| Definition | Thermomicrobium roseum DSM 5159 chromosome, complete genome. |
|---|---|
| Accession | NC_011959 |
| Length | 2,003,006 |
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The map label for this gene is 221633526
Identifier: 221633526
GI number: 221633526
Start: 1529637
End: 1529915
Strand: Reverse
Name: 221633526
Synonym: trd_1548
Alternate gene names: NA
Gene position: 1529915-1529637 (Counterclockwise)
Preceding gene: 221633528
Following gene: 221633524
Centisome position: 76.38
GC content: 65.59
Gene sequence:
>279_bases ATGGAGCAGCGTTGCGGCATCTACCGACCGGCCGATGGGAAACCACGCGTCGGTCGAGGAAGCCTGCTTCTCACTCCTGC CCGACTGCGAGAGCTGGACGTTCAGCGGTGGCCTGCGCGCACGCTGAGCGAGCTTCTCGCGACAGTGCACGGAGAACGAG CGAGCTTTGTCCAGCGTGCGCAGCGTTCCCCTGCGCCTGTCCTGAGGAGGTTGCCAGCCGACACGCGTTCCTGGCTGTCA CTGGACCGTGCCAGCTCGGTGGCTGAGCTGGTGAGTTGA
Upstream 100 bases:
>100_bases GATCGATCCGCGCTGCCTGTGGTGACTCCTGGCGAATGACAGGATGCACTCGACGAGTCTCTCCGAGCGAGTCGGTCTTG CTCGGCCGTCGAGTCCGCCG
Downstream 100 bases:
>100_bases CTGGCTCGTTCAGAGTTGCCAATAGCGCGACAAGACCTGACGAGCAGCCTCGATCGCTGCCTCCTGATCAGGGCGGAACT CCCGCTCAGCCTGCGAGAGC
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 92; Mature: 92
Protein sequence:
>92_residues MEQRCGIYRPADGKPRVGRGSLLLTPARLRELDVQRWPARTLSELLATVHGERASFVQRAQRSPAPVLRRLPADTRSWLS LDRASSVAELVS
Sequences:
>Translated_92_residues MEQRCGIYRPADGKPRVGRGSLLLTPARLRELDVQRWPARTLSELLATVHGERASFVQRAQRSPAPVLRRLPADTRSWLS LDRASSVAELVS >Mature_92_residues MEQRCGIYRPADGKPRVGRGSLLLTPARLRELDVQRWPARTLSELLATVHGERASFVQRAQRSPAPVLRRLPADTRSWLS LDRASSVAELVS
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 10304; Mature: 10304
Theoretical pI: Translated: 11.91; Mature: 11.91
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.1 %Cys (Translated Protein) 1.1 %Met (Translated Protein) 2.2 %Cys+Met (Translated Protein) 1.1 %Cys (Mature Protein) 1.1 %Met (Mature Protein) 2.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MEQRCGIYRPADGKPRVGRGSLLLTPARLRELDVQRWPARTLSELLATVHGERASFVQRA CCCCCCCCCCCCCCCCCCCCCEEECHHHHHHHHHHCCCHHHHHHHHHHHCCCHHHHHHHH QRSPAPVLRRLPADTRSWLSLDRASSVAELVS CCCCHHHHHHCCCCHHHHHHHHHHHHHHHHHC >Mature Secondary Structure MEQRCGIYRPADGKPRVGRGSLLLTPARLRELDVQRWPARTLSELLATVHGERASFVQRA CCCCCCCCCCCCCCCCCCCCCEEECHHHHHHHHHHCCCHHHHHHHHHHHCCCHHHHHHHH QRSPAPVLRRLPADTRSWLSLDRASSVAELVS CCCCHHHHHHCCCCHHHHHHHHHHHHHHHHHC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA