| Definition | Thermomicrobium roseum DSM 5159 plasmid unnamed, complete sequence. |
|---|---|
| Accession | NC_011961 |
| Length | 917,738 |
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The map label for this gene is 221635766
Identifier: 221635766
GI number: 221635766
Start: 349473
End: 349955
Strand: Reverse
Name: 221635766
Synonym: trd_A0360
Alternate gene names: NA
Gene position: 349955-349473 (Counterclockwise)
Preceding gene: 221635767
Following gene: 221635765
Centisome position: 38.13
GC content: 63.35
Gene sequence:
>483_bases ATGGCTACACGGAGCCTGAACCACGTCAGCATCGTCGCTGAGCATCTCGAGGAGTCGGTGCGTTTCTACGAAGAGGTCTT CGGTCTGGAGCGGATCCCAACACCCAATTTCGGGCATCCGGTGCAATGGCTGCGGGTCGGTGACCTCCAGCTCCACATCT TCGAACGACCGGAAGAAGCACGCCGCTACGCGCATTTCGCACTGACCGTTGACGATCTCGTCACGGTCTACGAGAAGGCA CGCGCCCGCGGCTGCCTGGACGGCGATACCTTCACGCATTTCCTCGTCCAGTTGCCCAACGGGAACGTCCAGCTCTACGT GCGCGACCCAGCTGGCAATCTGATCGAGGTCGACTGGCCCGACATCGCATCGCTCCCCGCGGAACTCCAGGCCCAGTGCG TGCGGCTCGAGGACCGGTACCCGCAGAGCGACTGGAATCGCCAGGCGACCCTGTTCCTGGAGCCGATCGGATCGCGCGCG TGA
Upstream 100 bases:
>100_bases GCGCGTCTCCCAGCCTGCTTCCGCCGGCCCTCTGCTCCGTGCTACGCTTCAGGTGCTTCTGAGCGTCGGGTGGATGACGG AACCAGAGGGAGCAGGCCCA
Downstream 100 bases:
>100_bases GGACAGTTTCGCCGGCGGAGCCCACGCTGCGACGATGATGACAGCCGTCTCGCCGTCCGTTCGGCGAGTCGACGTCTGGT ATTCTCTTCGATCCACTTCC
Product: glyoxalase family protein
Products: NA
Alternate protein names: Glyoxalase Family Protein
Number of amino acids: Translated: 160; Mature: 159
Protein sequence:
>160_residues MATRSLNHVSIVAEHLEESVRFYEEVFGLERIPTPNFGHPVQWLRVGDLQLHIFERPEEARRYAHFALTVDDLVTVYEKA RARGCLDGDTFTHFLVQLPNGNVQLYVRDPAGNLIEVDWPDIASLPAELQAQCVRLEDRYPQSDWNRQATLFLEPIGSRA
Sequences:
>Translated_160_residues MATRSLNHVSIVAEHLEESVRFYEEVFGLERIPTPNFGHPVQWLRVGDLQLHIFERPEEARRYAHFALTVDDLVTVYEKA RARGCLDGDTFTHFLVQLPNGNVQLYVRDPAGNLIEVDWPDIASLPAELQAQCVRLEDRYPQSDWNRQATLFLEPIGSRA >Mature_159_residues ATRSLNHVSIVAEHLEESVRFYEEVFGLERIPTPNFGHPVQWLRVGDLQLHIFERPEEARRYAHFALTVDDLVTVYEKAR ARGCLDGDTFTHFLVQLPNGNVQLYVRDPAGNLIEVDWPDIASLPAELQAQCVRLEDRYPQSDWNRQATLFLEPIGSRA
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 18399; Mature: 18268
Theoretical pI: Translated: 4.86; Mature: 4.86
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.2 %Cys (Translated Protein) 0.6 %Met (Translated Protein) 1.9 %Cys+Met (Translated Protein) 1.3 %Cys (Mature Protein) 0.0 %Met (Mature Protein) 1.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MATRSLNHVSIVAEHLEESVRFYEEVFGLERIPTPNFGHPVQWLRVGDLQLHIFERPEEA CCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCEEEEEECCEEEEEECCCHHH RRYAHFALTVDDLVTVYEKARARGCLDGDTFTHFLVQLPNGNVQLYVRDPAGNLIEVDWP HHHHHHEEEHHHHHHHHHHHHHCCCCCCCHHEEEEEECCCCCEEEEEECCCCCEEEECCC DIASLPAELQAQCVRLEDRYPQSDWNRQATLFLEPIGSRA CHHCCCHHHHHHHHHHHCCCCCCCCCCEEEEEEECCCCCC >Mature Secondary Structure ATRSLNHVSIVAEHLEESVRFYEEVFGLERIPTPNFGHPVQWLRVGDLQLHIFERPEEA CCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCEEEEEECCEEEEEECCCHHH RRYAHFALTVDDLVTVYEKARARGCLDGDTFTHFLVQLPNGNVQLYVRDPAGNLIEVDWP HHHHHHEEEHHHHHHHHHHHHHCCCCCCCHHEEEEEECCCCCEEEEEECCCCCEEEECCC DIASLPAELQAQCVRLEDRYPQSDWNRQATLFLEPIGSRA CHHCCCHHHHHHHHHHHCCCCCCCCCCEEEEEEECCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA