Definition Thermomicrobium roseum DSM 5159 plasmid unnamed, complete sequence.
Accession NC_011961
Length 917,738

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The map label for this gene is 221635537

Identifier: 221635537

GI number: 221635537

Start: 125704

End: 126303

Strand: Reverse

Name: 221635537

Synonym: trd_A0131

Alternate gene names: NA

Gene position: 126303-125704 (Counterclockwise)

Preceding gene: 221635540

Following gene: 221635536

Centisome position: 13.76

GC content: 64.33

Gene sequence:

>600_bases
ATGCAGTGCCAAAGTGTTCAAGATATCATCTCTATTGCCGCCACTGCTGAAGCGCTGGCAGTGACAGTGATCGGTGAGGC
GCTCGCGGCCGCTGAGCGCGGTGAGCTGGCCTTGACCGAGGATGAGCGGACGTTTCTGCGAGCGGCCCGCGCGGCGGAGC
AGGCGCACTACGAGGTGCTCACTGCTGCCGGTGCCAAGCCGCTCACGCTCGTCTTCACCGTGCCCGATACCCGTGCCGTG
AGCGATCCCGTCTTGCTTCTCCGTACGGCGATCGGCTTGGAGGAGGCCTTCATCGCCGCCTACTGCGCCGCTGCTCAGCA
GTTCGCGAGCCTCGGTCAGCCCGACCTCGTGCGTGTCGCTGTCCAGATCGGTGGAGTCGAGGCAGAGCATCGAGCTTTGC
TTCGCCACTTCGCGATCCTGCGTGGTGCTCTTGGCGGCGTCCCGGATGACGTCGCCTACCAGAAAGCGTTGTTTTCCAGT
GTGGGGAGTGCGGCCGATGCCCTGATCCAACTCGGCTGGATCGGTGGATCCGGACCGGAAATCCGTTATCCCGGACCTGG
AGCGATCGACACGCGGGGAGTCAAGCAGCTCCGTCCGTGA

Upstream 100 bases:

>100_bases
GAAAGGAGGATCCGGATCATTTCGGATTGACGGTGCCCGTTCATGGTGGTAGAAAATTCTGCTCTCCAGCAGTGATCGGA
AGTGGAAAGGATGGGAGTGT

Downstream 100 bases:

>100_bases
CAACTGGCGAAGACATCGGAGAAGAAGGCAAAAGGAGGTCGTGCGATGTCACATGCGTTAGAGCTCCCTGCTTCGCTGCA
GGAACAGCGCCTGACCCGCC

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 199; Mature: 199

Protein sequence:

>199_residues
MQCQSVQDIISIAATAEALAVTVIGEALAAAERGELALTEDERTFLRAARAAEQAHYEVLTAAGAKPLTLVFTVPDTRAV
SDPVLLLRTAIGLEEAFIAAYCAAAQQFASLGQPDLVRVAVQIGGVEAEHRALLRHFAILRGALGGVPDDVAYQKALFSS
VGSAADALIQLGWIGGSGPEIRYPGPGAIDTRGVKQLRP

Sequences:

>Translated_199_residues
MQCQSVQDIISIAATAEALAVTVIGEALAAAERGELALTEDERTFLRAARAAEQAHYEVLTAAGAKPLTLVFTVPDTRAV
SDPVLLLRTAIGLEEAFIAAYCAAAQQFASLGQPDLVRVAVQIGGVEAEHRALLRHFAILRGALGGVPDDVAYQKALFSS
VGSAADALIQLGWIGGSGPEIRYPGPGAIDTRGVKQLRP
>Mature_199_residues
MQCQSVQDIISIAATAEALAVTVIGEALAAAERGELALTEDERTFLRAARAAEQAHYEVLTAAGAKPLTLVFTVPDTRAV
SDPVLLLRTAIGLEEAFIAAYCAAAQQFASLGQPDLVRVAVQIGGVEAEHRALLRHFAILRGALGGVPDDVAYQKALFSS
VGSAADALIQLGWIGGSGPEIRYPGPGAIDTRGVKQLRP

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 20771; Mature: 20771

Theoretical pI: Translated: 4.83; Mature: 4.83

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.0 %Cys     (Translated Protein)
0.5 %Met     (Translated Protein)
1.5 %Cys+Met (Translated Protein)
1.0 %Cys     (Mature Protein)
0.5 %Met     (Mature Protein)
1.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MQCQSVQDIISIAATAEALAVTVIGEALAAAERGELALTEDERTFLRAARAAEQAHYEVL
CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEECHHHHHHHHHHHHHHHHHHHH
TAAGAKPLTLVFTVPDTRAVSDPVLLLRTAIGLEEAFIAAYCAAAQQFASLGQPDLVRVA
HHCCCCCEEEEEECCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHH
VQIGGVEAEHRALLRHFAILRGALGGVPDDVAYQKALFSSVGSAADALIQLGWIGGSGPE
HHHCCCCHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCC
IRYPGPGAIDTRGVKQLRP
EECCCCCCCCCCCHHHCCC
>Mature Secondary Structure
MQCQSVQDIISIAATAEALAVTVIGEALAAAERGELALTEDERTFLRAARAAEQAHYEVL
CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEECHHHHHHHHHHHHHHHHHHHH
TAAGAKPLTLVFTVPDTRAVSDPVLLLRTAIGLEEAFIAAYCAAAQQFASLGQPDLVRVA
HHCCCCCEEEEEECCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHH
VQIGGVEAEHRALLRHFAILRGALGGVPDDVAYQKALFSSVGSAADALIQLGWIGGSGPE
HHHCCCCHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCC
IRYPGPGAIDTRGVKQLRP
EECCCCCCCCCCCHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA