Definition Thermomicrobium roseum DSM 5159 chromosome, complete genome.
Accession NC_011959
Length 2,003,006

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The map label for this gene is 221633526

Identifier: 221633526

GI number: 221633526

Start: 1529637

End: 1529915

Strand: Reverse

Name: 221633526

Synonym: trd_1548

Alternate gene names: NA

Gene position: 1529915-1529637 (Counterclockwise)

Preceding gene: 221633528

Following gene: 221633524

Centisome position: 76.38

GC content: 65.59

Gene sequence:

>279_bases
ATGGAGCAGCGTTGCGGCATCTACCGACCGGCCGATGGGAAACCACGCGTCGGTCGAGGAAGCCTGCTTCTCACTCCTGC
CCGACTGCGAGAGCTGGACGTTCAGCGGTGGCCTGCGCGCACGCTGAGCGAGCTTCTCGCGACAGTGCACGGAGAACGAG
CGAGCTTTGTCCAGCGTGCGCAGCGTTCCCCTGCGCCTGTCCTGAGGAGGTTGCCAGCCGACACGCGTTCCTGGCTGTCA
CTGGACCGTGCCAGCTCGGTGGCTGAGCTGGTGAGTTGA

Upstream 100 bases:

>100_bases
GATCGATCCGCGCTGCCTGTGGTGACTCCTGGCGAATGACAGGATGCACTCGACGAGTCTCTCCGAGCGAGTCGGTCTTG
CTCGGCCGTCGAGTCCGCCG

Downstream 100 bases:

>100_bases
CTGGCTCGTTCAGAGTTGCCAATAGCGCGACAAGACCTGACGAGCAGCCTCGATCGCTGCCTCCTGATCAGGGCGGAACT
CCCGCTCAGCCTGCGAGAGC

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 92; Mature: 92

Protein sequence:

>92_residues
MEQRCGIYRPADGKPRVGRGSLLLTPARLRELDVQRWPARTLSELLATVHGERASFVQRAQRSPAPVLRRLPADTRSWLS
LDRASSVAELVS

Sequences:

>Translated_92_residues
MEQRCGIYRPADGKPRVGRGSLLLTPARLRELDVQRWPARTLSELLATVHGERASFVQRAQRSPAPVLRRLPADTRSWLS
LDRASSVAELVS
>Mature_92_residues
MEQRCGIYRPADGKPRVGRGSLLLTPARLRELDVQRWPARTLSELLATVHGERASFVQRAQRSPAPVLRRLPADTRSWLS
LDRASSVAELVS

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 10304; Mature: 10304

Theoretical pI: Translated: 11.91; Mature: 11.91

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.1 %Cys     (Translated Protein)
1.1 %Met     (Translated Protein)
2.2 %Cys+Met (Translated Protein)
1.1 %Cys     (Mature Protein)
1.1 %Met     (Mature Protein)
2.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MEQRCGIYRPADGKPRVGRGSLLLTPARLRELDVQRWPARTLSELLATVHGERASFVQRA
CCCCCCCCCCCCCCCCCCCCCEEECHHHHHHHHHHCCCHHHHHHHHHHHCCCHHHHHHHH
QRSPAPVLRRLPADTRSWLSLDRASSVAELVS
CCCCHHHHHHCCCCHHHHHHHHHHHHHHHHHC
>Mature Secondary Structure
MEQRCGIYRPADGKPRVGRGSLLLTPARLRELDVQRWPARTLSELLATVHGERASFVQRA
CCCCCCCCCCCCCCCCCCCCCEEECHHHHHHHHHHCCCHHHHHHHHHHHCCCHHHHHHHH
QRSPAPVLRRLPADTRSWLSLDRASSVAELVS
CCCCHHHHHHCCCCHHHHHHHHHHHHHHHHHC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA