| Definition | Thermomicrobium roseum DSM 5159 chromosome, complete genome. |
|---|---|
| Accession | NC_011959 |
| Length | 2,003,006 |
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The map label for this gene is pstC [H]
Identifier: 221633804
GI number: 221633804
Start: 1840962
End: 1841936
Strand: Reverse
Name: pstC [H]
Synonym: trd_1831
Alternate gene names: 221633804
Gene position: 1841936-1840962 (Counterclockwise)
Preceding gene: 221633805
Following gene: 221633803
Centisome position: 91.96
GC content: 62.36
Gene sequence:
>975_bases GTGACGAGCGAGTCAACTCCTGCTCAACTCGCCACATCGATCGACCGCCGAGAGTGGGTCGAGCGTGTCCTCACCGGCAC GCAACGAATCGACCGGATTCGTCGCGTCCGCGAACGAACGATCCTGACCTTCCTGTTCCTGGCTGCACTGATCTCGATCG CGACGACGATCGGCATCATCTACACGCTCGGGATCGAGACCGTCCGCTTTTTCCAGCGCGTTTCCATCGTCGACTTTTTG ACCGACACGCAATGGACTCCCCTCTTTACCGAGAAGCATTTCGGCATCTGGCCACTGCTCACGGCGACCATTCTGGTCTC GGTCATCGCGATGCTCATCGCCCTACCGATCGGGCTCCTCTCGGCGATCGGGCTCGCGGAATACGCTCCGGACCGTGTCG CCCGCGTCGTCAAGCCGGTTCTGGAGATCCTCGCCGGTGTCCCGACGGTCGTGTATGGCTACTTCGCCCTGCTCTTCGTC ACACCGTTGCTCCAGCGTTTCATCCCGCAGCTCGAGGTGTTCAACGCGCTTTCGGCCGGCCTGGTGATGGGAATCATGAT CGTCCCGCTGGTTGCTTCCCTCTCCGAGGACGCCATGCGGGCAGTCCCGCAGAGTCTCCGCGAGGGTGCCTATGCGCTGG GTGCCACCAAACTCGAGGTCGTCTGGCGCGTCGTGGTACCGTCGTCGCTCTCGGGTATCGTCGCTGCCTTCATTCTGGCG GTCTCGCGGGCAGTCGGCGAGACCATGATCGTGGCCATCGCGATGGGCCAGGTCCCGCGCCTCACCCTCAACCCGCTGGT CGCGATGGAGACGATGACTGCCTACATCGTCCAGGTGAGCCTCGGCGATACTCCGCATGGCACGCTCGAGTACCAGACGA TCTTCGCGGTCGGCACCACACTGTTCGTGATCACGATGGCACTGAATCTCTTGAGCTACCGCTTCCTCAAGCGCTTCCGG GAGGTCTACGAGTGA
Upstream 100 bases:
>100_bases TGAGGAATAGCTTCCCGGAGGTCGAGAAGACCGGGTACAATCCGCGAGCAGGAGGAAGTCCTCCTGCTCGCGGCCGGTCG TTGCCGAGCGAGGGACGGAC
Downstream 100 bases:
>100_bases GTGCCGAGCGGCTTTCCATGACCGAGCGAGAGTTCGATCCTCGCCTACCTTTGCGCAAGCGACTCGGGATGCTCTTCGGC CTCCTCAGCGCGGTCGCGAT
Product: phosphate ABC transporter permease PstC
Products: ADP; phosphate [Cytoplasm]; phosphate [Cytoplasm] [C]
Alternate protein names: NA
Number of amino acids: Translated: 324; Mature: 323
Protein sequence:
>324_residues MTSESTPAQLATSIDRREWVERVLTGTQRIDRIRRVRERTILTFLFLAALISIATTIGIIYTLGIETVRFFQRVSIVDFL TDTQWTPLFTEKHFGIWPLLTATILVSVIAMLIALPIGLLSAIGLAEYAPDRVARVVKPVLEILAGVPTVVYGYFALLFV TPLLQRFIPQLEVFNALSAGLVMGIMIVPLVASLSEDAMRAVPQSLREGAYALGATKLEVVWRVVVPSSLSGIVAAFILA VSRAVGETMIVAIAMGQVPRLTLNPLVAMETMTAYIVQVSLGDTPHGTLEYQTIFAVGTTLFVITMALNLLSYRFLKRFR EVYE
Sequences:
>Translated_324_residues MTSESTPAQLATSIDRREWVERVLTGTQRIDRIRRVRERTILTFLFLAALISIATTIGIIYTLGIETVRFFQRVSIVDFL TDTQWTPLFTEKHFGIWPLLTATILVSVIAMLIALPIGLLSAIGLAEYAPDRVARVVKPVLEILAGVPTVVYGYFALLFV TPLLQRFIPQLEVFNALSAGLVMGIMIVPLVASLSEDAMRAVPQSLREGAYALGATKLEVVWRVVVPSSLSGIVAAFILA VSRAVGETMIVAIAMGQVPRLTLNPLVAMETMTAYIVQVSLGDTPHGTLEYQTIFAVGTTLFVITMALNLLSYRFLKRFR EVYE >Mature_323_residues TSESTPAQLATSIDRREWVERVLTGTQRIDRIRRVRERTILTFLFLAALISIATTIGIIYTLGIETVRFFQRVSIVDFLT DTQWTPLFTEKHFGIWPLLTATILVSVIAMLIALPIGLLSAIGLAEYAPDRVARVVKPVLEILAGVPTVVYGYFALLFVT PLLQRFIPQLEVFNALSAGLVMGIMIVPLVASLSEDAMRAVPQSLREGAYALGATKLEVVWRVVVPSSLSGIVAAFILAV SRAVGETMIVAIAMGQVPRLTLNPLVAMETMTAYIVQVSLGDTPHGTLEYQTIFAVGTTLFVITMALNLLSYRFLKRFRE VYE
Specific function: Part of the binding-protein-dependent transport system yqgGHIJK. Probably responsible for the translocation of the substrate across the membrane [H]
COG id: COG0573
COG function: function code P; ABC-type phosphate transport system, permease component
Gene ontology:
Cell location: Cell membrane; Multi-pass membrane protein [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 1 ABC transmembrane type-1 domain [H]
Homologues:
Organism=Escherichia coli, GI1790164, Length=279, Percent_Identity=29.7491039426523, Blast_Score=107, Evalue=8e-25, Organism=Escherichia coli, GI1790163, Length=223, Percent_Identity=27.8026905829596, Blast_Score=84, Evalue=2e-17,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR000515 - InterPro: IPR011864 [H]
Pfam domain/function: PF00528 BPD_transp_1 [H]
EC number: NA
Molecular weight: Translated: 35720; Mature: 35589
Theoretical pI: Translated: 9.23; Mature: 9.23
Prosite motif: PS50928 ABC_TM1
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 3.1 %Met (Translated Protein) 3.1 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 2.8 %Met (Mature Protein) 2.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTSESTPAQLATSIDRREWVERVLTGTQRIDRIRRVRERTILTFLFLAALISIATTIGII CCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH YTLGIETVRFFQRVSIVDFLTDTQWTPLFTEKHFGIWPLLTATILVSVIAMLIALPIGLL HHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHH SAIGLAEYAPDRVARVVKPVLEILAGVPTVVYGYFALLFVTPLLQRFIPQLEVFNALSAG HHHHHHHHCHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH LVMGIMIVPLVASLSEDAMRAVPQSLREGAYALGATKLEVVWRVVVPSSLSGIVAAFILA HHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHCCHHHHHHHHHHCCCCHHHHHHHHHHH VSRAVGETMIVAIAMGQVPRLTLNPLVAMETMTAYIVQVSLGDTPHGTLEYQTIFAVGTT HHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHEEECCCCCCCCCHHHHHHHHHHH LFVITMALNLLSYRFLKRFREVYE HHHHHHHHHHHHHHHHHHHHHHCC >Mature Secondary Structure TSESTPAQLATSIDRREWVERVLTGTQRIDRIRRVRERTILTFLFLAALISIATTIGII CCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH YTLGIETVRFFQRVSIVDFLTDTQWTPLFTEKHFGIWPLLTATILVSVIAMLIALPIGLL HHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHH SAIGLAEYAPDRVARVVKPVLEILAGVPTVVYGYFALLFVTPLLQRFIPQLEVFNALSAG HHHHHHHHCHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH LVMGIMIVPLVASLSEDAMRAVPQSLREGAYALGATKLEVVWRVVVPSSLSGIVAAFILA HHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHCCHHHHHHHHHHCCCCHHHHHHHHHHH VSRAVGETMIVAIAMGQVPRLTLNPLVAMETMTAYIVQVSLGDTPHGTLEYQTIFAVGTT HHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHEEECCCCCCCCCHHHHHHHHHHH LFVITMALNLLSYRFLKRFREVYE HHHHHHHHHHHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: ATP; phosphate [Periplasm]; H2O [C]
Specific reaction: ATP + phosphate [Periplasm] + H2O = ADP + phosphate [Cytoplasm] + phosphate [Cytoplasm] [C]
General reaction: NA
Inhibitor: NA
Structure determination priority: 7.0
TargetDB status: NA
Availability: NA
References: 8760913; 8969508; 9384377 [H]