| Definition | Thermomicrobium roseum DSM 5159 chromosome, complete genome. |
|---|---|
| Accession | NC_011959 |
| Length | 2,003,006 |
Click here to switch to the map view.
The map label for this gene is 221633445
Identifier: 221633445
GI number: 221633445
Start: 1454208
End: 1454441
Strand: Reverse
Name: 221633445
Synonym: trd_1467
Alternate gene names: NA
Gene position: 1454441-1454208 (Counterclockwise)
Preceding gene: 221633446
Following gene: 221633444
Centisome position: 72.61
GC content: 61.54
Gene sequence:
>234_bases ATGATCGACGGTTGCGGTGCGTTCTCCTGCGCCGATCGGAAGAGTCCTTGTCTTCTTGCATCGCTGTTCGCAGTGCCCAC GAGAGACGATTGCCTTGCCCCGTCTGTCGTTCCACGTCAGCTGCGCCCGGTGTCACTCGCTGGACTGCTCAACCTCGATG CCGATCGTTGCACTGCGCTCGTGCTCGGTTCGGGATACGCGCGAGGGCGCTTGCAAGTGAATCCCGCAGTGTGA
Upstream 100 bases:
>100_bases GAGTGATTCCCGGCGGGTGTCTCGTATCGAGACGTGAGCGAGGACTGGGAAGTTCTGAGTTGACTGTCGGTTGCGTGCAC ACTGCAGCACTGCAATCGGC
Downstream 100 bases:
>100_bases AAGCACAGCGAACCATTCCACCGGAGAGGAAACGGCCTGCGCCATGCTACGGTGGCTGGTCGGCACCGTCGAAGATGCTC CCAGCTCTCCCAGAGGATAG
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 77; Mature: 77
Protein sequence:
>77_residues MIDGCGAFSCADRKSPCLLASLFAVPTRDDCLAPSVVPRQLRPVSLAGLLNLDADRCTALVLGSGYARGRLQVNPAV
Sequences:
>Translated_77_residues MIDGCGAFSCADRKSPCLLASLFAVPTRDDCLAPSVVPRQLRPVSLAGLLNLDADRCTALVLGSGYARGRLQVNPAV >Mature_77_residues MIDGCGAFSCADRKSPCLLASLFAVPTRDDCLAPSVVPRQLRPVSLAGLLNLDADRCTALVLGSGYARGRLQVNPAV
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 8044; Mature: 8044
Theoretical pI: Translated: 8.21; Mature: 8.21
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
6.5 %Cys (Translated Protein) 1.3 %Met (Translated Protein) 7.8 %Cys+Met (Translated Protein) 6.5 %Cys (Mature Protein) 1.3 %Met (Mature Protein) 7.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MIDGCGAFSCADRKSPCLLASLFAVPTRDDCLAPSVVPRQLRPVSLAGLLNLDADRCTAL CCCCCCCCCCCCCCCCEEEEHHHCCCCCCCCCCCCCCCCCCCCEEEEEEEECCCCCEEEE VLGSGYARGRLQVNPAV EECCCCCCCEEEECCCC >Mature Secondary Structure MIDGCGAFSCADRKSPCLLASLFAVPTRDDCLAPSVVPRQLRPVSLAGLLNLDADRCTAL CCCCCCCCCCCCCCCCEEEEHHHCCCCCCCCCCCCCCCCCCCCEEEEEEEECCCCCEEEE VLGSGYARGRLQVNPAV EECCCCCCCEEEECCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA