Click here to switch to the map view.

The map label for this gene is 221635533

Identifier: 221635533

GI number: 221635533

Start: 122972

End: 123310

Strand: Reverse

Name: 221635533

Synonym: trd_A0127

Alternate gene names: NA

Gene position: 123310-122972 (Counterclockwise)

Preceding gene: 221635536

Following gene: 221635531

Centisome position: 13.44

GC content: 69.03

Gene sequence:

>339_bases
GTGCGTCGCACCTGGGCACCTATCGCTGCGCGATCCGTCGAGGAGACTCGACGCGTCTCTGCGCTTCTCGCACCGCTTGC
TTGGGGCGGTAGCGGCGGAGACGCTTGCCCCCGCACTCCACCTCGGAGTGGTGTCGCGCTCGCTGTTCGAACGCCCATGC
GACCCGTTGGCGAGCCTGTCCCGTCCGACCGGCATCCCAGCCGATCGCTCCGCGCGTTGACTGCGACACAGCGCTCGCTG
GTGAGGTTGGGTGAAAGAGCCGGTCCTCGCTCGCGGGATCGGACGGAGGTCGGCGCGCCTGCCCCGAGCGAGAAACGCTC
GCAGTTGGCTCTGCACTGA

Upstream 100 bases:

>100_bases
GTTGCTCGAGCAGGTGGTCGATGGCCATCGGGCGGGTGTCCTCCCTCGTGCCGGGCAAAACCAGCGTCGCGCAAGCAGGA
TTCGCGTCTACTCGATCCTC

Downstream 100 bases:

>100_bases
TTCAGCGCGTGCGAGGTCGGTCCGCTCCTGCTCTGTCCGAGAATCCGTCGAGCTCGGTCCTCGGCTCACACGCCGTGCAA
CGACCCGGCTGCATCGATGG

Product: virion protein US10

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 112; Mature: 112

Protein sequence:

>112_residues
MRRTWAPIAARSVEETRRVSALLAPLAWGGSGGDACPRTPPRSGVALAVRTPMRPVGEPVPSDRHPSRSLRALTATQRSL
VRLGERAGPRSRDRTEVGAPAPSEKRSQLALH

Sequences:

>Translated_112_residues
MRRTWAPIAARSVEETRRVSALLAPLAWGGSGGDACPRTPPRSGVALAVRTPMRPVGEPVPSDRHPSRSLRALTATQRSL
VRLGERAGPRSRDRTEVGAPAPSEKRSQLALH
>Mature_112_residues
MRRTWAPIAARSVEETRRVSALLAPLAWGGSGGDACPRTPPRSGVALAVRTPMRPVGEPVPSDRHPSRSLRALTATQRSL
VRLGERAGPRSRDRTEVGAPAPSEKRSQLALH

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 12048; Mature: 12048

Theoretical pI: Translated: 12.36; Mature: 12.36

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.9 %Cys     (Translated Protein)
1.8 %Met     (Translated Protein)
2.7 %Cys+Met (Translated Protein)
0.9 %Cys     (Mature Protein)
1.8 %Met     (Mature Protein)
2.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRRTWAPIAARSVEETRRVSALLAPLAWGGSGGDACPRTPPRSGVALAVRTPMRPVGEPV
CCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCEEEEEECCCCCCCCCC
PSDRHPSRSLRALTATQRSLVRLGERAGPRSRDRTEVGAPAPSEKRSQLALH
CCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCC
>Mature Secondary Structure
MRRTWAPIAARSVEETRRVSALLAPLAWGGSGGDACPRTPPRSGVALAVRTPMRPVGEPV
CCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCEEEEEECCCCCCCCCC
PSDRHPSRSLRALTATQRSLVRLGERAGPRSRDRTEVGAPAPSEKRSQLALH
CCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA