Definition Thermomicrobium roseum DSM 5159 chromosome, complete genome.
Accession NC_011959
Length 2,003,006

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The map label for this gene is 221633226

Identifier: 221633226

GI number: 221633226

Start: 1229919

End: 1230569

Strand: Reverse

Name: 221633226

Synonym: trd_1244

Alternate gene names: NA

Gene position: 1230569-1229919 (Counterclockwise)

Preceding gene: 221633227

Following gene: 221633224

Centisome position: 61.44

GC content: 63.59

Gene sequence:

>651_bases
GTGGCGAACGCGATCACCGCTGGGCGCATCGCCCTCCTTTTCCTCGGTATCGGCATGCTTTACACGCAGCGGGTGTGGAC
GCTCGGTCTGGCCATCGTCATCTTGCTCGTCGTCTTCGTGGCGGATGCGCTCGATGGGATCGTCGCGCGCCGGCGTGGGC
GAGAGACGGTATTCGGCGCGGTATTCGATATCGCTGGTGATCGCGTGGTGGAAAATGCGCTGTGGGTGGTCTTCGCCGAT
CTCGGCGTGATCGGCGTCTGGGCACCGCTGCTCGTGCTGACGCGCGGTTTTCTCGTTGATGGACTGCGCAGTGTCGCGCT
GCAAGCGGGACGCACGCCTTTCGGTGAGCGCTCCATGGCACGCACGCCGATCACTCGTTTCCTGACTGCCTCGCGGTGCA
TGCGGGCGCTGTACGGTACGGCCAAGTTGGTGGCATTCCTCTTTCTCGCTGGTGTAGTCGCGACTAGGCGTGCGGAGTTC
CCGATCATCGACCGACTCTTCGTCGAACCGGTGTTTCTGCTCGCTGGGTGGCTCTGCGTGTATCTCACGCTGGTCTTGAC
GGTCGCGCGAGGATTACCGGTCGTTGTCGATGCGTGGCCCTACCTCGGCTGGACACGGGAAGAATTCGCTCGCGACCGAC
GCTCGGGCTGA

Upstream 100 bases:

>100_bases
CGGCTTGGCTGCTACTCGGGGGGACGATCATCGTGCTGGTCCTCGTCTGGATCGCTCTCCTCGTGATCACGCTCTGAAGA
CAAGGAGCAGGGGCTGGATC

Downstream 100 bases:

>100_bases
GCGGTGAGCGCATGCGAGGCGATCGTTTCGGGCGAGCGCTGCGTCTCCCTCTCCTGGAACGTCCGGCCTGTTGGGTGGTC
GATCGCATCGGAGAAGCTGC

Product: CDP-alcohol phosphatidyltransferase family

Products: NA

Alternate protein names: CDP-Alcohol Phosphatidyltransferase Family

Number of amino acids: Translated: 216; Mature: 215

Protein sequence:

>216_residues
MANAITAGRIALLFLGIGMLYTQRVWTLGLAIVILLVVFVADALDGIVARRRGRETVFGAVFDIAGDRVVENALWVVFAD
LGVIGVWAPLLVLTRGFLVDGLRSVALQAGRTPFGERSMARTPITRFLTASRCMRALYGTAKLVAFLFLAGVVATRRAEF
PIIDRLFVEPVFLLAGWLCVYLTLVLTVARGLPVVVDAWPYLGWTREEFARDRRSG

Sequences:

>Translated_216_residues
MANAITAGRIALLFLGIGMLYTQRVWTLGLAIVILLVVFVADALDGIVARRRGRETVFGAVFDIAGDRVVENALWVVFAD
LGVIGVWAPLLVLTRGFLVDGLRSVALQAGRTPFGERSMARTPITRFLTASRCMRALYGTAKLVAFLFLAGVVATRRAEF
PIIDRLFVEPVFLLAGWLCVYLTLVLTVARGLPVVVDAWPYLGWTREEFARDRRSG
>Mature_215_residues
ANAITAGRIALLFLGIGMLYTQRVWTLGLAIVILLVVFVADALDGIVARRRGRETVFGAVFDIAGDRVVENALWVVFADL
GVIGVWAPLLVLTRGFLVDGLRSVALQAGRTPFGERSMARTPITRFLTASRCMRALYGTAKLVAFLFLAGVVATRRAEFP
IIDRLFVEPVFLLAGWLCVYLTLVLTVARGLPVVVDAWPYLGWTREEFARDRRSG

Specific function: Unknown

COG id: COG0558

COG function: function code I; Phosphatidylglycerophosphate synthase

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 23757; Mature: 23625

Theoretical pI: Translated: 11.04; Mature: 11.04

Prosite motif: PS00379 CDP_ALCOHOL_P_TRANSF

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.9 %Cys     (Translated Protein)
1.9 %Met     (Translated Protein)
2.8 %Cys+Met (Translated Protein)
0.9 %Cys     (Mature Protein)
1.4 %Met     (Mature Protein)
2.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MANAITAGRIALLFLGIGMLYTQRVWTLGLAIVILLVVFVADALDGIVARRRGRETVFGA
CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHH
VFDIAGDRVVENALWVVFADLGVIGVWAPLLVLTRGFLVDGLRSVALQAGRTPFGERSMA
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHH
RTPITRFLTASRCMRALYGTAKLVAFLFLAGVVATRRAEFPIIDRLFVEPVFLLAGWLCV
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHH
YLTLVLTVARGLPVVVDAWPYLGWTREEFARDRRSG
HHHHHHHHHCCCCEEEECCCCCCCCHHHHHHHHCCC
>Mature Secondary Structure 
ANAITAGRIALLFLGIGMLYTQRVWTLGLAIVILLVVFVADALDGIVARRRGRETVFGA
CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHH
VFDIAGDRVVENALWVVFADLGVIGVWAPLLVLTRGFLVDGLRSVALQAGRTPFGERSMA
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHH
RTPITRFLTASRCMRALYGTAKLVAFLFLAGVVATRRAEFPIIDRLFVEPVFLLAGWLCV
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHH
YLTLVLTVARGLPVVVDAWPYLGWTREEFARDRRSG
HHHHHHHHHCCCCEEEECCCCCCCCHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA