Definition Thermomicrobium roseum DSM 5159 chromosome, complete genome.
Accession NC_011959
Length 2,003,006

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The map label for this gene is 221633881

Identifier: 221633881

GI number: 221633881

Start: 1918082

End: 1919668

Strand: Reverse

Name: 221633881

Synonym: trd_1908

Alternate gene names: NA

Gene position: 1919668-1918082 (Counterclockwise)

Preceding gene: 221633882

Following gene: 221633880

Centisome position: 95.84

GC content: 70.7

Gene sequence:

>1587_bases
ATGCCCGGCAGTGACCAGCACGGAGCAGCCCGAGGATGGCGCGAGCACCGCGTGCGCGCGCTCGGCCGATGCTCCCTGCT
GGGTGTTCTCACCCTCGCCCCGGTCGTCTTGGCGCTCGCGCTCTATTTGCCCTCGCTCCGCTTCAGCTTTCTCCTGGACG
ACAGCTACGATCTTCTGCTGGCGCGGGAGACGAGTTACCAGGATCTCCTGCTCCGCCCGCTCCCCGGCTTCAGTTACTAC
CGCCCGCTGACCTTCGTCGTCTACAAGCTGGTACACGAACTCGTCGGCGGGCGAGAGCCCTGGCACTATCACGCCCTGGC
GGTGCTCCTCCACGCCACGAACGTGCTCCTGCTCGGCCGGCTCGTCCGGCGACTGGCTGGGCGCAGCGCGTCCACGCTCG
CGGCGGCACTGTTCGCCAGCTTTCCCTTCGCCTATCAGGCCGTGCAGATCGTCTGCTCGTTGCCGCACCTCCTGGTTACC
AGCTGCCTCCTCGGGGCGCTCTTGGCCTGGCTCCGCGCAGGCGACGACACCGAGCGGCGGTGGATCTGGTGCGGGCTCGC
TCTGCTCCTCGCGCTCGCCGCACCCGGCTTGCACGAGACCGGCGCACTGGCTGGCCTGCTGCTCGCCGGCACGCTGGTGC
CCAGGGGGGCTCGGCGCGCCTGGCGCGCTCTCGCTCCATGGCTGGCGAGCGCGCTGGCGGGCAACGGTGCCTACGTCGCG
CTCTGGTTCTGGGGTTTCGCCAAGCCTGGCCCGCGCGCCGTGACCTGGTGGGATCGCCTCCAGAACGTCGTCTTCTGGCT
GCAAGCGGCTGCCTACCCGGTGACGCGCCAGCTCACGGTCCTCGTCGATGCGGAGTGGTTGACCCGCCACGCCTGGAGCG
CCGTCTCCGTCTCCGCGCTCCTCGCGCTCGGCGCTGGGCTCTTCGTCCACGGGCTGGGGGGCCAGGCACGCTCGGCTGCA
GCGATCCTAGTCCTCGGCTTCCTCCTCTTCGCGCCAGTAGTCTGCTTTCTCCCCTTTGCGGGGTACGTCCAGGACGGACC
GCGCCTGCTCTATCCGGTCGCACCGGCTCTCGCGACCTTCTGGGGCATGCTGCCGCGGGCCGGCTGGCGCTGGCCACGCG
GCCGACTGGTCGCGGTGGCGCTCAGCGGCCTGCTGGTCGCGCTGGCCCTCCTGCAAGGGGTGACCTTCGTCGCCCGGCGG
ACCAAGCTGGCCGAGCAGGCGAGCGCAGCGCAGGAAGCTGTCGTTGCCGCTGCACGGGCTGCTCCGTGCTGGCCGCTGGT
CGTCGTGAACGGCCCGGCCTGGCTGGCCTTGCACCGGTACGAGTATCCCCTGGGTCACTTCGGCATGAACGCCCAGCCGA
GCTATCACGGCTACGATGCGCTCCTCCAGGTTCGCCTGGGCTGGCGAACTCCCGTGCGCTCGCTGGCCGTCGAGCCGGCG
ACGCACCAGCGCGACTGGACCTTTGGCCCGCACGGCCAGCCGGGAACACTGGCCGAGGTCGCCGCTCTGCGCCTCGCTGG
CTGGCGCATCCTGCACCTGGTAGCCAGCGAGCGCGGATTCAGCGCGACCGCTTCGGCACCACTGTAG

Upstream 100 bases:

>100_bases
CGGAGGCGGATGCCACGTCTGTCGGTGCGCGGACGCACGAGCGGTTTCCCTGGCCGACTCGGTATCATCCGACCGAGCCA
GCGGAAGGACGGGCAGGCAG

Downstream 100 bases:

>100_bases
AGTTGATCGAGCAGAAGCGGCATTGCATCGACGATCCTCGCCCACTCCACGGCGAATCATGACCTTTGGGCTAGATAACA
CGGATGAGAAAGGCACGTTA

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 528; Mature: 527

Protein sequence:

>528_residues
MPGSDQHGAARGWREHRVRALGRCSLLGVLTLAPVVLALALYLPSLRFSFLLDDSYDLLLARETSYQDLLLRPLPGFSYY
RPLTFVVYKLVHELVGGREPWHYHALAVLLHATNVLLLGRLVRRLAGRSASTLAAALFASFPFAYQAVQIVCSLPHLLVT
SCLLGALLAWLRAGDDTERRWIWCGLALLLALAAPGLHETGALAGLLLAGTLVPRGARRAWRALAPWLASALAGNGAYVA
LWFWGFAKPGPRAVTWWDRLQNVVFWLQAAAYPVTRQLTVLVDAEWLTRHAWSAVSVSALLALGAGLFVHGLGGQARSAA
AILVLGFLLFAPVVCFLPFAGYVQDGPRLLYPVAPALATFWGMLPRAGWRWPRGRLVAVALSGLLVALALLQGVTFVARR
TKLAEQASAAQEAVVAAARAAPCWPLVVVNGPAWLALHRYEYPLGHFGMNAQPSYHGYDALLQVRLGWRTPVRSLAVEPA
THQRDWTFGPHGQPGTLAEVAALRLAGWRILHLVASERGFSATASAPL

Sequences:

>Translated_528_residues
MPGSDQHGAARGWREHRVRALGRCSLLGVLTLAPVVLALALYLPSLRFSFLLDDSYDLLLARETSYQDLLLRPLPGFSYY
RPLTFVVYKLVHELVGGREPWHYHALAVLLHATNVLLLGRLVRRLAGRSASTLAAALFASFPFAYQAVQIVCSLPHLLVT
SCLLGALLAWLRAGDDTERRWIWCGLALLLALAAPGLHETGALAGLLLAGTLVPRGARRAWRALAPWLASALAGNGAYVA
LWFWGFAKPGPRAVTWWDRLQNVVFWLQAAAYPVTRQLTVLVDAEWLTRHAWSAVSVSALLALGAGLFVHGLGGQARSAA
AILVLGFLLFAPVVCFLPFAGYVQDGPRLLYPVAPALATFWGMLPRAGWRWPRGRLVAVALSGLLVALALLQGVTFVARR
TKLAEQASAAQEAVVAAARAAPCWPLVVVNGPAWLALHRYEYPLGHFGMNAQPSYHGYDALLQVRLGWRTPVRSLAVEPA
THQRDWTFGPHGQPGTLAEVAALRLAGWRILHLVASERGFSATASAPL
>Mature_527_residues
PGSDQHGAARGWREHRVRALGRCSLLGVLTLAPVVLALALYLPSLRFSFLLDDSYDLLLARETSYQDLLLRPLPGFSYYR
PLTFVVYKLVHELVGGREPWHYHALAVLLHATNVLLLGRLVRRLAGRSASTLAAALFASFPFAYQAVQIVCSLPHLLVTS
CLLGALLAWLRAGDDTERRWIWCGLALLLALAAPGLHETGALAGLLLAGTLVPRGARRAWRALAPWLASALAGNGAYVAL
WFWGFAKPGPRAVTWWDRLQNVVFWLQAAAYPVTRQLTVLVDAEWLTRHAWSAVSVSALLALGAGLFVHGLGGQARSAAA
ILVLGFLLFAPVVCFLPFAGYVQDGPRLLYPVAPALATFWGMLPRAGWRWPRGRLVAVALSGLLVALALLQGVTFVARRT
KLAEQASAAQEAVVAAARAAPCWPLVVVNGPAWLALHRYEYPLGHFGMNAQPSYHGYDALLQVRLGWRTPVRSLAVEPAT
HQRDWTFGPHGQPGTLAEVAALRLAGWRILHLVASERGFSATASAPL

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 57350; Mature: 57219

Theoretical pI: Translated: 10.52; Mature: 10.52

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.1 %Cys     (Translated Protein)
0.6 %Met     (Translated Protein)
1.7 %Cys+Met (Translated Protein)
1.1 %Cys     (Mature Protein)
0.4 %Met     (Mature Protein)
1.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MPGSDQHGAARGWREHRVRALGRCSLLGVLTLAPVVLALALYLPSLRFSFLLDDSYDLLL
CCCCCCCCHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEEEECCCCCEEE
ARETSYQDLLLRPLPGFSYYRPLTFVVYKLVHELVGGREPWHYHALAVLLHATNVLLLGR
EECCCHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHH
LVRRLAGRSASTLAAALFASFPFAYQAVQIVCSLPHLLVTSCLLGALLAWLRAGDDTERR
HHHHHHCCCHHHHHHHHHHHCCHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHCCCCCCHH
WIWCGLALLLALAAPGLHETGALAGLLLAGTLVPRGARRAWRALAPWLASALAGNGAYVA
HHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHCCCCCEEE
LWFWGFAKPGPRAVTWWDRLQNVVFWLQAAAYPVTRQLTVLVDAEWLTRHAWSAVSVSAL
EEEECCCCCCCCEEHHHHHHHHHHHHHHHHCCCCCEEEEEEEEHHHHHHHHHHHHHHHHH
LALGAGLFVHGLGGQARSAAAILVLGFLLFAPVVCFLPFAGYVQDGPRLLYPVAPALATF
HHHHHHHHEECCCCCHHHHHHHHHHHHHHHHHHHHHHCCHHHHCCCCEEEHHHHHHHHHH
WGMLPRAGWRWPRGRLVAVALSGLLVALALLQGVTFVARRTKLAEQASAAQEAVVAAARA
HHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC
APCWPLVVVNGPAWLALHRYEYPLGHFGMNAQPSYHGYDALLQVRLGWRTPVRSLAVEPA
CCCCEEEEECCCCEEEEEEECCCCCCCCCCCCCCCCCHHHHHHHHHCCCCCHHHHHCCCC
THQRDWTFGPHGQPGTLAEVAALRLAGWRILHLVASERGFSATASAPL
CCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCC
>Mature Secondary Structure 
PGSDQHGAARGWREHRVRALGRCSLLGVLTLAPVVLALALYLPSLRFSFLLDDSYDLLL
CCCCCCCHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEEEECCCCCEEE
ARETSYQDLLLRPLPGFSYYRPLTFVVYKLVHELVGGREPWHYHALAVLLHATNVLLLGR
EECCCHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHH
LVRRLAGRSASTLAAALFASFPFAYQAVQIVCSLPHLLVTSCLLGALLAWLRAGDDTERR
HHHHHHCCCHHHHHHHHHHHCCHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHCCCCCCHH
WIWCGLALLLALAAPGLHETGALAGLLLAGTLVPRGARRAWRALAPWLASALAGNGAYVA
HHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHCCCCCEEE
LWFWGFAKPGPRAVTWWDRLQNVVFWLQAAAYPVTRQLTVLVDAEWLTRHAWSAVSVSAL
EEEECCCCCCCCEEHHHHHHHHHHHHHHHHCCCCCEEEEEEEEHHHHHHHHHHHHHHHHH
LALGAGLFVHGLGGQARSAAAILVLGFLLFAPVVCFLPFAGYVQDGPRLLYPVAPALATF
HHHHHHHHEECCCCCHHHHHHHHHHHHHHHHHHHHHHCCHHHHCCCCEEEHHHHHHHHHH
WGMLPRAGWRWPRGRLVAVALSGLLVALALLQGVTFVARRTKLAEQASAAQEAVVAAARA
HHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC
APCWPLVVVNGPAWLALHRYEYPLGHFGMNAQPSYHGYDALLQVRLGWRTPVRSLAVEPA
CCCCEEEEECCCCEEEEEEECCCCCCCCCCCCCCCCCHHHHHHHHHCCCCCHHHHHCCCC
THQRDWTFGPHGQPGTLAEVAALRLAGWRILHLVASERGFSATASAPL
CCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA