| Definition | Thermomicrobium roseum DSM 5159 plasmid unnamed, complete sequence. |
|---|---|
| Accession | NC_011961 |
| Length | 917,738 |
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The map label for this gene is mntH [H]
Identifier: 221635645
GI number: 221635645
Start: 227355
End: 228644
Strand: Reverse
Name: mntH [H]
Synonym: trd_A0239
Alternate gene names: 221635645
Gene position: 228644-227355 (Counterclockwise)
Preceding gene: 221635649
Following gene: 221635644
Centisome position: 24.91
GC content: 64.42
Gene sequence:
>1290_bases GTGAACGAGCCGCCCAGCGAACCATCGTCCACTGCCCCGATCGCCCGCCGATCCAGGCAGCTCCGCGTGCGTGGACTCGC GAGCGTTCTCCCTTACCTCGGTCCAGCTTTCGTTGCCAGCGTGGCGTACATCGATCCTGGCAACTACGCGACCAATATCG AAAGCGGCGCTCAATTCGGCTACACCCTTCTCTGGGTCATCCTGGCCGCCAACCTCGCTGCGATGCTGATCCAGTCGCTT TCCGCCAAGCTGGGTATCGCCACTGGCCGCAACCTCGCTGAGCTCTGCCGGGAGCGCTTCCCCCGTCCCGTGGTCTGGCT CATGTGGATCGTCGCCGAACTGGTCGCCATGGCGACCGACCTCGCCGAGTTCCTCGGTGCCGCGCTCGGGTTCGCTCTCC TCTTCCACTTTCCGCTGCTGATCGGTGGCATCTTGACGGGAATCACGACGTTCGCCATCCTCGCGCTGGAGCGCTACGGA CACCGGCCGATCGAAGCGGTGATCACGAGTCTCGTCGGTGTCATCGCCGGCTGCTATGTCGTGGAAACGGTCCTCGAGCG ACCGGACTGGAACGCCATCGCTCGCCATGCGCTCATCCCGGAGTTCGCCGGCCCGGAAAGCGTGCTGCTGGCCACCGGAA TTCTCGGAGCGACCGTCATGCCGCATGTCATCTACTTGCACTCGGCACTCACCCAGCATCGTATCGTGCCGCGCACGCCG GCCGAAGCACAGCGCATCTTCCGCTTCGAGGTGCTCGACGTCGTGATCGCCATGGGCATCGCTGGGCTCGTCAATGCTGC CATGCTCATCATGGCAGCTTCGACCTTTCATGCCCGCGGACTCTCCGACGTCGGGACGATCGAGGAGGCCCACCGCACGT TGCAGCCATTGCTCGGACCATTGGCCAGCACCGCGTTCGCGCTCTCACTGCTCGCGTCGGGCCTTTCCTCCTCCACGGTC GGCACGATGGCCGGTCAAGTGGTGATGCAAGGCTTCCTTCATCGGACGATCCCCGTCTGGCTCCGCCGGGGAATCACCAT GCTCCCGGCCCTCATCGCCATCGCGCTCGGGCTCGATCCCACACGCACGCTCGTGATCAGCCAGGTCGTCTTGAGCTTCG GCATCCCGTTCGCGCTCCTCCCACTGATTCTCTTCACCGCCGATCGGGCACTGATGGGTGCACTGGTGAACCGGCGACCG ACGACACTGGTGGCGAGCATCCTCGCTCTCCTCATCATCGGGCTCAACCTCTGGCTGCTCTGGACGACATTCACGGGAAG TGGCGCATGA
Upstream 100 bases:
>100_bases CCCGACCACCGAGCGGAACCGGAAAGCGACGGAGCATTCTCGGCACGTCGAAAACGAGCGCCGTATCATTAGCATTGGCT AAAATCGGGAGGGGTATGAT
Downstream 100 bases:
>100_bases GCGAGATCCCGTTGGCGCACATCCTCGTTCCCCTCGATGGCTCATCGCTGGCCGAGCAGATCCTCCCCGTCGCCGCTGGA CTCGTCCGTGCGTGCGGCCG
Product: mn2+/fe2+ transporter, nramp family
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 429; Mature: 429
Protein sequence:
>429_residues MNEPPSEPSSTAPIARRSRQLRVRGLASVLPYLGPAFVASVAYIDPGNYATNIESGAQFGYTLLWVILAANLAAMLIQSL SAKLGIATGRNLAELCRERFPRPVVWLMWIVAELVAMATDLAEFLGAALGFALLFHFPLLIGGILTGITTFAILALERYG HRPIEAVITSLVGVIAGCYVVETVLERPDWNAIARHALIPEFAGPESVLLATGILGATVMPHVIYLHSALTQHRIVPRTP AEAQRIFRFEVLDVVIAMGIAGLVNAAMLIMAASTFHARGLSDVGTIEEAHRTLQPLLGPLASTAFALSLLASGLSSSTV GTMAGQVVMQGFLHRTIPVWLRRGITMLPALIAIALGLDPTRTLVISQVVLSFGIPFALLPLILFTADRALMGALVNRRP TTLVASILALLIIGLNLWLLWTTFTGSGA
Sequences:
>Translated_429_residues MNEPPSEPSSTAPIARRSRQLRVRGLASVLPYLGPAFVASVAYIDPGNYATNIESGAQFGYTLLWVILAANLAAMLIQSL SAKLGIATGRNLAELCRERFPRPVVWLMWIVAELVAMATDLAEFLGAALGFALLFHFPLLIGGILTGITTFAILALERYG HRPIEAVITSLVGVIAGCYVVETVLERPDWNAIARHALIPEFAGPESVLLATGILGATVMPHVIYLHSALTQHRIVPRTP AEAQRIFRFEVLDVVIAMGIAGLVNAAMLIMAASTFHARGLSDVGTIEEAHRTLQPLLGPLASTAFALSLLASGLSSSTV GTMAGQVVMQGFLHRTIPVWLRRGITMLPALIAIALGLDPTRTLVISQVVLSFGIPFALLPLILFTADRALMGALVNRRP TTLVASILALLIIGLNLWLLWTTFTGSGA >Mature_429_residues MNEPPSEPSSTAPIARRSRQLRVRGLASVLPYLGPAFVASVAYIDPGNYATNIESGAQFGYTLLWVILAANLAAMLIQSL SAKLGIATGRNLAELCRERFPRPVVWLMWIVAELVAMATDLAEFLGAALGFALLFHFPLLIGGILTGITTFAILALERYG HRPIEAVITSLVGVIAGCYVVETVLERPDWNAIARHALIPEFAGPESVLLATGILGATVMPHVIYLHSALTQHRIVPRTP AEAQRIFRFEVLDVVIAMGIAGLVNAAMLIMAASTFHARGLSDVGTIEEAHRTLQPLLGPLASTAFALSLLASGLSSSTV GTMAGQVVMQGFLHRTIPVWLRRGITMLPALIAIALGLDPTRTLVISQVVLSFGIPFALLPLILFTADRALMGALVNRRP TTLVASILALLIIGLNLWLLWTTFTGSGA
Specific function: H(+)-stimulated, highly selective, manganese uptake system [H]
COG id: COG1914
COG function: function code P; Mn2+ and Fe2+ transporters of the NRAMP family
Gene ontology:
Cell location: Cell membrane; Multi-pass membrane protein (Probable) [H]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the NRAMP family [H]
Homologues:
Organism=Homo sapiens, GI109255241, Length=453, Percent_Identity=32.6710816777042, Blast_Score=200, Evalue=2e-51, Organism=Homo sapiens, GI295293167, Length=426, Percent_Identity=31.2206572769953, Blast_Score=177, Evalue=2e-44, Organism=Homo sapiens, GI295293175, Length=426, Percent_Identity=31.2206572769953, Blast_Score=176, Evalue=3e-44, Organism=Homo sapiens, GI295293173, Length=426, Percent_Identity=31.2206572769953, Blast_Score=176, Evalue=3e-44, Organism=Homo sapiens, GI10835169, Length=426, Percent_Identity=31.2206572769953, Blast_Score=176, Evalue=3e-44, Organism=Homo sapiens, GI295293178, Length=426, Percent_Identity=31.2206572769953, Blast_Score=176, Evalue=3e-44, Organism=Homo sapiens, GI295293171, Length=426, Percent_Identity=31.2206572769953, Blast_Score=176, Evalue=3e-44, Organism=Homo sapiens, GI295293169, Length=426, Percent_Identity=31.2206572769953, Blast_Score=176, Evalue=3e-44, Organism=Escherichia coli, GI1788736, Length=426, Percent_Identity=52.8169014084507, Blast_Score=424, Evalue=1e-120, Organism=Caenorhabditis elegans, GI17569473, Length=408, Percent_Identity=31.1274509803922, Blast_Score=197, Evalue=6e-51, Organism=Caenorhabditis elegans, GI193210616, Length=465, Percent_Identity=27.741935483871, Blast_Score=184, Evalue=9e-47, Organism=Caenorhabditis elegans, GI71999499, Length=432, Percent_Identity=30.0925925925926, Blast_Score=181, Evalue=5e-46, Organism=Caenorhabditis elegans, GI71993856, Length=235, Percent_Identity=31.9148936170213, Blast_Score=142, Evalue=3e-34, Organism=Saccharomyces cerevisiae, GI6324450, Length=427, Percent_Identity=31.8501170960187, Blast_Score=195, Evalue=1e-50, Organism=Saccharomyces cerevisiae, GI6323062, Length=390, Percent_Identity=34.1025641025641, Blast_Score=193, Evalue=4e-50, Organism=Saccharomyces cerevisiae, GI6321841, Length=450, Percent_Identity=31.7777777777778, Blast_Score=173, Evalue=4e-44, Organism=Drosophila melanogaster, GI24648607, Length=429, Percent_Identity=31.002331002331, Blast_Score=210, Evalue=1e-54, Organism=Drosophila melanogaster, GI281362176, Length=429, Percent_Identity=31.002331002331, Blast_Score=210, Evalue=1e-54, Organism=Drosophila melanogaster, GI24648609, Length=429, Percent_Identity=31.002331002331, Blast_Score=210, Evalue=1e-54, Organism=Drosophila melanogaster, GI45553443, Length=406, Percent_Identity=31.2807881773399, Blast_Score=198, Evalue=5e-51,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR023056 - InterPro: IPR001046 [H]
Pfam domain/function: PF01566 Nramp [H]
EC number: NA
Molecular weight: Translated: 45812; Mature: 45812
Theoretical pI: Translated: 9.10; Mature: 9.10
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.5 %Cys (Translated Protein) 2.8 %Met (Translated Protein) 3.3 %Cys+Met (Translated Protein) 0.5 %Cys (Mature Protein) 2.8 %Met (Mature Protein) 3.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MNEPPSEPSSTAPIARRSRQLRVRGLASVLPYLGPAFVASVAYIDPGNYATNIESGAQFG CCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEECCCCCCCCCCCCHHHH YTLLWVILAANLAAMLIQSLSAKLGIATGRNLAELCRERFPRPVVWLMWIVAELVAMATD HHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHCCCHHHHHHHHHHHHHHHHHH LAEFLGAALGFALLFHFPLLIGGILTGITTFAILALERYGHRPIEAVITSLVGVIAGCYV HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHH VETVLERPDWNAIARHALIPEFAGPESVLLATGILGATVMPHVIYLHSALTQHRIVPRTP HHHHHHCCCHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCC AEAQRIFRFEVLDVVIAMGIAGLVNAAMLIMAASTFHARGLSDVGTIEEAHRTLQPLLGP HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHH LASTAFALSLLASGLSSSTVGTMAGQVVMQGFLHRTIPVWLRRGITMLPALIAIALGLDP HHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHCCCH TRTLVISQVVLSFGIPFALLPLILFTADRALMGALVNRRPTTLVASILALLIIGLNLWLL HHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHH WTTFTGSGA HHHCCCCCC >Mature Secondary Structure MNEPPSEPSSTAPIARRSRQLRVRGLASVLPYLGPAFVASVAYIDPGNYATNIESGAQFG CCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEECCCCCCCCCCCCHHHH YTLLWVILAANLAAMLIQSLSAKLGIATGRNLAELCRERFPRPVVWLMWIVAELVAMATD HHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHCCCHHHHHHHHHHHHHHHHHH LAEFLGAALGFALLFHFPLLIGGILTGITTFAILALERYGHRPIEAVITSLVGVIAGCYV HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHH VETVLERPDWNAIARHALIPEFAGPESVLLATGILGATVMPHVIYLHSALTQHRIVPRTP HHHHHHCCCHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCC AEAQRIFRFEVLDVVIAMGIAGLVNAAMLIMAASTFHARGLSDVGTIEEAHRTLQPLLGP HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHH LASTAFALSLLASGLSSSTVGTMAGQVVMQGFLHRTIPVWLRRGITMLPALIAIALGLDP HHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHCCCH TRTLVISQVVLSFGIPFALLPLILFTADRALMGALVNRRPTTLVASILALLIIGLNLWLL HHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHH WTTFTGSGA HHHCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 6.0
TargetDB status: NA
Availability: NA
References: 10567266 [H]