| Definition | Thermomicrobium roseum DSM 5159 plasmid unnamed, complete sequence. |
|---|---|
| Accession | NC_011961 |
| Length | 917,738 |
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The map label for this gene is merA [H]
Identifier: 221635786
GI number: 221635786
Start: 365005
End: 366687
Strand: Reverse
Name: merA [H]
Synonym: trd_A0380
Alternate gene names: 221635786
Gene position: 366687-365005 (Counterclockwise)
Preceding gene: 221635787
Following gene: 221635783
Centisome position: 39.96
GC content: 67.38
Gene sequence:
>1683_bases ATGACACCAGCGAACCACGAATCGGCCCTCGTCACGTACGAACTCGACGTGGAAGGGATGACCTGCCGGGATTGTGAGCG GCACGTCGAGACAGCTGTCGAGGCCTCTGGCGGTATCGAGCCGCGAGCGGACTGGCGACGCCGTCGCGTCCGCTTCGCTG CCCCGCCCACTTTCGACCCCCAACCTGTCTTCGCTGCCATTCGTGCTGCTAGCGGACAACTGCATCGGTACGAGCCAGGG CAACTGCGGCGCCTGGCGCCTGTCCAGCTGGACGATGAGTCACCCGACGCTGATGCCGACCTGGTGATCATCGGCGGTGG CTCAGCCGCCTTCGCTGCCGCGATCGAGGCCCACCAGCTCGGTGCCCGCGTCATCATGATCGAACGTGGCACGCTGGGTG GAACCTGCGTCAACATCGGGTGCGTCCCCTCCAAGTTCTTGCTGCGTGCCGCCGAAGTCGCTCATCTGGCTGCGACGCGC CGCTATCGCGGGATCCGCAGCCAACTCGAGGCAGTCGATCTGGCAGCCCATGTCGCGCAGAAGCAGGACCTGATCGCCGC ACTGCGGCGCGAAAAGTACGAGGAACTCGTCGACTACTACGGTTGGGAACTCCTACACGGTACGGCCCGTTTCGTCGATC CGCAGACAATCGCTGTCGGCGACCGCCTGATCCGCGCACGTGCCTTTCTGATCGCCACCGGGGCCAGTCCGGCTCTCCCG CCGCTGCCTGGCCTCGCCGAGACGCCGTTCTTGACGAGCACGAGCGCGCTCGACCTGGAGCGCGTACCGACCTCGCTGCT CGTGCTCGGTGCTGGGTACGTGGCCCTGGAACTCGGCCAAGCGTTCCAGCGGCTCGGCAGTCGCGTCACTCTCGTACAGC GGCGAGCTCGGCTCTTGCCAGAAATCGAACTGAAGCTGGCCGAGCAACTCCAGCAGGCGCTCGCTGCGGAAGGGATCCGG TTCCGCCTCGGCGTGCTCCCGCAGCGGGTCGAGCGCGTTCCTGGCGGCGTACGCCTCATCGTGCAGACCAGTGATGGTCG CGAAGAAGCGCTCGAGGCTGAAACGCTGCTCGTGGCGACGGGACGCCGGCCGAACGTGGACGACCTCGATCTCGCTGCCG CCGGTGTGGAACTCGACGCTCGGGGAGCCCCCAGACTCGATCCGACGCTCCGGACGACGAATCCCCGCATCTACGCCGCG GGTGACGTGACGCTCGGCCCGCAGTTCGTGTATGTGGCAGCCGCGCAGGGCCGCCTGGCAGCTCGCAACGCGCTCCTCGG AGAGCAGCAAATCCTGCGCCTCGATGCCGTACCAGCCGTCATCTTCACGCAGCCCCAGCTGGCCAGCGTCGGGCTGACCC GAGCAGATGCCGAGGCGCGCGGGCATCGGGTCGTGACCGGCTTCGCTCCCGCGTCCGTGATCGCCCGCGAACGGGTCGAG CTGCAACCGTTCGGCGGGGTGTTCCTGGTCGCTGATGCCGAGAGCGGGCGCATACTGGGTGTTCAGGCACTCGCCAGCGC TGCCGGGGAACTGATCGAAGCAGCGACTCTGGCTGTCCATGCTGGGCTGACGCTCGCCGACCTCCGCGAGCATCTCGCCC CCTACCTCACGGTTGGAGAGGGGCTGCGCTTAGCTGCGCTGGCTGTCGAGCAGGATCCCGCGCGCCTCTCATGTTGTGCG TGA
Upstream 100 bases:
>100_bases TGAGCCGATCGACCTGCCGTGCTCGAGCTGCGTTGCGGACCGAGCAGGCTGGCCTCGGCGAGTTCGCGCCCTGTGCCGAC ATCGCGAAGGAGGAAGGACG
Downstream 100 bases:
>100_bases GGAAGCGACGCATCATCGCCCGCCCACTCGGGTCGTTTCCCGGGCCGAGCACTGGCAACTGCGCACGAGTGGAAGCGCAT GCTCGGGCATCGCTGTCGCA
Product: mercuric reductase
Products: NA
Alternate protein names: Hg(II) reductase [H]
Number of amino acids: Translated: 560; Mature: 559
Protein sequence:
>560_residues MTPANHESALVTYELDVEGMTCRDCERHVETAVEASGGIEPRADWRRRRVRFAAPPTFDPQPVFAAIRAASGQLHRYEPG QLRRLAPVQLDDESPDADADLVIIGGGSAAFAAAIEAHQLGARVIMIERGTLGGTCVNIGCVPSKFLLRAAEVAHLAATR RYRGIRSQLEAVDLAAHVAQKQDLIAALRREKYEELVDYYGWELLHGTARFVDPQTIAVGDRLIRARAFLIATGASPALP PLPGLAETPFLTSTSALDLERVPTSLLVLGAGYVALELGQAFQRLGSRVTLVQRRARLLPEIELKLAEQLQQALAAEGIR FRLGVLPQRVERVPGGVRLIVQTSDGREEALEAETLLVATGRRPNVDDLDLAAAGVELDARGAPRLDPTLRTTNPRIYAA GDVTLGPQFVYVAAAQGRLAARNALLGEQQILRLDAVPAVIFTQPQLASVGLTRADAEARGHRVVTGFAPASVIARERVE LQPFGGVFLVADAESGRILGVQALASAAGELIEAATLAVHAGLTLADLREHLAPYLTVGEGLRLAALAVEQDPARLSCCA
Sequences:
>Translated_560_residues MTPANHESALVTYELDVEGMTCRDCERHVETAVEASGGIEPRADWRRRRVRFAAPPTFDPQPVFAAIRAASGQLHRYEPG QLRRLAPVQLDDESPDADADLVIIGGGSAAFAAAIEAHQLGARVIMIERGTLGGTCVNIGCVPSKFLLRAAEVAHLAATR RYRGIRSQLEAVDLAAHVAQKQDLIAALRREKYEELVDYYGWELLHGTARFVDPQTIAVGDRLIRARAFLIATGASPALP PLPGLAETPFLTSTSALDLERVPTSLLVLGAGYVALELGQAFQRLGSRVTLVQRRARLLPEIELKLAEQLQQALAAEGIR FRLGVLPQRVERVPGGVRLIVQTSDGREEALEAETLLVATGRRPNVDDLDLAAAGVELDARGAPRLDPTLRTTNPRIYAA GDVTLGPQFVYVAAAQGRLAARNALLGEQQILRLDAVPAVIFTQPQLASVGLTRADAEARGHRVVTGFAPASVIARERVE LQPFGGVFLVADAESGRILGVQALASAAGELIEAATLAVHAGLTLADLREHLAPYLTVGEGLRLAALAVEQDPARLSCCA >Mature_559_residues TPANHESALVTYELDVEGMTCRDCERHVETAVEASGGIEPRADWRRRRVRFAAPPTFDPQPVFAAIRAASGQLHRYEPGQ LRRLAPVQLDDESPDADADLVIIGGGSAAFAAAIEAHQLGARVIMIERGTLGGTCVNIGCVPSKFLLRAAEVAHLAATRR YRGIRSQLEAVDLAAHVAQKQDLIAALRREKYEELVDYYGWELLHGTARFVDPQTIAVGDRLIRARAFLIATGASPALPP LPGLAETPFLTSTSALDLERVPTSLLVLGAGYVALELGQAFQRLGSRVTLVQRRARLLPEIELKLAEQLQQALAAEGIRF RLGVLPQRVERVPGGVRLIVQTSDGREEALEAETLLVATGRRPNVDDLDLAAAGVELDARGAPRLDPTLRTTNPRIYAAG DVTLGPQFVYVAAAQGRLAARNALLGEQQILRLDAVPAVIFTQPQLASVGLTRADAEARGHRVVTGFAPASVIARERVEL QPFGGVFLVADAESGRILGVQALASAAGELIEAATLAVHAGLTLADLREHLAPYLTVGEGLRLAALAVEQDPARLSCCA
Specific function: Resistance to Hg(2+) in bacteria appears to be governed by a specialized system which includes mercuric reductase. MerA protein is responsible for volatilizing mercury as Hg(0) [H]
COG id: COG1249
COG function: function code C; Pyruvate/2-oxoglutarate dehydrogenase complex, dihydrolipoamide dehydrogenase (E3) component, and related enzymes
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 2 HMA domains [H]
Homologues:
Organism=Homo sapiens, GI91199540, Length=494, Percent_Identity=31.1740890688259, Blast_Score=228, Evalue=2e-59, Organism=Homo sapiens, GI50301238, Length=459, Percent_Identity=28.9760348583878, Blast_Score=154, Evalue=3e-37, Organism=Homo sapiens, GI22035672, Length=464, Percent_Identity=30.3879310344828, Blast_Score=139, Evalue=5e-33, Organism=Homo sapiens, GI148277071, Length=505, Percent_Identity=28.9108910891089, Blast_Score=139, Evalue=5e-33, Organism=Homo sapiens, GI148277065, Length=505, Percent_Identity=28.9108910891089, Blast_Score=139, Evalue=7e-33, Organism=Homo sapiens, GI33519430, Length=473, Percent_Identity=28.9640591966173, Blast_Score=131, Evalue=1e-30, Organism=Homo sapiens, GI33519428, Length=473, Percent_Identity=28.9640591966173, Blast_Score=131, Evalue=1e-30, Organism=Homo sapiens, GI33519426, Length=473, Percent_Identity=28.9640591966173, Blast_Score=131, Evalue=1e-30, Organism=Homo sapiens, GI291045266, Length=499, Percent_Identity=27.2545090180361, Blast_Score=122, Evalue=7e-28, Organism=Homo sapiens, GI291045268, Length=494, Percent_Identity=26.5182186234818, Blast_Score=109, Evalue=7e-24, Organism=Escherichia coli, GI1786307, Length=467, Percent_Identity=30.1927194860814, Blast_Score=190, Evalue=2e-49, Organism=Escherichia coli, GI87081717, Length=451, Percent_Identity=30.3769401330377, Blast_Score=188, Evalue=7e-49, Organism=Escherichia coli, GI87082354, Length=464, Percent_Identity=29.0948275862069, Blast_Score=171, Evalue=1e-43, Organism=Escherichia coli, GI1789915, Length=436, Percent_Identity=29.3577981651376, Blast_Score=168, Evalue=7e-43, Organism=Escherichia coli, GI1789065, Length=235, Percent_Identity=31.4893617021277, Blast_Score=62, Evalue=8e-11, Organism=Caenorhabditis elegans, GI32565766, Length=481, Percent_Identity=32.8482328482328, Blast_Score=227, Evalue=2e-59, Organism=Caenorhabditis elegans, GI17557007, Length=497, Percent_Identity=28.7726358148893, Blast_Score=156, Evalue=2e-38, Organism=Caenorhabditis elegans, GI71982272, Length=511, Percent_Identity=28.7671232876712, Blast_Score=151, Evalue=8e-37, Organism=Caenorhabditis elegans, GI71983429, Length=353, Percent_Identity=30.8781869688385, Blast_Score=142, Evalue=5e-34, Organism=Caenorhabditis elegans, GI71983419, Length=353, Percent_Identity=30.8781869688385, Blast_Score=142, Evalue=5e-34, Organism=Saccharomyces cerevisiae, GI6321091, Length=476, Percent_Identity=31.5126050420168, Blast_Score=208, Evalue=2e-54, Organism=Saccharomyces cerevisiae, GI6325240, Length=478, Percent_Identity=28.6610878661088, Blast_Score=148, Evalue=2e-36, Organism=Saccharomyces cerevisiae, GI6325166, Length=460, Percent_Identity=25.6521739130435, Blast_Score=131, Evalue=3e-31, Organism=Drosophila melanogaster, GI21358499, Length=475, Percent_Identity=31.5789473684211, Blast_Score=223, Evalue=2e-58, Organism=Drosophila melanogaster, GI24640549, Length=510, Percent_Identity=31.9607843137255, Blast_Score=179, Evalue=4e-45, Organism=Drosophila melanogaster, GI24640551, Length=506, Percent_Identity=31.4229249011858, Blast_Score=179, Evalue=5e-45, Organism=Drosophila melanogaster, GI24640553, Length=497, Percent_Identity=31.9919517102616, Blast_Score=178, Evalue=8e-45, Organism=Drosophila melanogaster, GI17737741, Length=504, Percent_Identity=30.3571428571429, Blast_Score=165, Evalue=6e-41,
Paralogues:
None
Copy number: 380 Molecules/Cell In: Growth Phase, Minimal Media (Based on E. coli). 160 Molecules/Cell In: Growth Phase, Minimal Media (Based on E. coli). 1880 Molecules/Cell In: Stationary Phase, Rich Media (Based on E. coli). 6,000 Molecules/Cell In: Glucose minimal
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR016156 - InterPro: IPR013027 - InterPro: IPR017969 - InterPro: IPR006121 - InterPro: IPR000815 - InterPro: IPR021179 - InterPro: IPR004099 - InterPro: IPR012999 - InterPro: IPR001327 [H]
Pfam domain/function: PF00403 HMA; PF00070 Pyr_redox; PF07992 Pyr_redox_2; PF02852 Pyr_redox_dim [H]
EC number: =1.16.1.1 [H]
Molecular weight: Translated: 59917; Mature: 59786
Theoretical pI: Translated: 6.05; Mature: 6.05
Prosite motif: PS00076 PYRIDINE_REDOX_1 ; PS50846 HMA_2
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.1 %Cys (Translated Protein) 0.5 %Met (Translated Protein) 1.6 %Cys+Met (Translated Protein) 1.1 %Cys (Mature Protein) 0.4 %Met (Mature Protein) 1.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTPANHESALVTYELDVEGMTCRDCERHVETAVEASGGIEPRADWRRRRVRFAAPPTFDP CCCCCCCCEEEEEEEECCCCCHHHHHHHHHHHHHHCCCCCCCHHHHHCCEEECCCCCCCC QPVFAAIRAASGQLHRYEPGQLRRLAPVQLDDESPDADADLVIIGGGSAAFAAAIEAHQL CHHHHHHHHCCCCCCCCCCCHHCEECCEEECCCCCCCCCCEEEECCCCHHHHHHHHHHHC GARVIMIERGTLGGTCVNIGCVPSKFLLRAAEVAHLAATRRYRGIRSQLEAVDLAAHVAQ CCEEEEEECCCCCCEEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH KQDLIAALRREKYEELVDYYGWELLHGTARFVDPQTIAVGDRLIRARAFLIATGASPALP HHHHHHHHHHHHHHHHHHHHCHHHCCCHHHHCCCCEEHHHHHHHHHEEEEEEECCCCCCC PLPGLAETPFLTSTSALDLERVPTSLLVLGAGYVALELGQAFQRLGSRVTLVQRRARLLP CCCCCCCCCCCCCCCCCCHHHCCCEEEEECCCHHHHHHHHHHHHHCCHHHHHHHHHHHCC EIELKLAEQLQQALAAEGIRFRLGVLPQRVERVPGGVRLIVQTSDGREEALEAETLLVAT HHHHHHHHHHHHHHHHCCCEEEECCCHHHHHHCCCCEEEEEECCCCHHHHHHHCEEEEEC GRRPNVDDLDLAAAGVELDARGAPRLDPTLRTTNPRIYAAGDVTLGPQFVYVAAAQGRLA CCCCCCCCCHHHEECEEEECCCCCCCCCCEECCCCEEEEECCCEECCCEEEEEECCCCHH ARNALLGEQQILRLDAVPAVIFTQPQLASVGLTRADAEARGHRVVTGFAPASVIARERVE HHHHHCCHHHHHHHHCCCEEEECCCCHHHCCCEECCCCCCCCEEEEECCCHHHHHHHCEE LQPFGGVFLVADAESGRILGVQALASAAGELIEAATLAVHAGLTLADLREHLAPYLTVGE ECCCCCEEEEEECCCCCEEEHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHCCEEECCC GLRLAALAVEQDPARLSCCA CCEEEEEEECCCCCCCCCCC >Mature Secondary Structure TPANHESALVTYELDVEGMTCRDCERHVETAVEASGGIEPRADWRRRRVRFAAPPTFDP CCCCCCCEEEEEEEECCCCCHHHHHHHHHHHHHHCCCCCCCHHHHHCCEEECCCCCCCC QPVFAAIRAASGQLHRYEPGQLRRLAPVQLDDESPDADADLVIIGGGSAAFAAAIEAHQL CHHHHHHHHCCCCCCCCCCCHHCEECCEEECCCCCCCCCCEEEECCCCHHHHHHHHHHHC GARVIMIERGTLGGTCVNIGCVPSKFLLRAAEVAHLAATRRYRGIRSQLEAVDLAAHVAQ CCEEEEEECCCCCCEEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH KQDLIAALRREKYEELVDYYGWELLHGTARFVDPQTIAVGDRLIRARAFLIATGASPALP HHHHHHHHHHHHHHHHHHHHCHHHCCCHHHHCCCCEEHHHHHHHHHEEEEEEECCCCCCC PLPGLAETPFLTSTSALDLERVPTSLLVLGAGYVALELGQAFQRLGSRVTLVQRRARLLP CCCCCCCCCCCCCCCCCCHHHCCCEEEEECCCHHHHHHHHHHHHHCCHHHHHHHHHHHCC EIELKLAEQLQQALAAEGIRFRLGVLPQRVERVPGGVRLIVQTSDGREEALEAETLLVAT HHHHHHHHHHHHHHHHCCCEEEECCCHHHHHHCCCCEEEEEECCCCHHHHHHHCEEEEEC GRRPNVDDLDLAAAGVELDARGAPRLDPTLRTTNPRIYAAGDVTLGPQFVYVAAAQGRLA CCCCCCCCCHHHEECEEEECCCCCCCCCCEECCCCEEEEECCCEECCCEEEEEECCCCHH ARNALLGEQQILRLDAVPAVIFTQPQLASVGLTRADAEARGHRVVTGFAPASVIARERVE HHHHHCCHHHHHHHHCCCEEEECCCCHHHCCCEECCCCCCCCEEEEECCCHHHHHHHCEE LQPFGGVFLVADAESGRILGVQALASAAGELIEAATLAVHAGLTLADLREHLAPYLTVGE ECCCCCEEEEEECCCCCEEEHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHCCEEECCC GLRLAALAVEQDPARLSCCA CCEEEEEEECCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 2536669; 10559175; 2067577 [H]