| Definition | Thermomicrobium roseum DSM 5159 plasmid unnamed, complete sequence. |
|---|---|
| Accession | NC_011961 |
| Length | 917,738 |
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The map label for this gene is 221635651
Identifier: 221635651
GI number: 221635651
Start: 231455
End: 231886
Strand: Reverse
Name: 221635651
Synonym: trd_A0245
Alternate gene names: NA
Gene position: 231886-231455 (Counterclockwise)
Preceding gene: 221635658
Following gene: 221635649
Centisome position: 25.27
GC content: 66.44
Gene sequence:
>432_bases ATGGCAGTGACCTTGCCCCCACTCGTGCGAACCTTTCTCGAGCAGCAGCGGGTCGGGCATCTGGCCACGGTGAGCCGCGG TGGCGAACCGCACGTCGTCCCGGTCTGCTATGTCGTCGCGGACGACACGATCTACACGCCGATCGACGAGAAGCCGAAGC AGCCGGGTCGCACGCTCCGGCGGGTCCGCAATATCGAGGAAACCGGTCGCGCCGCTCTCGTCGTCGACCGGTACGACGAA GACTGGACGCAGCTTGGCTGGGTGCTCCTTCGCGGGCGGGCGGAACTCCTCGCGCCGGGATCTCCGGAACAGGCGCGTGC GGTCGAACTCCTGCGCCAGCGCTATCCGCAGTACCAAGCGATGCGACTGGAAACGCAGTCGATGATCGCGCTCCGGATCG AGCGTGTCAGCGTGTGGGGCAAACTGGAGTGA
Upstream 100 bases:
>100_bases TGTCGCGCGGTACAACGGGCGACTCGCTGAGCGACGCAGCTCCTGCAGTCGGTGCCGCCAGCGATCGTTGCGTTCCGGTT CTGAGACCAGGAACCCGGTC
Downstream 100 bases:
>100_bases GCCTATCGGTCGCGACCAGTGTTCAGCGGAGCACGTGCACGAGCGTGTAGAGCCCCATCGCGATCATCGCTCCGCCCGCG ATGATCCCTGGCCATCCGCG
Product: ppox class probable f420-dependent enzyme, family
Products: NA
Alternate protein names: Nitroreductase; Pyridoxamine 5-Phosphate Oxidase; Ppox Class; Pyridoxamine 5-Phosphate Oxidase-Like Protein; Fmn Flavoprotein; Pyridoxamine 5-Phosphate Oxidase Family Protein
Number of amino acids: Translated: 143; Mature: 142
Protein sequence:
>143_residues MAVTLPPLVRTFLEQQRVGHLATVSRGGEPHVVPVCYVVADDTIYTPIDEKPKQPGRTLRRVRNIEETGRAALVVDRYDE DWTQLGWVLLRGRAELLAPGSPEQARAVELLRQRYPQYQAMRLETQSMIALRIERVSVWGKLE
Sequences:
>Translated_143_residues MAVTLPPLVRTFLEQQRVGHLATVSRGGEPHVVPVCYVVADDTIYTPIDEKPKQPGRTLRRVRNIEETGRAALVVDRYDE DWTQLGWVLLRGRAELLAPGSPEQARAVELLRQRYPQYQAMRLETQSMIALRIERVSVWGKLE >Mature_142_residues AVTLPPLVRTFLEQQRVGHLATVSRGGEPHVVPVCYVVADDTIYTPIDEKPKQPGRTLRRVRNIEETGRAALVVDRYDED WTQLGWVLLRGRAELLAPGSPEQARAVELLRQRYPQYQAMRLETQSMIALRIERVSVWGKLE
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 16345; Mature: 16214
Theoretical pI: Translated: 9.06; Mature: 9.06
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.7 %Cys (Translated Protein) 2.1 %Met (Translated Protein) 2.8 %Cys+Met (Translated Protein) 0.7 %Cys (Mature Protein) 1.4 %Met (Mature Protein) 2.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MAVTLPPLVRTFLEQQRVGHLATVSRGGEPHVVPVCYVVADDTIYTPIDEKPKQPGRTLR CCCCCHHHHHHHHHHHHCCCHHHHCCCCCCCEEEEEEEEECCEEECCCCCCCCCCCHHHH RVRNIEETGRAALVVDRYDEDWTQLGWVLLRGRAELLAPGSPEQARAVELLRQRYPQYQA HHHCHHHCCCEEEEEECCCCCHHHHHHHHHCCCHHEECCCCCHHHHHHHHHHHHCCCHHH MRLETQSMIALRIERVSVWGKLE HHHHHHHHHHHHHHHHHCCCCCC >Mature Secondary Structure AVTLPPLVRTFLEQQRVGHLATVSRGGEPHVVPVCYVVADDTIYTPIDEKPKQPGRTLR CCCCHHHHHHHHHHHHCCCHHHHCCCCCCCEEEEEEEEECCEEECCCCCCCCCCCHHHH RVRNIEETGRAALVVDRYDEDWTQLGWVLLRGRAELLAPGSPEQARAVELLRQRYPQYQA HHHCHHHCCCEEEEEECCCCCHHHHHHHHHCCCHHEECCCCCHHHHHHHHHHHHCCCHHH MRLETQSMIALRIERVSVWGKLE HHHHHHHHHHHHHHHHHCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA