| Definition | Thermomicrobium roseum DSM 5159 chromosome, complete genome. |
|---|---|
| Accession | NC_011959 |
| Length | 2,003,006 |
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The map label for this gene is mprF [H]
Identifier: 221633005
GI number: 221633005
Start: 976651
End: 979422
Strand: Reverse
Name: mprF [H]
Synonym: trd_1014
Alternate gene names: 221633005
Gene position: 979422-976651 (Counterclockwise)
Preceding gene: 221633006
Following gene: 221633004
Centisome position: 48.9
GC content: 59.13
Gene sequence:
>2772_bases ATGACCCATCCGCTCGCCCGCCGCGGGGTGGAGCAGCGGCAGCTCGCTGGGCTCATAACCCAGAGGTCGTGGGTTCGAAT CCCACCCCCGCTACCAGAACGACGAGCCCTCGGCAGCACTGCCGAGGGCTCGTCACATGAGGAGGACGACGTGTCGGGCG ATTTCTCGATTTCAGGCAGCTGGTCCCGGTTTCGCGCGTTTGCCGCCCGAGCGTGGTTTTTCATCTTCGTTTTGCTGGTG ACCTTGTTTCTCTTGCGGCATCGAACTGAACTGGCGGAATTGCGTCATTTCCCAATTGTCCGACCACAATGGCTACTCCT GACCAGTGCTGCCCAAGGGCTCGTTCTGCTGTCCATCATCTGGCAATTGCGTCTCCTGCTCGCTGCTTCGGGGTTTTCTG TACCGCTCTCGAGACTCTTCCGGGCTGATCTCCATCGGGTCGCGGTTAGTACTGTCACCCCAGCTGGCTCGGCAGCCGGC GTCCTGGTCTTCGCGGCGGATCTGCAAGCAGTAGGTGTTCCGACGACAGCAGCAGTGGCTGCCACAGTAACCTATGGTGT CGTGGGATTGTTCTCTTTCCTGCTCTTGCTTCCACTCACTGTTCTGCTCCTCGTCACTCGACAGCTTATCTCACTACCTC TCTCCTTGCTTCTCTTTCTCGGCGCTCTCGTGCCCATCGTGTTGCTTCTCTTGCTACCGTGGGCACTGCGTCACGGTATG CCACGCTTGTCGAGGATGTCGCTCGTTCGGGGATTCGTGGAGACCGCTCGCTGGTACCGAATTTCCGGACTCGGACGAGT TCTCGTCCTGGCACTCGCAGTCGATCTTCTCAATGTTGCCATTCTGTATGGTGGAGTGCGAGTCGTCGGCGGGGCGTTGA CGCTCGCTGAAGCACTCATCGCCTATCAAGGTGCCTATCTCTTTGCATTCCTGATTCCATTCGCGCAGGGAAGCGGAGCG GTCGAACTCGCTGGGACGAGCTTGCTGACGGCTCTGGGTCTCCCTGCACCGACTGCGCTCGCGGCCGTGTTGCTCTGGCG GGCCCATGAACTTTGGTTCCCTTTTCTGCTCGGTACTGCACTCTCGGTGCAGCGGGAGCCGGTGATCCGCCGTGCATTGG ATCGCCTTCCCGCATTACTGCTCCTTTGGTCGGGAATCGTGGGCATGGTCGGGCTTCTCGAACCGCACCATCACCGAGTG GTGCCTCGTCGTCTGGAGACCACTGGACTGCTCGAACCGTGGGAGTTCTCTCGCAATCTCGAATTACTCGTGGCTTTCCT GTCGATCATCATCGCTTGGCAGGTGTGGCGCCGAAAACGTACAGGTTGGCTTGTGGCGACACTGCTGCTTAGCGTTTCGT TGTTCCATCAGTTGATCGGGCGACGCGATGAACTCCTTTTGGCGCTCACAATGCTCGCGCTCGGGCTTCTGCTCGTGCGC TGGCGCACCTATCGAGTTCGGTCAGATATCCCGAGTATTTGGAGGGGATTCGCTCTGGCCGGTCTTGGCCTCACTACCAC GTTGCTCTATGGCACGATCGGGCTCATGCTCTTGAGCCGACACGCGCTCGTTCCCAAGCATCTCTCGTTTTGGGATGCAC TCACGGTACTGATACGATCGGCATGGGGCTTCTTGCCCTGGGCTGTCGAACCAGTGTCGCGTTACGGAGGGTGGTTTCTC GACTCTGTCACGCTGCTCGCGGGTGCATCCCTTCTGAACGCCGCCTGGAGCATCGGGCGGCCGGTGATCTGGCGGTCATG GGGCTACGAATCAGAACGGCAGCGAGCACGAGCCATCATTCAAGCATGCGGCAACTCGTCCCTCGACTTCTTCAAGTTTT GGCCTGACAAGCTCTTCTTCTTCCCGCGAGAAGTGCGTGGAGTGGTGAGTTACCGCATCGTCGGTCGGGTCGCACTGGTA CTCGGTGATCCCAATGTGTGTGGGGAGCGATTCGGGACAGCTCTGGACGGCTTTCTCGATTTCTGCGATCTGAACGACTG GGAACCAGCATTTCATCAAGTTGGGGAGCAGTATCTGGCCGACTACCGTGCGCGAGGGCTGCGATTTTTCAAAATAGGCG AAGAGGCAGTCGTTGATCTCACAACGTGGTCGCTCGATCGCCCAGGGTTGAAAGAGTTGCGCTACCTCGTGCGGAGATCG CAGCGCGAGAACTACCGGTTCGAGGTGCTCGAGCCGCCGCTTCCCGACGATATGGTCGAAGAACTCGCGGACGTCTCCAA TGAATGGTTGTCGCTGCCAGGTCGACGCGAACACGGGTTCACGCAGGGACAATTTTCCCGTGCCTATGTGCGATCGACCC CTGTCGCGCTGATCCGGGATCCGACTGGTAAAGTCGTCGCCTTCGCGAATCTCATACCGAGTGGAGTACCAGGCCAGGCG ACGATCGACCTCATGCGGCGTCGGCACCAGCCGTACGGTGCGATGGATGTCTTGTTCGCCCTGCTCTTCCAGTGGCTGCG TGAGCAGGGATATACATCGTTCTCGCTGGGTCTAGCTCCGCTGAGTGGAGTAGACCTACCGCTTGTGGGGACGGACCCGA TTCGGGAACACTTTTTCCGGCTCATCGAACCATTTTTCTCTGTCCAAGGGCTCCGCCATTTCAAGGCCAAGTTCGATCCT CGCTGGGAACCGCGCTTTCTCGTCTTCCGCTCAGCGAGTGCACTCCCCGCTATCGGATTAGCCCTGTTGAAAGCGACTTC CACCGAGGTCTCGCACGTGGACAGCGATCTTCCCGAGTTGCAGATCGCCTGA
Upstream 100 bases:
>100_bases CCGAACCGGGTCGTGCCCCACACCAGCGCCGGAGAGTACTGCGCGGGCAACCGCGTGGGAGGCGAGGCCGCTGCGCGCAC ACCCGACGAGAAGGTTCGCG
Downstream 100 bases:
>100_bases GTCACCTGTCTCTCCTGGTCAGGCATCCCTCGTATTGGCTAGGTCTCTCATACTTCTCACCTATGTGGCGGGACTTCTCC CGTGCCGTGGAAACGATGAT
Product: hypothetical protein
Products: NA
Alternate protein names: Lysylphosphatidylglycerol synthase; LPG synthase [H]
Number of amino acids: Translated: 923; Mature: 922
Protein sequence:
>923_residues MTHPLARRGVEQRQLAGLITQRSWVRIPPPLPERRALGSTAEGSSHEEDDVSGDFSISGSWSRFRAFAARAWFFIFVLLV TLFLLRHRTELAELRHFPIVRPQWLLLTSAAQGLVLLSIIWQLRLLLAASGFSVPLSRLFRADLHRVAVSTVTPAGSAAG VLVFAADLQAVGVPTTAAVAATVTYGVVGLFSFLLLLPLTVLLLVTRQLISLPLSLLLFLGALVPIVLLLLLPWALRHGM PRLSRMSLVRGFVETARWYRISGLGRVLVLALAVDLLNVAILYGGVRVVGGALTLAEALIAYQGAYLFAFLIPFAQGSGA VELAGTSLLTALGLPAPTALAAVLLWRAHELWFPFLLGTALSVQREPVIRRALDRLPALLLLWSGIVGMVGLLEPHHHRV VPRRLETTGLLEPWEFSRNLELLVAFLSIIIAWQVWRRKRTGWLVATLLLSVSLFHQLIGRRDELLLALTMLALGLLLVR WRTYRVRSDIPSIWRGFALAGLGLTTTLLYGTIGLMLLSRHALVPKHLSFWDALTVLIRSAWGFLPWAVEPVSRYGGWFL DSVTLLAGASLLNAAWSIGRPVIWRSWGYESERQRARAIIQACGNSSLDFFKFWPDKLFFFPREVRGVVSYRIVGRVALV LGDPNVCGERFGTALDGFLDFCDLNDWEPAFHQVGEQYLADYRARGLRFFKIGEEAVVDLTTWSLDRPGLKELRYLVRRS QRENYRFEVLEPPLPDDMVEELADVSNEWLSLPGRREHGFTQGQFSRAYVRSTPVALIRDPTGKVVAFANLIPSGVPGQA TIDLMRRRHQPYGAMDVLFALLFQWLREQGYTSFSLGLAPLSGVDLPLVGTDPIREHFFRLIEPFFSVQGLRHFKAKFDP RWEPRFLVFRSASALPAIGLALLKATSTEVSHVDSDLPELQIA
Sequences:
>Translated_923_residues MTHPLARRGVEQRQLAGLITQRSWVRIPPPLPERRALGSTAEGSSHEEDDVSGDFSISGSWSRFRAFAARAWFFIFVLLV TLFLLRHRTELAELRHFPIVRPQWLLLTSAAQGLVLLSIIWQLRLLLAASGFSVPLSRLFRADLHRVAVSTVTPAGSAAG VLVFAADLQAVGVPTTAAVAATVTYGVVGLFSFLLLLPLTVLLLVTRQLISLPLSLLLFLGALVPIVLLLLLPWALRHGM PRLSRMSLVRGFVETARWYRISGLGRVLVLALAVDLLNVAILYGGVRVVGGALTLAEALIAYQGAYLFAFLIPFAQGSGA VELAGTSLLTALGLPAPTALAAVLLWRAHELWFPFLLGTALSVQREPVIRRALDRLPALLLLWSGIVGMVGLLEPHHHRV VPRRLETTGLLEPWEFSRNLELLVAFLSIIIAWQVWRRKRTGWLVATLLLSVSLFHQLIGRRDELLLALTMLALGLLLVR WRTYRVRSDIPSIWRGFALAGLGLTTTLLYGTIGLMLLSRHALVPKHLSFWDALTVLIRSAWGFLPWAVEPVSRYGGWFL DSVTLLAGASLLNAAWSIGRPVIWRSWGYESERQRARAIIQACGNSSLDFFKFWPDKLFFFPREVRGVVSYRIVGRVALV LGDPNVCGERFGTALDGFLDFCDLNDWEPAFHQVGEQYLADYRARGLRFFKIGEEAVVDLTTWSLDRPGLKELRYLVRRS QRENYRFEVLEPPLPDDMVEELADVSNEWLSLPGRREHGFTQGQFSRAYVRSTPVALIRDPTGKVVAFANLIPSGVPGQA TIDLMRRRHQPYGAMDVLFALLFQWLREQGYTSFSLGLAPLSGVDLPLVGTDPIREHFFRLIEPFFSVQGLRHFKAKFDP RWEPRFLVFRSASALPAIGLALLKATSTEVSHVDSDLPELQIA >Mature_922_residues THPLARRGVEQRQLAGLITQRSWVRIPPPLPERRALGSTAEGSSHEEDDVSGDFSISGSWSRFRAFAARAWFFIFVLLVT LFLLRHRTELAELRHFPIVRPQWLLLTSAAQGLVLLSIIWQLRLLLAASGFSVPLSRLFRADLHRVAVSTVTPAGSAAGV LVFAADLQAVGVPTTAAVAATVTYGVVGLFSFLLLLPLTVLLLVTRQLISLPLSLLLFLGALVPIVLLLLLPWALRHGMP RLSRMSLVRGFVETARWYRISGLGRVLVLALAVDLLNVAILYGGVRVVGGALTLAEALIAYQGAYLFAFLIPFAQGSGAV ELAGTSLLTALGLPAPTALAAVLLWRAHELWFPFLLGTALSVQREPVIRRALDRLPALLLLWSGIVGMVGLLEPHHHRVV PRRLETTGLLEPWEFSRNLELLVAFLSIIIAWQVWRRKRTGWLVATLLLSVSLFHQLIGRRDELLLALTMLALGLLLVRW RTYRVRSDIPSIWRGFALAGLGLTTTLLYGTIGLMLLSRHALVPKHLSFWDALTVLIRSAWGFLPWAVEPVSRYGGWFLD SVTLLAGASLLNAAWSIGRPVIWRSWGYESERQRARAIIQACGNSSLDFFKFWPDKLFFFPREVRGVVSYRIVGRVALVL GDPNVCGERFGTALDGFLDFCDLNDWEPAFHQVGEQYLADYRARGLRFFKIGEEAVVDLTTWSLDRPGLKELRYLVRRSQ RENYRFEVLEPPLPDDMVEELADVSNEWLSLPGRREHGFTQGQFSRAYVRSTPVALIRDPTGKVVAFANLIPSGVPGQAT IDLMRRRHQPYGAMDVLFALLFQWLREQGYTSFSLGLAPLSGVDLPLVGTDPIREHFFRLIEPFFSVQGLRHFKAKFDPR WEPRFLVFRSASALPAIGLALLKATSTEVSHVDSDLPELQIA
Specific function: Catalyzes the transfer of a lysyl group from L-lysyl- tRNA(Lys) to membrane-bound phosphatidylglycerol (PG), which produces lysylphosphatidylglycerol (LPG), one of the components of the bacterial membrane with a positive net charge. LPG synthesis contribu
COG id: COG2898
COG function: function code S; Uncharacterized conserved protein
Gene ontology:
Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the LPG synthase family [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR016181 - InterPro: IPR022791 [H]
Pfam domain/function: PF03706 UPF0104 [H]
EC number: =2.3.2.3 [H]
Molecular weight: Translated: 103026; Mature: 102895
Theoretical pI: Translated: 10.48; Mature: 10.48
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.3 %Cys (Translated Protein) 1.0 %Met (Translated Protein) 1.3 %Cys+Met (Translated Protein) 0.3 %Cys (Mature Protein) 0.9 %Met (Mature Protein) 1.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTHPLARRGVEQRQLAGLITQRSWVRIPPPLPERRALGSTAEGSSHEEDDVSGDFSISGS CCCCHHHCCCHHHHHHHHHHCCCEEECCCCCCCHHHCCCCCCCCCCCCCCCCCCEEECCC WSRFRAFAARAWFFIFVLLVTLFLLRHRTELAELRHFPIVRPQWLLLTSAAQGLVLLSII HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHH WQLRLLLAASGFSVPLSRLFRADLHRVAVSTVTPAGSAAGVLVFAADLQAVGVPTTAAVA HHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCCEEEEECHHHCCCCHHHHHH ATVTYGVVGLFSFLLLLPLTVLLLVTRQLISLPLSLLLFLGALVPIVLLLLLPWALRHGM HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC PRLSRMSLVRGFVETARWYRISGLGRVLVLALAVDLLNVAILYGGVRVVGGALTLAEALI CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHH AYQGAYLFAFLIPFAQGSGAVELAGTSLLTALGLPAPTALAAVLLWRAHELWFPFLLGTA HHHHHHHHHHHHHHHCCCCCEEECHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHH LSVQREPVIRRALDRLPALLLLWSGIVGMVGLLEPHHHRVVPRRLETTGLLEPWEFSRNL HHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHCCCCHHHHHCCCCCCHHHCCCH ELLVAFLSIIIAWQVWRRKRTGWLVATLLLSVSLFHQLIGRRDELLLALTMLALGLLLVR HHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHH WRTYRVRSDIPSIWRGFALAGLGLTTTLLYGTIGLMLLSRHALVPKHLSFWDALTVLIRS HHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHH AWGFLPWAVEPVSRYGGWFLDSVTLLAGASLLNAAWSIGRPVIWRSWGYESERQRARAII HHCCCCHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHCCCCCEEECCCCCHHHHHHHHHH QACGNSSLDFFKFWPDKLFFFPREVRGVVSYRIVGRVALVLGDPNVCGERFGTALDGFLD HHHCCCCCCHHHHCCHHHHHCHHHHHHHHHHHHHHHEEEEECCCCHHHHHHHHHHHHHHH FCDLNDWEPAFHQVGEQYLADYRARGLRFFKIGEEAVVDLTTWSLDRPGLKELRYLVRRS HHCCCCCCHHHHHHHHHHHHHHHHCCEEEEEECCHHEEEEEECCCCCCCHHHHHHHHHHH QRENYRFEVLEPPLPDDMVEELADVSNEWLSLPGRREHGFTQGQFSRAYVRSTPVALIRD HCCCCCEEEECCCCCHHHHHHHHHCCHHHHCCCCCCCCCCCCCHHHHHHHHCCCEEEEEC PTGKVVAFANLIPSGVPGQATIDLMRRRHQPYGAMDVLFALLFQWLREQGYTSFSLGLAP CCCCEEEEHHHCCCCCCCHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHCCCCEEEECCCC LSGVDLPLVGTDPIREHFFRLIEPFFSVQGLRHFKAKFDPRWEPRFLVFRSASALPAIGL CCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCEEEEECCCCCHHHHH ALLKATSTEVSHVDSDLPELQIA HHHHHCCHHHHHHCCCCCCCCCC >Mature Secondary Structure THPLARRGVEQRQLAGLITQRSWVRIPPPLPERRALGSTAEGSSHEEDDVSGDFSISGS CCCHHHCCCHHHHHHHHHHCCCEEECCCCCCCHHHCCCCCCCCCCCCCCCCCCEEECCC WSRFRAFAARAWFFIFVLLVTLFLLRHRTELAELRHFPIVRPQWLLLTSAAQGLVLLSII HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHH WQLRLLLAASGFSVPLSRLFRADLHRVAVSTVTPAGSAAGVLVFAADLQAVGVPTTAAVA HHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCCEEEEECHHHCCCCHHHHHH ATVTYGVVGLFSFLLLLPLTVLLLVTRQLISLPLSLLLFLGALVPIVLLLLLPWALRHGM HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC PRLSRMSLVRGFVETARWYRISGLGRVLVLALAVDLLNVAILYGGVRVVGGALTLAEALI CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHH AYQGAYLFAFLIPFAQGSGAVELAGTSLLTALGLPAPTALAAVLLWRAHELWFPFLLGTA HHHHHHHHHHHHHHHCCCCCEEECHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHH LSVQREPVIRRALDRLPALLLLWSGIVGMVGLLEPHHHRVVPRRLETTGLLEPWEFSRNL HHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHCCCCHHHHHCCCCCCHHHCCCH ELLVAFLSIIIAWQVWRRKRTGWLVATLLLSVSLFHQLIGRRDELLLALTMLALGLLLVR HHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHH WRTYRVRSDIPSIWRGFALAGLGLTTTLLYGTIGLMLLSRHALVPKHLSFWDALTVLIRS HHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHH AWGFLPWAVEPVSRYGGWFLDSVTLLAGASLLNAAWSIGRPVIWRSWGYESERQRARAII HHCCCCHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHCCCCCEEECCCCCHHHHHHHHHH QACGNSSLDFFKFWPDKLFFFPREVRGVVSYRIVGRVALVLGDPNVCGERFGTALDGFLD HHHCCCCCCHHHHCCHHHHHCHHHHHHHHHHHHHHHEEEEECCCCHHHHHHHHHHHHHHH FCDLNDWEPAFHQVGEQYLADYRARGLRFFKIGEEAVVDLTTWSLDRPGLKELRYLVRRS HHCCCCCCHHHHHHHHHHHHHHHHCCEEEEEECCHHEEEEEECCCCCCCHHHHHHHHHHH QRENYRFEVLEPPLPDDMVEELADVSNEWLSLPGRREHGFTQGQFSRAYVRSTPVALIRD HCCCCCEEEECCCCCHHHHHHHHHCCHHHHCCCCCCCCCCCCCHHHHHHHHCCCEEEEEC PTGKVVAFANLIPSGVPGQATIDLMRRRHQPYGAMDVLFALLFQWLREQGYTSFSLGLAP CCCCEEEEHHHCCCCCCCHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHCCCCEEEECCCC LSGVDLPLVGTDPIREHFFRLIEPFFSVQGLRHFKAKFDPRWEPRFLVFRSASALPAIGL CCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCEEEEECCCCCHHHHH ALLKATSTEVSHVDSDLPELQIA HHHHHCCHHHHHHCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 6.0
TargetDB status: NA
Availability: NA
References: 8946165; 9384377 [H]