| Definition | Thermomicrobium roseum DSM 5159 chromosome, complete genome. |
|---|---|
| Accession | NC_011959 |
| Length | 2,003,006 |
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The map label for this gene is yciI [C]
Identifier: 221633799
GI number: 221633799
Start: 1837252
End: 1837527
Strand: Reverse
Name: yciI [C]
Synonym: trd_1826
Alternate gene names: 221633799
Gene position: 1837527-1837252 (Counterclockwise)
Preceding gene: 221633800
Following gene: 221633798
Centisome position: 91.74
GC content: 61.23
Gene sequence:
>276_bases ATGCTCTGGGCGGCAGTGATCCGCTACGGGAACCCGGACAAGATCAAGGAAGTGCGTCCGGTTCACCGCCAGTACCTCAG CGCACTACGCGAGCGAGGCAAACTGTGGGCCTCGGGGCCGTTCGTCGATGACAGCGGCGCGCTCATCATCTATCAAGCCG AGAGCGAGGAGGAAGCCCGCCAGCTCATCGAGGGAGACCCCTTCTTCGCTGCCGGCGTCTTTCAGGATATCCAGCTCAAA CCGTGGAATATCGTCTTCACACCGCCAGCCTCATGA
Upstream 100 bases:
>100_bases CATCACCGGCGACCCCCGCGCGCTCGTCAGCCCGGGCGAACCGGATTATCCTGGAGAACGGGAGGCCGAGCACGACGTGG AGTGACGAGAGGAGCGAGGA
Downstream 100 bases:
>100_bases CCGAACACGCTGGCCGTGCTACGATCGTGCTGCCGCAAGGGCAGCAGCGGCATGCGTTCACTCGGTTCCTGCCCGGGGAG GCGAAGAATGACGACCGAAA
Product: YCII-like protein
Products: NA
Alternate protein names: YCII-Related; YciI-Like Protein; YCII-Like Protein; YCII-Related Domain Superfamily
Number of amino acids: Translated: 91; Mature: 91
Protein sequence:
>91_residues MLWAAVIRYGNPDKIKEVRPVHRQYLSALRERGKLWASGPFVDDSGALIIYQAESEEEARQLIEGDPFFAAGVFQDIQLK PWNIVFTPPAS
Sequences:
>Translated_91_residues MLWAAVIRYGNPDKIKEVRPVHRQYLSALRERGKLWASGPFVDDSGALIIYQAESEEEARQLIEGDPFFAAGVFQDIQLK PWNIVFTPPAS >Mature_91_residues MLWAAVIRYGNPDKIKEVRPVHRQYLSALRERGKLWASGPFVDDSGALIIYQAESEEEARQLIEGDPFFAAGVFQDIQLK PWNIVFTPPAS
Specific function: Unknown
COG id: COG2350
COG function: function code S; Uncharacterized protein conserved in bacteria
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 10317; Mature: 10317
Theoretical pI: Translated: 5.07; Mature: 5.07
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 1.1 %Met (Translated Protein) 1.1 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 1.1 %Met (Mature Protein) 1.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MLWAAVIRYGNPDKIKEVRPVHRQYLSALRERGKLWASGPFVDDSGALIIYQAESEEEAR CCEEEEEECCCCHHHHHHHHHHHHHHHHHHHCCCEEECCCEECCCCCEEEEECCCHHHHH QLIEGDPFFAAGVFQDIQLKPWNIVFTPPAS HHHCCCCCEECCCCCCCCCCCCEEEECCCCC >Mature Secondary Structure MLWAAVIRYGNPDKIKEVRPVHRQYLSALRERGKLWASGPFVDDSGALIIYQAESEEEAR CCEEEEEECCCCHHHHHHHHHHHHHHHHHHHCCCEEECCCEECCCCCEEEEECCCHHHHH QLIEGDPFFAAGVFQDIQLKPWNIVFTPPAS HHHCCCCCEECCCCCCCCCCCCEEEECCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA