| Definition | Thermomicrobium roseum DSM 5159 plasmid unnamed, complete sequence. |
|---|---|
| Accession | NC_011961 |
| Length | 917,738 |
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The map label for this gene is 221635805
Identifier: 221635805
GI number: 221635805
Start: 387200
End: 387511
Strand: Reverse
Name: 221635805
Synonym: trd_A0399
Alternate gene names: NA
Gene position: 387511-387200 (Counterclockwise)
Preceding gene: 221635806
Following gene: 221635802
Centisome position: 42.22
GC content: 69.55
Gene sequence:
>312_bases TTGGAGAGCAGCTGGGGTCGATCCACGGCCGCGGATCGACTCCAGGCGGGTTCGCAGCGCGGAGAGCGCAGCACGCGAGA GCATGTCGGCACCCAACTCGCGGACCAGGCAGGCGGCGCGAGTGTTCAGTTCACCCCTCGAGCCGGCAGTGGCCGCATCG GTGAGGAGGTCACCGCAGCCTCTCCGACGGCTGGAGCGCTCGCGGCTCGCGCCAGCCGGACGGCCCGCATCCTGAGCCTG GCAGCGGTCTCAGCGTCTCGCAGCGCTTGCCCACACTGTGCTCGTCTACTCTTGTGCTGGCCAGAGGGATGA
Upstream 100 bases:
>100_bases ATGCCATCGGCGTGCACCTGAGCGAGCTCCCCATCACGCCCGAGCGCGTGCTCGCTGCACTGCGCGACAAAGCAGTGAGT TGAGCGAGTAAGGTATCCAA
Downstream 100 bases:
>100_bases ACAAGCTCCCTCTTCACCTGAGGGAGCCCACTGGGCACCTGTCGTCGGCATCCGCTGATCGGCGAGGGGGTATCTGGTTG GCGAGGCAGTGCTTCGCTGG
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 103; Mature: 103
Protein sequence:
>103_residues MESSWGRSTAADRLQAGSQRGERSTREHVGTQLADQAGGASVQFTPRAGSGRIGEEVTAASPTAGALAARASRTARILSL AAVSASRSACPHCARLLLCWPEG
Sequences:
>Translated_103_residues MESSWGRSTAADRLQAGSQRGERSTREHVGTQLADQAGGASVQFTPRAGSGRIGEEVTAASPTAGALAARASRTARILSL AAVSASRSACPHCARLLLCWPEG >Mature_103_residues MESSWGRSTAADRLQAGSQRGERSTREHVGTQLADQAGGASVQFTPRAGSGRIGEEVTAASPTAGALAARASRTARILSL AAVSASRSACPHCARLLLCWPEG
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 10578; Mature: 10578
Theoretical pI: Translated: 10.27; Mature: 10.27
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.9 %Cys (Translated Protein) 1.0 %Met (Translated Protein) 3.9 %Cys+Met (Translated Protein) 2.9 %Cys (Mature Protein) 1.0 %Met (Mature Protein) 3.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MESSWGRSTAADRLQAGSQRGERSTREHVGTQLADQAGGASVQFTPRAGSGRIGEEVTAA CCCCCCCCHHHHHHHHHHHCCCHHHHHHHHHHHHHHCCCCCEEECCCCCCCCCCCCCCCC SPTAGALAARASRTARILSLAAVSASRSACPHCARLLLCWPEG CCCHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHEECCCC >Mature Secondary Structure MESSWGRSTAADRLQAGSQRGERSTREHVGTQLADQAGGASVQFTPRAGSGRIGEEVTAA CCCCCCCCHHHHHHHHHHHCCCHHHHHHHHHHHHHHCCCCCEEECCCCCCCCCCCCCCCC SPTAGALAARASRTARILSLAAVSASRSACPHCARLLLCWPEG CCCHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHEECCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA