Cytoplasm]; D-alanine [Cytoplasm]; Proton [Cytoplasm]; D-serine [Cytoplasm] [C]
Alternate protein names: NA
Number of amino acids: Translated: 512; Mature: 511
Protein sequence:
>512_residues MGEQPTIERGGVRYERVGQEYLEQRKLRRHANWVLLWALGVGAVISGDFFGWNFGLSAGGFGGLLIATVLMALMYLFMVY SIAELTTALPHAGGFYSFTRSAFGPWGGYLVGVTDTIEYVITPAVIVVGIGGYMNTLFPQVPVWLWWLLFYMVFVAINIA GVEITLRVGLVVTILAMLILVIFYIGAVASGAFSWDLVFNIEPNPDRAGSSTFLPQGFFGIFAAIPFAIWFYLAIEELPL AAEETHDVVRDMPKGLITGIFTLLALSVFTLVFNSGVNGGAKQIGESSAPLADGFQAVFGAGATTTVLTLIALTGLIASF HTIIYAYGRVIFALSRAGYYPRFLSVTSPKTHTPHRALIAGAIIGLLCAVIIDQFGTGIVGAALLNMAVFGAVISYAAVM LAYIRLKITRPDLPRPYKSPFGIPGAAIGAALAILALFATFSIQDYRPGVLGVAFFLVIALLYFALYSRHRLVAQAPEEE VALILEAEKELKHQYVELESEEERRRMEEQAR
Sequences:
>Translated_512_residues MGEQPTIERGGVRYERVGQEYLEQRKLRRHANWVLLWALGVGAVISGDFFGWNFGLSAGGFGGLLIATVLMALMYLFMVY SIAELTTALPHAGGFYSFTRSAFGPWGGYLVGVTDTIEYVITPAVIVVGIGGYMNTLFPQVPVWLWWLLFYMVFVAINIA GVEITLRVGLVVTILAMLILVIFYIGAVASGAFSWDLVFNIEPNPDRAGSSTFLPQGFFGIFAAIPFAIWFYLAIEELPL AAEETHDVVRDMPKGLITGIFTLLALSVFTLVFNSGVNGGAKQIGESSAPLADGFQAVFGAGATTTVLTLIALTGLIASF HTIIYAYGRVIFALSRAGYYPRFLSVTSPKTHTPHRALIAGAIIGLLCAVIIDQFGTGIVGAALLNMAVFGAVISYAAVM LAYIRLKITRPDLPRPYKSPFGIPGAAIGAALAILALFATFSIQDYRPGVLGVAFFLVIALLYFALYSRHRLVAQAPEEE VALILEAEKELKHQYVELESEEERRRMEEQAR >Mature_511_residues GEQPTIERGGVRYERVGQEYLEQRKLRRHANWVLLWALGVGAVISGDFFGWNFGLSAGGFGGLLIATVLMALMYLFMVYS IAELTTALPHAGGFYSFTRSAFGPWGGYLVGVTDTIEYVITPAVIVVGIGGYMNTLFPQVPVWLWWLLFYMVFVAINIAG VEITLRVGLVVTILAMLILVIFYIGAVASGAFSWDLVFNIEPNPDRAGSSTFLPQGFFGIFAAIPFAIWFYLAIEELPLA AEETHDVVRDMPKGLITGIFTLLALSVFTLVFNSGVNGGAKQIGESSAPLADGFQAVFGAGATTTVLTLIALTGLIASFH TIIYAYGRVIFALSRAGYYPRFLSVTSPKTHTPHRALIAGAIIGLLCAVIIDQFGTGIVGAALLNMAVFGAVISYAAVML AYIRLKITRPDLPRPYKSPFGIPGAAIGAALAILALFATFSIQDYRPGVLGVAFFLVIALLYFALYSRHRLVAQAPEEEV ALILEAEKELKHQYVELESEEERRRMEEQAR
Specific function: Probable amino-acid or metabolite transport protein [H]
COG id: COG0531
COG function: function code E; Amino acid transporters
Gene ontology:
Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the amino acid-polyamine-organocation (APC) superfamily [H]
Homologues:
Organism=Homo sapiens, GI33286428, Length=511, Percent_Identity=23.679060665362, Blast_Score=71, Evalue=3e-12, Organism=Homo sapiens, GI258645169, Length=456, Percent_Identity=24.780701754386, Blast_Score=68, Evalue=2e-11, Organism=Homo sapiens, GI258614003, Length=456, Percent_Identity=24.5614035087719, Blast_Score=67, Evalue=4e-11, Organism=Homo sapiens, GI258614005, Length=456, Percent_Identity=24.5614035087719, Blast_Score=67, Evalue=4e-11, Organism=Escherichia coli, GI1786302, Length=403, Percent_Identity=21.8362282878412, Blast_Score=90, Evalue=3e-19, Organism=Escherichia coli, GI1790653, Length=423, Percent_Identity=23.4042553191489, Blast_Score=89, Evalue=9e-19, Organism=Escherichia coli, GI1786602, Length=404, Percent_Identity=21.2871287128713, Blast_Score=84, Evalue=3e-17, Organism=Escherichia coli, GI1788480, Length=444, Percent_Identity=24.0990990990991, Blast_Score=81, Evalue=1e-16, Organism=Escherichia coli, GI87081708, Length=367, Percent_Identity=25.3405994550409, Blast_Score=81, Evalue=1e-16, Organism=Escherichia coli, GI87081869, Length=384, Percent_Identity=24.4791666666667, Blast_Score=81, Evalue=2e-16, Organism=Escherichia coli, GI1786789, Length=429, Percent_Identity=22.3776223776224, Blast_Score=80, Evalue=2e-16, Organism=Escherichia coli, GI87081915, Length=393, Percent_Identity=22.64631043257, Blast_Score=72, Evalue=1e-13, Organism=Escherichia coli, GI1789017, Length=394, Percent_Identity=21.5736040609137, Blast_Score=64, Evalue=2e-11, Organism=Caenorhabditis elegans, GI17532491, Length=366, Percent_Identity=25.4098360655738, Blast_Score=69, Evalue=4e-12, Organism=Saccharomyces cerevisiae, GI6324061, Length=513, Percent_Identity=21.0526315789474, Blast_Score=74, Evalue=5e-14, Organism=Saccharomyces cerevisiae, GI6321629, Length=449, Percent_Identity=21.826280623608, Blast_Score=66, Evalue=2e-11, Organism=Saccharomyces cerevisiae, GI6324059, Length=479, Percent_Identity=21.0855949895616, Blast_Score=65, Evalue=2e-11,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR004841 - InterPro: IPR002293 [H]
Pfam domain/function: PF00324 AA_permease [H]
EC number: NA
Molecular weight: Translated: 55686; Mature: 55555
Theoretical pI: Translated: 6.32; Mature: 6.32
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.2 %Cys (Translated Protein) 2.1 %Met (Translated Protein) 2.3 %Cys+Met (Translated Protein) 0.2 %Cys (Mature Protein) 2.0 %Met (Mature Protein) 2.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MGEQPTIERGGVRYERVGQEYLEQRKLRRHANWVLLWALGVGAVISGDFFGWNFGLSAGG CCCCCCCHHCCCHHHHHHHHHHHHHHHHHHCCEEEEHHHHHHHHHCCCCCCEECCCCCCC FGGLLIATVLMALMYLFMVYSIAELTTALPHAGGFYSFTRSAFGPWGGYLVGVTDTIEYV CHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHCCCCCCCEEEEHHHHHHHH ITPAVIVVGIGGYMNTLFPQVPVWLWWLLFYMVFVAINIAGVEITLRVGLVVTILAMLIL HHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCEEEEHHHHHHHHHHHHHHH VIFYIGAVASGAFSWDLVFNIEPNPDRAGSSTFLPQGFFGIFAAIPFAIWFYLAIEELPL HHHHHHHHHCCCEEEEEEEEECCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCC AAEETHDVVRDMPKGLITGIFTLLALSVFTLVFNSGVNGGAKQIGESSAPLADGFQAVFG CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHCCCCCCCHHHHHHHHHC AGATTTVLTLIALTGLIASFHTIIYAYGRVIFALSRAGYYPRFLSVTSPKTHTPHRALIA CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEECCCCCCCCHHHHHH GAIIGLLCAVIIDQFGTGIVGAALLNMAVFGAVISYAAVMLAYIRLKITRPDLPRPYKSP HHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEECCCCCCCCCCCC FGIPGAAIGAALAILALFATFSIQDYRPGVLGVAFFLVIALLYFALYSRHRLVAQAPEEE CCCCHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHCHHHHCCCHHH VALILEAEKELKHQYVELESEEERRRMEEQAR HHHHHHHHHHHHHHHHCCCCHHHHHHHHHHCC >Mature Secondary Structure GEQPTIERGGVRYERVGQEYLEQRKLRRHANWVLLWALGVGAVISGDFFGWNFGLSAGG CCCCCCHHCCCHHHHHHHHHHHHHHHHHHCCEEEEHHHHHHHHHCCCCCCEECCCCCCC FGGLLIATVLMALMYLFMVYSIAELTTALPHAGGFYSFTRSAFGPWGGYLVGVTDTIEYV CHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHCCCCCCCEEEEHHHHHHHH ITPAVIVVGIGGYMNTLFPQVPVWLWWLLFYMVFVAINIAGVEITLRVGLVVTILAMLIL HHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCEEEEHHHHHHHHHHHHHHH VIFYIGAVASGAFSWDLVFNIEPNPDRAGSSTFLPQGFFGIFAAIPFAIWFYLAIEELPL HHHHHHHHHCCCEEEEEEEEECCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCC AAEETHDVVRDMPKGLITGIFTLLALSVFTLVFNSGVNGGAKQIGESSAPLADGFQAVFG CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHCCCCCCCHHHHHHHHHC AGATTTVLTLIALTGLIASFHTIIYAYGRVIFALSRAGYYPRFLSVTSPKTHTPHRALIA CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEECCCCCCCCHHHHHH GAIIGLLCAVIIDQFGTGIVGAALLNMAVFGAVISYAAVMLAYIRLKITRPDLPRPYKSP HHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEECCCCCCCCCCCC FGIPGAAIGAALAILALFATFSIQDYRPGVLGVAFFLVIALLYFALYSRHRLVAQAPEEE CCCCHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHCHHHHCCCHHH VALILEAEKELKHQYVELESEEERRRMEEQAR HHHHHHHHHHHHHHHHCCCCHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: D-glycine [Periplasm]; D-alanine [Periplasm]; Proton [Periplasm]; D-serine [Periplasm] [C]
Specific reaction: Proton [Periplasm] + D-glycine [Periplasm] = Proton [Cytoplasm] + D-glycine [Cytoplasm] Proton [Periplasm] + D-alanine [Periplasm] = Proton [Cytoplasm] + D-alanine [Cytoplasm] Proton [Periplasm] + D-serine [Periplasm] = Proton [Cytoplasm] + D-serine [Cyto
General reaction: NA
Inhibitor: NA
Structure determination priority: 6.0
TargetDB status: NA
Availability: NA
References: 11481430 [H]