| Definition | Thermomicrobium roseum DSM 5159 chromosome, complete genome. |
|---|---|
| Accession | NC_011959 |
| Length | 2,003,006 |
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The map label for this gene is 221633492
Identifier: 221633492
GI number: 221633492
Start: 1495353
End: 1495649
Strand: Reverse
Name: 221633492
Synonym: trd_1514
Alternate gene names: NA
Gene position: 1495649-1495353 (Counterclockwise)
Preceding gene: 221633493
Following gene: 221633490
Centisome position: 74.67
GC content: 65.99
Gene sequence:
>297_bases ATGAGCGAGCAGCGACCAGGCGAGCAAACGCGCATCGTCCTGCGCAGTTTCGGCGTCATGGTGACGACGTTCGAGGAGCA GATGACGCAGCTGCTCGAGCGAACGCAGCGGAACGACCTGACCCTGGACGATGCGCTGGAGCTCGCTGCCCAAGCCCTGG CACTCTCGATGCGCCTGTCCCGCCGGTTGCGTGAGGTGAACGAACTGGTTCTCTCCCTCCAGGAGCGCTCGCTGGGGGAA CTCCGCGCACGGCTGGCCCAGCGGTTTCCAGCGATGCCCGCTGAGCCGGAGGAGTAA
Upstream 100 bases:
>100_bases CTCCCACCGCTGATCTTGTCGCGCGACGAAGTCGACCTAGCGGTCGCGCGTATCGCGCAGGCACTCGATGCGGTCCGCGA GCGCTGAACGTGGGGGTGCG
Downstream 100 bases:
>100_bases CGCACTCGGCGATCGGCGACCTTTCGGGGCACGTGTTGTGCTGGCCGAGACCAGCGGACGAGGGTCCTGCTGTGGTAGGG GGCTGGCTCGCTCACCTGCC
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 98; Mature: 97
Protein sequence:
>98_residues MSEQRPGEQTRIVLRSFGVMVTTFEEQMTQLLERTQRNDLTLDDALELAAQALALSMRLSRRLREVNELVLSLQERSLGE LRARLAQRFPAMPAEPEE
Sequences:
>Translated_98_residues MSEQRPGEQTRIVLRSFGVMVTTFEEQMTQLLERTQRNDLTLDDALELAAQALALSMRLSRRLREVNELVLSLQERSLGE LRARLAQRFPAMPAEPEE >Mature_97_residues SEQRPGEQTRIVLRSFGVMVTTFEEQMTQLLERTQRNDLTLDDALELAAQALALSMRLSRRLREVNELVLSLQERSLGEL RARLAQRFPAMPAEPEE
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 11284; Mature: 11153
Theoretical pI: Translated: 4.72; Mature: 4.72
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 5.1 %Met (Translated Protein) 5.1 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 4.1 %Met (Mature Protein) 4.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSEQRPGEQTRIVLRSFGVMVTTFEEQMTQLLERTQRNDLTLDDALELAAQALALSMRLS CCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHH RRLREVNELVLSLQERSLGELRARLAQRFPAMPAEPEE HHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCC >Mature Secondary Structure SEQRPGEQTRIVLRSFGVMVTTFEEQMTQLLERTQRNDLTLDDALELAAQALALSMRLS CCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHH RRLREVNELVLSLQERSLGELRARLAQRFPAMPAEPEE HHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA