Definition Thermomicrobium roseum DSM 5159 plasmid unnamed, complete sequence.
Accession NC_011961
Length 917,738

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The map label for this gene is 221635717

Identifier: 221635717

GI number: 221635717

Start: 298105

End: 299493

Strand: Reverse

Name: 221635717

Synonym: trd_A0311

Alternate gene names: NA

Gene position: 299493-298105 (Counterclockwise)

Preceding gene: 221635718

Following gene: 221635716

Centisome position: 32.63

GC content: 65.66

Gene sequence:

>1389_bases
ATGGCAGGTCCGGTGGTCGTTCCGGTACTCCCGACCTATCTCGATCCGGAGCGCGTGACTCACTGTGCGATTCCCTTCGG
TCGAGCGATCGCTCAGCGACTCGGGAGTGAACTCGTTCTCCTTTCCATTGTCGAGGTCACCGAATCCCTGCGCTCGTATC
TGGAAGCGGAGGGAGAGCAGGTCGAACAGTTGGTGCAGCGCTGGCTGGAACAGCGCCGCGCGTCGCTCGAACGGCTGCGG
AACGCGATCAGCGACGTGTCCTGTCGCATCGAGGTGCGCCTGGGCGAGCCGGCCAAGGAGATCGTCGCGTACGCCGATGC
GAGTCAGGCAGCGGTCATCGTCATGAGCAGCCACGGCCGCTTGGGTGTGGCCCGTTTGCTAGTGGGGAGCGTCACCTTCA
GCGTGATGCAGCGGGCGCGGCAACCGGCGCTCGTCGTGCGCGCTCGTGTACCCGTTCCAGCTCCCAACGCCTCGGTAACG
TTCTCGCCGGTTCTCGTCCCCCTCGATGGTTCAGCACTGGCCGAGGAGGCGATCGATACCGCGCTCGACCTGCTCGGTCA
GGGTTCGGAGCCCCTGCAGCTCCACCTCTTTCATGTCCTCGCCGAGGAAGAAGATCCCGCGCGCTGGGAGCGATATCTCG
AAGCCGTCGCTCAGCGAGTCCGTGCCCGCGGTTATCCGACCAGCTGGAGCCTCGGCAGTGGGCCAGTCGCCGAGACGATC
GCGGCCGAAGCAGCCGCGCGCCAGGCTGGCCTCATCGCCATGGGCACGCACGGCATGAGCGGGATCCGGCGAGTGCTTTT
GGGCTCGACGGCCGAGCACGTCCTCCATGCGACGACGGTGCCGCTCCTCCTCCACCGGCCACAGGCCGTCCGACAAGCCT
TGGAAGAGCCGGCGACTGCGAACGAAACCCTGCGGGCACGCGATATCATGACGCCGGATCCAGTAACGGTCGGGCCAGAC
GCCACGCTCGAACAGGTCGCTCGACTCATGCTCGACCGGCAGATCGGCGCCGTTCCAGTGGTCGATGCGGACGGCAGGCT
GCTCGGCCTGATTCGCGAAGAGGACTTCCTGGCGCAGGAAAAGCCGATTCCTTTCGCGGCCTTCCGCGCCCCACAGCTCT
TCGGACACTGGCTGAATGCGGAAGGGATCGAGCGGATCTACGCTGAAGCGCGGACGATGAAGGCAGGAGACGTTGCGCAA
GCACCGGCAGTGACGGTGACGGAGGACACACCACTGAGCCGAATCGCCCAGCTCATGGTCGAACGCGACGTCCGGCACAT
CCCGGTCGTGCGTGACGGCAAACTCGTCGGCATCGTCACCCGACATGATGTTCTCAAGGCAGTCGCCCGACAACGCAGCA
CGTCAGCGACGACCGGGCACGCATCGTAG

Upstream 100 bases:

>100_bases
CCGCTGAAGCGGCGAGGGCCAGGGTTACTAGCACCGCGAGGATCGCGATCATGATAGGCTACCCGTAGGGTAGTGAAGCG
GACAGGGAGGGTTGGACACG

Downstream 100 bases:

>100_bases
CCCAACGCGACTTCGCTGACTGCTGCGCAGATCGGAGAGCGAAGGGATCGCGTTCTGTGCGAGACACAGTACACTGGCAT
GCCCTGACGGTAGCAGAAAC

Product: UspA domain protein, putative

Products: NA

Alternate protein names: CBS Domain Containing Membrane Protein; Signal-Transduction Protein; Signal Transduction Protein; Signal Transduction Protein With CBS Domains; UspA Domain Protein; CBS Domain Containing Protein; CBS Domain-Containing Membrane Protein; IMP Dehydrogenase; UspA Domain-Containing Protein; Universal Stress Protein; Signal-Transduction Protein With CBS Domains; CBS Domain Pair-Containing Protein; CBS Domain Protein; PolyA Polymerase Family Protein; Transcriptional Regulator XRE Family; Cbs Domain; Cbs Domain Containing Protein; XRE Family Transcriptional Regulator; Signal Transduction Protein With Cbs Domains; Universal Stress Protein Uspa-Like Protein; Inosine-5-Monophosphate Dehydrogenase; CBS Domain Family Protein

Number of amino acids: Translated: 462; Mature: 461

Protein sequence:

>462_residues
MAGPVVVPVLPTYLDPERVTHCAIPFGRAIAQRLGSELVLLSIVEVTESLRSYLEAEGEQVEQLVQRWLEQRRASLERLR
NAISDVSCRIEVRLGEPAKEIVAYADASQAAVIVMSSHGRLGVARLLVGSVTFSVMQRARQPALVVRARVPVPAPNASVT
FSPVLVPLDGSALAEEAIDTALDLLGQGSEPLQLHLFHVLAEEEDPARWERYLEAVAQRVRARGYPTSWSLGSGPVAETI
AAEAAARQAGLIAMGTHGMSGIRRVLLGSTAEHVLHATTVPLLLHRPQAVRQALEEPATANETLRARDIMTPDPVTVGPD
ATLEQVARLMLDRQIGAVPVVDADGRLLGLIREEDFLAQEKPIPFAAFRAPQLFGHWLNAEGIERIYAEARTMKAGDVAQ
APAVTVTEDTPLSRIAQLMVERDVRHIPVVRDGKLVGIVTRHDVLKAVARQRSTSATTGHAS

Sequences:

>Translated_462_residues
MAGPVVVPVLPTYLDPERVTHCAIPFGRAIAQRLGSELVLLSIVEVTESLRSYLEAEGEQVEQLVQRWLEQRRASLERLR
NAISDVSCRIEVRLGEPAKEIVAYADASQAAVIVMSSHGRLGVARLLVGSVTFSVMQRARQPALVVRARVPVPAPNASVT
FSPVLVPLDGSALAEEAIDTALDLLGQGSEPLQLHLFHVLAEEEDPARWERYLEAVAQRVRARGYPTSWSLGSGPVAETI
AAEAAARQAGLIAMGTHGMSGIRRVLLGSTAEHVLHATTVPLLLHRPQAVRQALEEPATANETLRARDIMTPDPVTVGPD
ATLEQVARLMLDRQIGAVPVVDADGRLLGLIREEDFLAQEKPIPFAAFRAPQLFGHWLNAEGIERIYAEARTMKAGDVAQ
APAVTVTEDTPLSRIAQLMVERDVRHIPVVRDGKLVGIVTRHDVLKAVARQRSTSATTGHAS
>Mature_461_residues
AGPVVVPVLPTYLDPERVTHCAIPFGRAIAQRLGSELVLLSIVEVTESLRSYLEAEGEQVEQLVQRWLEQRRASLERLRN
AISDVSCRIEVRLGEPAKEIVAYADASQAAVIVMSSHGRLGVARLLVGSVTFSVMQRARQPALVVRARVPVPAPNASVTF
SPVLVPLDGSALAEEAIDTALDLLGQGSEPLQLHLFHVLAEEEDPARWERYLEAVAQRVRARGYPTSWSLGSGPVAETIA
AEAAARQAGLIAMGTHGMSGIRRVLLGSTAEHVLHATTVPLLLHRPQAVRQALEEPATANETLRARDIMTPDPVTVGPDA
TLEQVARLMLDRQIGAVPVVDADGRLLGLIREEDFLAQEKPIPFAAFRAPQLFGHWLNAEGIERIYAEARTMKAGDVAQA
PAVTVTEDTPLSRIAQLMVERDVRHIPVVRDGKLVGIVTRHDVLKAVARQRSTSATTGHAS

Specific function: Unknown

COG id: COG0517

COG function: function code R; FOG: CBS domain

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 50035; Mature: 49904

Theoretical pI: Translated: 6.39; Mature: 6.39

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.4 %Cys     (Translated Protein)
1.9 %Met     (Translated Protein)
2.4 %Cys+Met (Translated Protein)
0.4 %Cys     (Mature Protein)
1.7 %Met     (Mature Protein)
2.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MAGPVVVPVLPTYLDPERVTHCAIPFGRAIAQRLGSELVLLSIVEVTESLRSYLEAEGEQ
CCCCEEEECCCCCCCHHHHHHHCCHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHCCHHH
VEQLVQRWLEQRRASLERLRNAISDVSCRIEVRLGEPAKEIVAYADASQAAVIVMSSHGR
HHHHHHHHHHHHHHHHHHHHHHHHCCEEEEEEEECCCHHHHHHHCCCCCEEEEEEECCCC
LGVARLLVGSVTFSVMQRARQPALVVRARVPVPAPNASVTFSPVLVPLDGSALAEEAIDT
HHHHHHHHHHHHHHHHHHCCCCEEEEEEECCCCCCCCCEEECEEEEECCCHHHHHHHHHH
ALDLLGQGSEPLQLHLFHVLAEEEDPARWERYLEAVAQRVRARGYPTSWSLGSGPVAETI
HHHHHCCCCCCHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCHHHHH
AAEAAARQAGLIAMGTHGMSGIRRVLLGSTAEHVLHATTVPLLLHRPQAVRQALEEPATA
HHHHHHHHCCEEEECCCCHHHHHHHHHCCHHHHHHHHHHHHHHHCCCHHHHHHHHCCCCC
NETLRARDIMTPDPVTVGPDATLEQVARLMLDRQIGAVPVVDADGRLLGLIREEDFLAQE
CCHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHCCCCEEEECCCCCEEEEEEHHHHHHCC
KPIPFAAFRAPQLFGHWLNAEGIERIYAEARTMKAGDVAQAPAVTVTEDTPLSRIAQLMV
CCCCHHHHCCHHHHHHHCCHHHHHHHHHHHHHCCCCCCCCCCEEEEECCCCHHHHHHHHH
ERDVRHIPVVRDGKLVGIVTRHDVLKAVARQRSTSATTGHAS
HHCHHHCCEEECCCEEEEEHHHHHHHHHHHHCCCCCCCCCCC
>Mature Secondary Structure 
AGPVVVPVLPTYLDPERVTHCAIPFGRAIAQRLGSELVLLSIVEVTESLRSYLEAEGEQ
CCCEEEECCCCCCCHHHHHHHCCHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHCCHHH
VEQLVQRWLEQRRASLERLRNAISDVSCRIEVRLGEPAKEIVAYADASQAAVIVMSSHGR
HHHHHHHHHHHHHHHHHHHHHHHHCCEEEEEEEECCCHHHHHHHCCCCCEEEEEEECCCC
LGVARLLVGSVTFSVMQRARQPALVVRARVPVPAPNASVTFSPVLVPLDGSALAEEAIDT
HHHHHHHHHHHHHHHHHHCCCCEEEEEEECCCCCCCCCEEECEEEEECCCHHHHHHHHHH
ALDLLGQGSEPLQLHLFHVLAEEEDPARWERYLEAVAQRVRARGYPTSWSLGSGPVAETI
HHHHHCCCCCCHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCHHHHH
AAEAAARQAGLIAMGTHGMSGIRRVLLGSTAEHVLHATTVPLLLHRPQAVRQALEEPATA
HHHHHHHHCCEEEECCCCHHHHHHHHHCCHHHHHHHHHHHHHHHCCCHHHHHHHHCCCCC
NETLRARDIMTPDPVTVGPDATLEQVARLMLDRQIGAVPVVDADGRLLGLIREEDFLAQE
CCHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHCCCCEEEECCCCCEEEEEEHHHHHHCC
KPIPFAAFRAPQLFGHWLNAEGIERIYAEARTMKAGDVAQAPAVTVTEDTPLSRIAQLMV
CCCCHHHHCCHHHHHHHCCHHHHHHHHHHHHHCCCCCCCCCCEEEEECCCCHHHHHHHHH
ERDVRHIPVVRDGKLVGIVTRHDVLKAVARQRSTSATTGHAS
HHCHHHCCEEECCCEEEEEHHHHHHHHHHHHCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA