Definition Thermomicrobium roseum DSM 5159 plasmid unnamed, complete sequence.
Accession NC_011961
Length 917,738

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The map label for this gene is 221635597

Identifier: 221635597

GI number: 221635597

Start: 172172

End: 172999

Strand: Reverse

Name: 221635597

Synonym: trd_A0191

Alternate gene names: NA

Gene position: 172999-172172 (Counterclockwise)

Preceding gene: 221635598

Following gene: 221635596

Centisome position: 18.85

GC content: 67.15

Gene sequence:

>828_bases
ATGGGTGGTAAGGCGTTCGTCGTCCTGGCCCAGAAAGAGCTCCGCGATGCGTTCCGCAACCGCTGGTTCATCGCCGATGC
GCTCGCGCTCCTTATCCTGAGTCTCGCTCTGTCGCTGCTCGTTTCCCTGACCGGCGCTGCCAGCCCGGTCAGCGGCTTCG
GGCGTACAGCCGCTAGTCTCGTCAACCTCATGCTCCTGCTCGTCCCCTTGATGGGGATCACGCTGGGAGCGCTGGCTATC
GCGGGAGACCGGGAGCGGGGCGCGCTCGAGTTCTGGCTGACGCAGCCGGTCAGCACTGCGACCTTCTTTCTGGCCAAGGC
GCTGGGCATGGGAGCAGCGCTGGCGGCCGCCGTTCTCGTCGGCTTCGGGGCGAGTTCCGTCGTGCTCCTCCTCGTTGGCG
CCACCGATCCGTTCGCCTTCCTCGCCCTGGCCGGCTTGACCGTGCTCCTGGCGTGGGCTTCCCTCGCGCTTGGGCTCTTG
CTCTCCAGTCGCTGTGCCCGCACCAGCACTGCCGTGAGCCTGGGCCTCGGTGCCTGGCTCCTCCTCGTCCTGCTCGGCGA
CTTGGGGCTCATGGGAACTGCGCTGGCTGTCCGTCTCCCCCCAGCTTGGCTCCTAGCCATCGCGCTGGGCAACCCGGTGG
AGACCTATCGTATCGCCGCATTGCGCTTGCTCGCTGGCACCTTGGAGTTGCTCGGACCGGCCGGGCTCTATGCTGACGAG
CGGTTCGGGGCCAGTCTCTGGATCTTGCTGCCAACGACGCTCCTTCTCTGGATCGCCGCGGGCACCGGTTTCGCCTACAT
CGTTCTGCGCCGGGAGGTGTCGCGATGA

Upstream 100 bases:

>100_bases
GAGGTGCGTGTCCTCGTCACTCGGGATCGCAAAGCCGAGCCTTTCTTCCTGCTTGCCCGCGTCGGTATCCGCGTCCGCGA
CTTCCGCTTGGAGGCCTCCG

Downstream 100 bases:

>100_bases
CCCGTCGGCTGTTTCTCATGGTGCTCTTGGGAAGCCTCTCGGCAGGAGCATGCCGGCGTCAGAAAGCGCTCACCCCACCG
GAGATCCGCCTCGGGCGCGA

Product: ABC-2 type transporter superfamily

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 275; Mature: 274

Protein sequence:

>275_residues
MGGKAFVVLAQKELRDAFRNRWFIADALALLILSLALSLLVSLTGAASPVSGFGRTAASLVNLMLLLVPLMGITLGALAI
AGDRERGALEFWLTQPVSTATFFLAKALGMGAALAAAVLVGFGASSVVLLLVGATDPFAFLALAGLTVLLAWASLALGLL
LSSRCARTSTAVSLGLGAWLLLVLLGDLGLMGTALAVRLPPAWLLAIALGNPVETYRIAALRLLAGTLELLGPAGLYADE
RFGASLWILLPTTLLLWIAAGTGFAYIVLRREVSR

Sequences:

>Translated_275_residues
MGGKAFVVLAQKELRDAFRNRWFIADALALLILSLALSLLVSLTGAASPVSGFGRTAASLVNLMLLLVPLMGITLGALAI
AGDRERGALEFWLTQPVSTATFFLAKALGMGAALAAAVLVGFGASSVVLLLVGATDPFAFLALAGLTVLLAWASLALGLL
LSSRCARTSTAVSLGLGAWLLLVLLGDLGLMGTALAVRLPPAWLLAIALGNPVETYRIAALRLLAGTLELLGPAGLYADE
RFGASLWILLPTTLLLWIAAGTGFAYIVLRREVSR
>Mature_274_residues
GGKAFVVLAQKELRDAFRNRWFIADALALLILSLALSLLVSLTGAASPVSGFGRTAASLVNLMLLLVPLMGITLGALAIA
GDRERGALEFWLTQPVSTATFFLAKALGMGAALAAAVLVGFGASSVVLLLVGATDPFAFLALAGLTVLLAWASLALGLLL
SSRCARTSTAVSLGLGAWLLLVLLGDLGLMGTALAVRLPPAWLLAIALGNPVETYRIAALRLLAGTLELLGPAGLYADER
FGASLWILLPTTLLLWIAAGTGFAYIVLRREVSR

Specific function: Involved in copper processing [H]

COG id: COG1277

COG function: function code R; ABC-type transport system involved in multi-copper enzyme maturation, permease component

Gene ontology:

Cell location: Membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 28522; Mature: 28390

Theoretical pI: Translated: 10.42; Mature: 10.42

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.4 %Cys     (Translated Protein)
1.8 %Met     (Translated Protein)
2.2 %Cys+Met (Translated Protein)
0.4 %Cys     (Mature Protein)
1.5 %Met     (Mature Protein)
1.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MGGKAFVVLAQKELRDAFRNRWFIADALALLILSLALSLLVSLTGAASPVSGFGRTAASL
CCCCEEEEEEHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHH
VNLMLLLVPLMGITLGALAIAGDRERGALEFWLTQPVSTATFFLAKALGMGAALAAAVLV
HHHHHHHHHHHHHHHHHHHHCCCCCCCCEEEEECCCHHHHHHHHHHHHCCHHHHHHHHHH
GFGASSVVLLLVGATDPFAFLALAGLTVLLAWASLALGLLLSSRCARTSTAVSLGLGAWL
HCCCHHEEEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
LLVLLGDLGLMGTALAVRLPPAWLLAIALGNPVETYRIAALRLLAGTLELLGPAGLYADE
HHHHHHHHHHHHHHHHHCCCHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCH
RFGASLWILLPTTLLLWIAAGTGFAYIVLRREVSR
HCCCCHHHHHHHHHHHHHHHCCCCEEEEEEHHHCC
>Mature Secondary Structure 
GGKAFVVLAQKELRDAFRNRWFIADALALLILSLALSLLVSLTGAASPVSGFGRTAASL
CCCEEEEEEHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHH
VNLMLLLVPLMGITLGALAIAGDRERGALEFWLTQPVSTATFFLAKALGMGAALAAAVLV
HHHHHHHHHHHHHHHHHHHHCCCCCCCCEEEEECCCHHHHHHHHHHHHCCHHHHHHHHHH
GFGASSVVLLLVGATDPFAFLALAGLTVLLAWASLALGLLLSSRCARTSTAVSLGLGAWL
HCCCHHEEEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
LLVLLGDLGLMGTALAVRLPPAWLLAIALGNPVETYRIAALRLLAGTLELLGPAGLYADE
HHHHHHHHHHHHHHHHHCCCHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCH
RFGASLWILLPTTLLLWIAAGTGFAYIVLRREVSR
HCCCCHHHHHHHHHHHHHHHCCCCEEEEEEHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 2170125 [H]