| Definition | Thermomicrobium roseum DSM 5159 plasmid unnamed, complete sequence. |
|---|---|
| Accession | NC_011961 |
| Length | 917,738 |
Click here to switch to the map view.
The map label for this gene is mrpB [H]
Identifier: 221635780
GI number: 221635780
Start: 359725
End: 360147
Strand: Reverse
Name: mrpB [H]
Synonym: trd_A0374
Alternate gene names: 221635780
Gene position: 360147-359725 (Counterclockwise)
Preceding gene: 221635781
Following gene: 221635779
Centisome position: 39.24
GC content: 61.47
Gene sequence:
>423_bases GTGAGTACCCTTCCCTCGATCATCTTGCGAACAGCCGTCCGCTGGATCTCACCGCTTCTCTTGCTTTTCAGCCTCTTCCT GCTGTTGCGCGGACATCACGAGCCAGGTGGCGGCTTCGCTGGTGGTTTGATCGCATCGACCGGCTTCGCCCTCCTCACTT TCGGTTATAGCCTGCGCACAGCCCAGCGACTCCTCCGCGTGCAACCACTGACGTTGGTCGCCATTGGCCTCGCGTTCGCC GCGGCGAGCGGGCTCTTCGCCTGGATCAACAGGACATCCTTCCTCACCGGCCTCTGGATCGGCGTGCCTCTTCCCGGCAA TCTCCGCGTCGATCTCGGCACACCGCTCCTTTTCGATATCGGGGTGTACCTGACAGTCATCGGCGCGACGTTGACCATGC TCTTCGCTTTCGCTGAGGAGTGA
Upstream 100 bases:
>100_bases TCCGTGCCCTGGACACGCTCGGTGAGATCACCGTGCTGGGCTTGGCCGGTCTCGGAGTGACAGCCTTGCTTTACCGGCGT CGGCAGAAGGAGGAAGGAAC
Downstream 100 bases:
>100_bases ACGATGGAACTTTTCTTCGTCGCGATGATCGGTGTCCTGTACGGCGCTGGGTTGTACCTTTTGTTGCGCCGCAGCATCGT CAAGATGCTCGTCGGCCTGA
Product: cation:proton antiporter, putative
Products: NA
Alternate protein names: Mrp complex subunit B; Multiple resistance and pH homeostasis protein B [H]
Number of amino acids: Translated: 140; Mature: 139
Protein sequence:
>140_residues MSTLPSIILRTAVRWISPLLLLFSLFLLLRGHHEPGGGFAGGLIASTGFALLTFGYSLRTAQRLLRVQPLTLVAIGLAFA AASGLFAWINRTSFLTGLWIGVPLPGNLRVDLGTPLLFDIGVYLTVIGATLTMLFAFAEE
Sequences:
>Translated_140_residues MSTLPSIILRTAVRWISPLLLLFSLFLLLRGHHEPGGGFAGGLIASTGFALLTFGYSLRTAQRLLRVQPLTLVAIGLAFA AASGLFAWINRTSFLTGLWIGVPLPGNLRVDLGTPLLFDIGVYLTVIGATLTMLFAFAEE >Mature_139_residues STLPSIILRTAVRWISPLLLLFSLFLLLRGHHEPGGGFAGGLIASTGFALLTFGYSLRTAQRLLRVQPLTLVAIGLAFAA ASGLFAWINRTSFLTGLWIGVPLPGNLRVDLGTPLLFDIGVYLTVIGATLTMLFAFAEE
Specific function: Mrp complex is a Na(+)/H(+) antiporter that is considered to be the major Na(+) excretion system in B.subtilis. Has a major role in Na(+) resistance and a minor role in Na(+)- and K(+)-dependent pH homeostasis as compared to TetB. MrpA may be the actual N
COG id: COG2111
COG function: function code P; Multisubunit Na+/H+ antiporter, MnhB subunit
Gene ontology:
Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the CPA3 antiporters (TC 2.A.63) subunit B family [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR005281 - InterPro: IPR007182 [H]
Pfam domain/function: PF04039 MnhB [H]
EC number: NA
Molecular weight: Translated: 15015; Mature: 14884
Theoretical pI: Translated: 10.99; Mature: 10.99
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 1.4 %Met (Translated Protein) 1.4 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 0.7 %Met (Mature Protein) 0.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSTLPSIILRTAVRWISPLLLLFSLFLLLRGHHEPGGGFAGGLIASTGFALLTFGYSLRT CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHH AQRLLRVQPLTLVAIGLAFAAASGLFAWINRTSFLTGLWIGVPLPGNLRVDLGTPLLFDI HHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEECCCCCCCEEEECCCCHHHHH GVYLTVIGATLTMLFAFAEE HHHHHHHHHHHHHHHHHHCC >Mature Secondary Structure STLPSIILRTAVRWISPLLLLFSLFLLLRGHHEPGGGFAGGLIASTGFALLTFGYSLRT CCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHH AQRLLRVQPLTLVAIGLAFAAASGLFAWINRTSFLTGLWIGVPLPGNLRVDLGTPLLFDI HHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEECCCCCCCEEEECCCCHHHHH GVYLTVIGATLTMLFAFAEE HHHHHHHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 7.0
TargetDB status: NA
Availability: NA
References: 9274030; 9384377; 10198001; 11356194 [H]