Definition Thermomicrobium roseum DSM 5159 plasmid unnamed, complete sequence.
Accession NC_011961
Length 917,738

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The map label for this gene is 221635683

Identifier: 221635683

GI number: 221635683

Start: 261060

End: 261491

Strand: Reverse

Name: 221635683

Synonym: trd_A0277

Alternate gene names: NA

Gene position: 261491-261060 (Counterclockwise)

Preceding gene: 221635688

Following gene: 221635682

Centisome position: 28.49

GC content: 57.41

Gene sequence:

>432_bases
ATGAACATGTTCGAATTGGTCGCTGCGTTCATGACTGCCGCCGCGACAACGATCACGGCTGTCCTCACGGCATTGCGCTA
TCGGCACGAACGCGCCCTGGAGCGACGGGCGTTCGTGCGGGCCACCATCATTGAAGTCACACAAAGCGAAAACGGACAGT
CGCGCAATAGCTATCGTTTGAAACTGCACAATGCCGGTAAGGCCAGGGCCACCAACCTGCGCCTCTTACTCGACGGCCAA
GAGGCAAGACCATACGAGGCTGTCGGAGCTATGGCTATTATGTCTCGCATCCCTCACCACCTGGAACCGGGCGGCGAGGC
TCTACTACGATTTACTCTCTTTCTGGGAGGTGACATACCGACGAAACTCACCGTGCTCTGGGACGACCTTGCAGGCAGCA
GTCATTGCTCGAGCTTGGACCTATCGGTCTGA

Upstream 100 bases:

>100_bases
TGACAGTAGCACAGATTATCCGGTAGACTCGGGGAGGGAGTGTACGTACACATTGCGAGGAAACTGACCATCGCAAACGC
TCTCGACCAGGAGGTACCTC

Downstream 100 bases:

>100_bases
TGGATCGGAGGAGCGCAACGTCATGCATCCGCCGGCGGAGAATGTGAGGGTTACCCACCTCGCCTTCGCTGATGAATCGC
ACTGGAATACGGGTCGCTAC

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 143; Mature: 143

Protein sequence:

>143_residues
MNMFELVAAFMTAAATTITAVLTALRYRHERALERRAFVRATIIEVTQSENGQSRNSYRLKLHNAGKARATNLRLLLDGQ
EARPYEAVGAMAIMSRIPHHLEPGGEALLRFTLFLGGDIPTKLTVLWDDLAGSSHCSSLDLSV

Sequences:

>Translated_143_residues
MNMFELVAAFMTAAATTITAVLTALRYRHERALERRAFVRATIIEVTQSENGQSRNSYRLKLHNAGKARATNLRLLLDGQ
EARPYEAVGAMAIMSRIPHHLEPGGEALLRFTLFLGGDIPTKLTVLWDDLAGSSHCSSLDLSV
>Mature_143_residues
MNMFELVAAFMTAAATTITAVLTALRYRHERALERRAFVRATIIEVTQSENGQSRNSYRLKLHNAGKARATNLRLLLDGQ
EARPYEAVGAMAIMSRIPHHLEPGGEALLRFTLFLGGDIPTKLTVLWDDLAGSSHCSSLDLSV

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 15766; Mature: 15766

Theoretical pI: Translated: 9.18; Mature: 9.18

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.7 %Cys     (Translated Protein)
3.5 %Met     (Translated Protein)
4.2 %Cys+Met (Translated Protein)
0.7 %Cys     (Mature Protein)
3.5 %Met     (Mature Protein)
4.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNMFELVAAFMTAAATTITAVLTALRYRHERALERRAFVRATIIEVTQSENGQSRNSYRL
CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCEEEE
KLHNAGKARATNLRLLLDGQEARPYEAVGAMAIMSRIPHHLEPGGEALLRFTLFLGGDIP
EEECCCCCCCCEEEEEEECCCCCCHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHCCCCC
TKLTVLWDDLAGSSHCSSLDLSV
CEEEEEEECCCCCCCCCCCCCCC
>Mature Secondary Structure
MNMFELVAAFMTAAATTITAVLTALRYRHERALERRAFVRATIIEVTQSENGQSRNSYRL
CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCEEEE
KLHNAGKARATNLRLLLDGQEARPYEAVGAMAIMSRIPHHLEPGGEALLRFTLFLGGDIP
EEECCCCCCCCEEEEEEECCCCCCHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHCCCCC
TKLTVLWDDLAGSSHCSSLDLSV
CEEEEEEECCCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA