Definition Thermomicrobium roseum DSM 5159 plasmid unnamed, complete sequence.
Accession NC_011961
Length 917,738

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The map label for this gene is 221635721

Identifier: 221635721

GI number: 221635721

Start: 301557

End: 302822

Strand: Reverse

Name: 221635721

Synonym: trd_A0314

Alternate gene names: NA

Gene position: 302822-301557 (Counterclockwise)

Preceding gene: 221635723

Following gene: 221635718

Centisome position: 33.0

GC content: 66.43

Gene sequence:

>1266_bases
GTGACCGCTGACCGTCCAGCTGCACCATCCGGAGAGACATCGCGACTGGCGCGCTTGCACGCCGCTCTCACCGCGAGCGC
GCTCGCGGTGCCAGCCTACCGACGTTATTGGGCCGGCATGCTCGTTTCCAACATCGGGAGCTGGCTCCAACTCGTTGCCC
AGGGATGGCTCATCCTGGCGCTCACCGGCTCGCCAGCCTATCTGGGCCTGTACGGCCTCTTGCGCTCCATTCCGACCCTG
ACGATCACGCTGGTTGGCGGGGCAGTCGCCGACCGGGTCGATCGGCGCCGAATCCTGCTCGTCACCCAGTCGTTGGCCGC
CCTGCTCGCGCTGCTTCTCGGAATCCTCGATCTCACCGGGACGATCAGACCGTGGCAAATTCTGGCGATCGCATTCGCTA
CCGCGACCGTCATGGCGTTCGACAATCCGGCGCGCCAGGCCATGGTTCCTGGTCTCGTGGGGAACGACCGAGTCGCTTCT
GCCGTCGGTTTGAACTCCGCTGCGTGGAACGCGGCCGCAGTGATCGGCCCATCGCTGGCCGGCTTGCTGGTCGCTGCGGC
CGGCACCGGTTGGGCCTTCGTGCTCAACGGGGTGAGTTATCTTCCGGTACTCTGGGCCGTCTGGACAATCGCACCAGCAC
CTCCCGAGCGCACGAGCACGACTTCCCTGCTCGTCCACGTCCGCGTTGGCCTGCGGGCTGTCCGGCACGATCGGCGCCTG
CTCGGTCTGCTGACCTTGCTGGCCGTGCCCACCTTCCTCGGCCGCCCCTACCTGCAGCTCATGCCGGTTTTCGCCCGCGA
TATCCTGCACACCAGCGCCGCGGGATACGGTGCCCTCATGGGAATCAACGGAGTCGGCGCGTTGAGCGGGGCTCTGCTCG
TTGGGCGGCTGGGCGCACGCCAGGATCGCGGTCGCATTCTCTTCCTCGTCAACCTGGTCTTCGCCGCGACACTCGTTGGG
TTCGCGCTCTCACGTTGGCTCGAGCTCTCGGCGATCCTGCTCTTCCTCATCGGTGCCAGCCAGACGCTCCTCATGGCTCT
CACGAACACGCTCATCCAGCTGATCGTTCCGGACGAGTTCCGCGGCCGCGTGATGGCCCTCTACACGTTGATTCCGATGG
GCTTGATGCCACTGGGGACGATGGCGCTCGGCGGGATCGGGGATCTTTTCGGTGTGCCAGCCACGGTCGCGGTCGCCGCA
TCGGGTGCGCTCGTCTTCACGCTGGCCGGTCGCCGGCTCTTTCCCGAGGTCTACCGGCTCGCTTGA

Upstream 100 bases:

>100_bases
GGGATCGACTGCCACGCTCGTCCAGCATCTGTTATGCTGCCAGCCGGTTTCTCGATCGCGCCAGCGCCCGGCAAGGTCGG
CAGCGCGAAGGGATAGACGC

Downstream 100 bases:

>100_bases
CGTTCGCGATCCGGCTCGGGAGCGAGTTCTGCTCGCACGGTCGCGAGCTTCCCCTGACGCACGACTCCGAGCACGATCGT
GCTGCCGACCGGTGCGCGAC

Product: permease of the major facilitator superfamily

Products: NA

Alternate protein names: Facilitator Superfamily Protein; Integral Membrane Efflux Protein; Facilitator Superfamily Permease; Facilitator Superfamily Transporter; Transmembrane Efflux Protein; Multidrug ABC Transporter; MFS Permease; Permeases Of Facilitator Superfamily; Permease; Mfs Transporter; Transporter Facilitator Family; Arabinose Efflux Permease Family Protein; Permease Of Facilitator Superfamily; MFS Family Transporter; Permease Protein; Drug Resistance Efflux Protein; MFS Family Transporter Protein; Facilitator Superfamily; Transmembrane Protein; Arabinose Efflux Permease; Permease Of Facilitator Superfamily Protein; Facilitator MFS1 Protein; Permease Facilitator Superfamily; MFS Transporter; MFS Family Membrane Efflux Protein; Macrolide-Efflux Protein; Facilitator Superfamily Multidrug Efflux Transporter; Transporter Facilitator Family Protein; MFS Family Diterpenoid Transporter; Transport Transmembrane Protein; MFS Superfamily Transporter; Permeases Of Facilitator Superfamily Protein

Number of amino acids: Translated: 421; Mature: 420

Protein sequence:

>421_residues
MTADRPAAPSGETSRLARLHAALTASALAVPAYRRYWAGMLVSNIGSWLQLVAQGWLILALTGSPAYLGLYGLLRSIPTL
TITLVGGAVADRVDRRRILLVTQSLAALLALLLGILDLTGTIRPWQILAIAFATATVMAFDNPARQAMVPGLVGNDRVAS
AVGLNSAAWNAAAVIGPSLAGLLVAAAGTGWAFVLNGVSYLPVLWAVWTIAPAPPERTSTTSLLVHVRVGLRAVRHDRRL
LGLLTLLAVPTFLGRPYLQLMPVFARDILHTSAAGYGALMGINGVGALSGALLVGRLGARQDRGRILFLVNLVFAATLVG
FALSRWLELSAILLFLIGASQTLLMALTNTLIQLIVPDEFRGRVMALYTLIPMGLMPLGTMALGGIGDLFGVPATVAVAA
SGALVFTLAGRRLFPEVYRLA

Sequences:

>Translated_421_residues
MTADRPAAPSGETSRLARLHAALTASALAVPAYRRYWAGMLVSNIGSWLQLVAQGWLILALTGSPAYLGLYGLLRSIPTL
TITLVGGAVADRVDRRRILLVTQSLAALLALLLGILDLTGTIRPWQILAIAFATATVMAFDNPARQAMVPGLVGNDRVAS
AVGLNSAAWNAAAVIGPSLAGLLVAAAGTGWAFVLNGVSYLPVLWAVWTIAPAPPERTSTTSLLVHVRVGLRAVRHDRRL
LGLLTLLAVPTFLGRPYLQLMPVFARDILHTSAAGYGALMGINGVGALSGALLVGRLGARQDRGRILFLVNLVFAATLVG
FALSRWLELSAILLFLIGASQTLLMALTNTLIQLIVPDEFRGRVMALYTLIPMGLMPLGTMALGGIGDLFGVPATVAVAA
SGALVFTLAGRRLFPEVYRLA
>Mature_420_residues
TADRPAAPSGETSRLARLHAALTASALAVPAYRRYWAGMLVSNIGSWLQLVAQGWLILALTGSPAYLGLYGLLRSIPTLT
ITLVGGAVADRVDRRRILLVTQSLAALLALLLGILDLTGTIRPWQILAIAFATATVMAFDNPARQAMVPGLVGNDRVASA
VGLNSAAWNAAAVIGPSLAGLLVAAAGTGWAFVLNGVSYLPVLWAVWTIAPAPPERTSTTSLLVHVRVGLRAVRHDRRLL
GLLTLLAVPTFLGRPYLQLMPVFARDILHTSAAGYGALMGINGVGALSGALLVGRLGARQDRGRILFLVNLVFAATLVGF
ALSRWLELSAILLFLIGASQTLLMALTNTLIQLIVPDEFRGRVMALYTLIPMGLMPLGTMALGGIGDLFGVPATVAVAAS
GALVFTLAGRRLFPEVYRLA

Specific function: Unknown

COG id: COG0477

COG function: function code GEPR; Permeases of the major facilitator superfamily

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 44288; Mature: 44157

Theoretical pI: Translated: 11.80; Mature: 11.80

Prosite motif: PS50850 MFS

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
2.6 %Met     (Translated Protein)
2.6 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
2.4 %Met     (Mature Protein)
2.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTADRPAAPSGETSRLARLHAALTASALAVPAYRRYWAGMLVSNIGSWLQLVAQGWLILA
CCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEE
LTGSPAYLGLYGLLRSIPTLTITLVGGAVADRVDRRRILLVTQSLAALLALLLGILDLTG
ECCCCHHHHHHHHHHCCCCEEEEEECCHHHHHHCCCEEEEHHHHHHHHHHHHHHHHHHCC
TIRPWQILAIAFATATVMAFDNPARQAMVPGLVGNDRVASAVGLNSAAWNAAAVIGPSLA
CCCHHHHHHHHHHHHHHHCCCCCHHHHHCCCCCCCCHHHHHHCCCCCCCCHHHHHCHHHH
GLLVAAAGTGWAFVLNGVSYLPVLWAVWTIAPAPPERTSTTSLLVHVRVGLRAVRHDRRL
HHHHHHCCCCHHHHHCCHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHH
LGLLTLLAVPTFLGRPYLQLMPVFARDILHTSAAGYGALMGINGVGALSGALLVGRLGAR
HHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHCCCCCHHHCCCCCHHHHHHHHHHHHCCCC
QDRGRILFLVNLVFAATLVGFALSRWLELSAILLFLIGASQTLLMALTNTLIQLIVPDEF
CCCCCEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHCCCCHH
RGRVMALYTLIPMGLMPLGTMALGGIGDLFGVPATVAVAASGALVFTLAGRRLFPEVYRL
CCHHHHHHHHHHHHHHHHHHHHHCCCHHHHCCCHHHHHHCCCCEEEEECCCHHHHHHHHC
A
C
>Mature Secondary Structure 
TADRPAAPSGETSRLARLHAALTASALAVPAYRRYWAGMLVSNIGSWLQLVAQGWLILA
CCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEE
LTGSPAYLGLYGLLRSIPTLTITLVGGAVADRVDRRRILLVTQSLAALLALLLGILDLTG
ECCCCHHHHHHHHHHCCCCEEEEEECCHHHHHHCCCEEEEHHHHHHHHHHHHHHHHHHCC
TIRPWQILAIAFATATVMAFDNPARQAMVPGLVGNDRVASAVGLNSAAWNAAAVIGPSLA
CCCHHHHHHHHHHHHHHHCCCCCHHHHHCCCCCCCCHHHHHHCCCCCCCCHHHHHCHHHH
GLLVAAAGTGWAFVLNGVSYLPVLWAVWTIAPAPPERTSTTSLLVHVRVGLRAVRHDRRL
HHHHHHCCCCHHHHHCCHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHH
LGLLTLLAVPTFLGRPYLQLMPVFARDILHTSAAGYGALMGINGVGALSGALLVGRLGAR
HHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHCCCCCHHHCCCCCHHHHHHHHHHHHCCCC
QDRGRILFLVNLVFAATLVGFALSRWLELSAILLFLIGASQTLLMALTNTLIQLIVPDEF
CCCCCEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHCCCCHH
RGRVMALYTLIPMGLMPLGTMALGGIGDLFGVPATVAVAASGALVFTLAGRRLFPEVYRL
CCHHHHHHHHHHHHHHHHHHHHHCCCHHHHCCCHHHHHHCCCCEEEEECCCHHHHHHHHC
A
C

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA