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The map label for this gene is gatC

Identifier: 221633730

GI number: 221633730

Start: 1762739

End: 1763032

Strand: Reverse

Name: gatC

Synonym: trd_1757

Alternate gene names: 221633730

Gene position: 1763032-1762739 (Counterclockwise)

Preceding gene: 221633731

Following gene: 221633729

Centisome position: 88.02

GC content: 63.27

Gene sequence:

>294_bases
ATGCGTTTGAGCCGCGAGATCGTCGATCATGTCGCGATGCTGGCACGCCTCGGCTTGACCGAGGAAGAGCGCGAGCTGAT
GCGCGAGCAGCTCTCGTCGATCCTCGAGCACGTGAGTCGCATTCAGGAACTCGATACCGAGGCGATCCCGCCCACCGCGC
AGGTCATCACGCTCCAGAATGTCTGGCGCGAGGACGACGTCCGGCCATCCCTGCCGGTGGAAGCTGTCCTGGCCAACGCT
CCGGAAAGCGAAGATGGCTTCTTCCGGGTCCATGCGGTGCTCGAGCAGAGTTGA

Upstream 100 bases:

>100_bases
CGAGCTTTTCCTGGTACCGCGATATCGTAGCCCGCAACGCGCTCGTCGAGGGATGAGCCGGGACGTGGTACACTGCCGCC
CGGCAGAGGGAGGTTCGGCG

Downstream 100 bases:

>100_bases
GGGGGCACTGTGACCAGCGAACTCGTTCGCCTGACCGCTGTGGAGGCCCGCGCGCTGCTCGATCGACGCGAGATCAGCGC
TCTGGAATTGCTCGAGGCGC

Product: glutamyl-tRNA(Gln) amidotransferase subunit C

Products: NA

Alternate protein names: Asp/Glu-ADT subunit C

Number of amino acids: Translated: 97; Mature: 97

Protein sequence:

>97_residues
MRLSREIVDHVAMLARLGLTEEERELMREQLSSILEHVSRIQELDTEAIPPTAQVITLQNVWREDDVRPSLPVEAVLANA
PESEDGFFRVHAVLEQS

Sequences:

>Translated_97_residues
MRLSREIVDHVAMLARLGLTEEERELMREQLSSILEHVSRIQELDTEAIPPTAQVITLQNVWREDDVRPSLPVEAVLANA
PESEDGFFRVHAVLEQS
>Mature_97_residues
MRLSREIVDHVAMLARLGLTEEERELMREQLSSILEHVSRIQELDTEAIPPTAQVITLQNVWREDDVRPSLPVEAVLANA
PESEDGFFRVHAVLEQS

Specific function: Allows the formation of correctly charged Asn-tRNA(Asn) or Gln-tRNA(Gln) through the transamidation of misacylated Asp- tRNA(Asn) or Glu-tRNA(Gln) in organisms which lack either or both of asparaginyl-tRNA or glutaminyl-tRNA synthetases. The reaction take

COG id: COG0721

COG function: function code J; Asp-tRNAAsn/Glu-tRNAGln amidotransferase C subunit

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the gatC family

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): GATC_THERP (B9L146)

Other databases:

- EMBL:   CP001275
- RefSeq:   YP_002522956.1
- GeneID:   7355510
- GenomeReviews:   CP001275_GR
- KEGG:   tro:trd_1757
- OMA:   PTSHAVP
- ProtClustDB:   CLSK2808162
- GO:   GO:0006412
- HAMAP:   MF_00122
- InterPro:   IPR003837
- TIGRFAMs:   TIGR00135

Pfam domain/function: PF02686 Glu-tRNAGln

EC number: 6.3.5.-

Molecular weight: Translated: 11059; Mature: 11059

Theoretical pI: Translated: 4.30; Mature: 4.30

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
3.1 %Met     (Translated Protein)
3.1 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
3.1 %Met     (Mature Protein)
3.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRLSREIVDHVAMLARLGLTEEERELMREQLSSILEHVSRIQELDTEAIPPTAQVITLQN
CCCHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHH
VWREDDVRPSLPVEAVLANAPESEDGFFRVHAVLEQS
HHCCCCCCCCCCHHHHHHCCCCCCCCHHHHHHHHHCC
>Mature Secondary Structure
MRLSREIVDHVAMLARLGLTEEERELMREQLSSILEHVSRIQELDTEAIPPTAQVITLQN
CCCHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHH
VWREDDVRPSLPVEAVLANAPESEDGFFRVHAVLEQS
HHCCCCCCCCCCHHHHHHCCCCCCCCHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA