Definition Thermomicrobium roseum DSM 5159 chromosome, complete genome.
Accession NC_011959
Length 2,003,006

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The map label for this gene is rpmC [H]

Identifier: 221632970

GI number: 221632970

Start: 941204

End: 941491

Strand: Reverse

Name: rpmC [H]

Synonym: trd_0976

Alternate gene names: 221632970

Gene position: 941491-941204 (Counterclockwise)

Preceding gene: 221632971

Following gene: 221632969

Centisome position: 47.0

GC content: 64.24

Gene sequence:

>288_bases
ATGAAACCGGCGGAGCTCCGTGCCCTGACGGACGATCAGCTGCGGCAGAAGCTGGACGAGTTGCGCAACCAGGTGCGCGA
CCTCCGGTTTGCCGCGGCACTGGGCCAGCTGAAAGATACGGCGGCGATTCGCAAGGCGCGGAAGGATATCGCGCGCATCT
TGACGATCCTCAGTGAACGGGAGCGGGCTCGTTTGGCAGAACAGGGGCTGCTTCCGCCACCGAAATTGACCAGGCGCGAG
CGGCGGAAGCGTCGAGAACAGCTTGCGCAGCAGCAGCGAAAGGGGTGA

Upstream 100 bases:

>100_bases
TCGCGCTGGAGGCGCTGACCCGGGCGATTCACAAGTTGCCGTGCCGTTGCCGGATCGTCAAGCGCGAGCGCCCCGGTGAA
GCGGCTGAGGAGGAGGCATC

Downstream 100 bases:

>100_bases
TGCCGAGTGGACGGCCACACGGGTGAGACTCGTGAACCGGGAGCGACCCAACCGCAGCGGCAGAAGCGGCGTTTGACCAA
GGTTGGACGTGTCGTCTCGG

Product: 50S ribosomal protein L29

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 95; Mature: 95

Protein sequence:

>95_residues
MKPAELRALTDDQLRQKLDELRNQVRDLRFAAALGQLKDTAAIRKARKDIARILTILSERERARLAEQGLLPPPKLTRRE
RRKRREQLAQQQRKG

Sequences:

>Translated_95_residues
MKPAELRALTDDQLRQKLDELRNQVRDLRFAAALGQLKDTAAIRKARKDIARILTILSERERARLAEQGLLPPPKLTRRE
RRKRREQLAQQQRKG
>Mature_95_residues
MKPAELRALTDDQLRQKLDELRNQVRDLRFAAALGQLKDTAAIRKARKDIARILTILSERERARLAEQGLLPPPKLTRRE
RRKRREQLAQQQRKG

Specific function: Unknown

COG id: COG0255

COG function: function code J; Ribosomal protein L29

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the ribosomal protein L29P family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001854 [H]

Pfam domain/function: PF00831 Ribosomal_L29 [H]

EC number: NA

Molecular weight: Translated: 11148; Mature: 11148

Theoretical pI: Translated: 12.02; Mature: 12.02

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
1.1 %Met     (Translated Protein)
1.1 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
1.1 %Met     (Mature Protein)
1.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKPAELRALTDDQLRQKLDELRNQVRDLRFAAALGQLKDTAAIRKARKDIARILTILSER
CCCHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
ERARLAEQGLLPPPKLTRRERRKRREQLAQQQRKG
HHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHCC
>Mature Secondary Structure
MKPAELRALTDDQLRQKLDELRNQVRDLRFAAALGQLKDTAAIRKARKDIARILTILSER
CCCHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
ERARLAEQGLLPPPKLTRRERRKRREQLAQQQRKG
HHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA