Definition Thermomicrobium roseum DSM 5159 plasmid unnamed, complete sequence.
Accession NC_011961
Length 917,738

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The map label for this gene is 221635805

Identifier: 221635805

GI number: 221635805

Start: 387200

End: 387511

Strand: Reverse

Name: 221635805

Synonym: trd_A0399

Alternate gene names: NA

Gene position: 387511-387200 (Counterclockwise)

Preceding gene: 221635806

Following gene: 221635802

Centisome position: 42.22

GC content: 69.55

Gene sequence:

>312_bases
TTGGAGAGCAGCTGGGGTCGATCCACGGCCGCGGATCGACTCCAGGCGGGTTCGCAGCGCGGAGAGCGCAGCACGCGAGA
GCATGTCGGCACCCAACTCGCGGACCAGGCAGGCGGCGCGAGTGTTCAGTTCACCCCTCGAGCCGGCAGTGGCCGCATCG
GTGAGGAGGTCACCGCAGCCTCTCCGACGGCTGGAGCGCTCGCGGCTCGCGCCAGCCGGACGGCCCGCATCCTGAGCCTG
GCAGCGGTCTCAGCGTCTCGCAGCGCTTGCCCACACTGTGCTCGTCTACTCTTGTGCTGGCCAGAGGGATGA

Upstream 100 bases:

>100_bases
ATGCCATCGGCGTGCACCTGAGCGAGCTCCCCATCACGCCCGAGCGCGTGCTCGCTGCACTGCGCGACAAAGCAGTGAGT
TGAGCGAGTAAGGTATCCAA

Downstream 100 bases:

>100_bases
ACAAGCTCCCTCTTCACCTGAGGGAGCCCACTGGGCACCTGTCGTCGGCATCCGCTGATCGGCGAGGGGGTATCTGGTTG
GCGAGGCAGTGCTTCGCTGG

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 103; Mature: 103

Protein sequence:

>103_residues
MESSWGRSTAADRLQAGSQRGERSTREHVGTQLADQAGGASVQFTPRAGSGRIGEEVTAASPTAGALAARASRTARILSL
AAVSASRSACPHCARLLLCWPEG

Sequences:

>Translated_103_residues
MESSWGRSTAADRLQAGSQRGERSTREHVGTQLADQAGGASVQFTPRAGSGRIGEEVTAASPTAGALAARASRTARILSL
AAVSASRSACPHCARLLLCWPEG
>Mature_103_residues
MESSWGRSTAADRLQAGSQRGERSTREHVGTQLADQAGGASVQFTPRAGSGRIGEEVTAASPTAGALAARASRTARILSL
AAVSASRSACPHCARLLLCWPEG

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 10578; Mature: 10578

Theoretical pI: Translated: 10.27; Mature: 10.27

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.9 %Cys     (Translated Protein)
1.0 %Met     (Translated Protein)
3.9 %Cys+Met (Translated Protein)
2.9 %Cys     (Mature Protein)
1.0 %Met     (Mature Protein)
3.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MESSWGRSTAADRLQAGSQRGERSTREHVGTQLADQAGGASVQFTPRAGSGRIGEEVTAA
CCCCCCCCHHHHHHHHHHHCCCHHHHHHHHHHHHHHCCCCCEEECCCCCCCCCCCCCCCC
SPTAGALAARASRTARILSLAAVSASRSACPHCARLLLCWPEG
CCCHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHEECCCC
>Mature Secondary Structure
MESSWGRSTAADRLQAGSQRGERSTREHVGTQLADQAGGASVQFTPRAGSGRIGEEVTAA
CCCCCCCCHHHHHHHHHHHCCCHHHHHHHHHHHHHHCCCCCEEECCCCCCCCCCCCCCCC
SPTAGALAARASRTARILSLAAVSASRSACPHCARLLLCWPEG
CCCHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHEECCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA