| Definition | Thermomicrobium roseum DSM 5159 chromosome, complete genome. |
|---|---|
| Accession | NC_011959 |
| Length | 2,003,006 |
Click here to switch to the map view.
The map label for this gene is ahcY [H]
Identifier: 221632916
GI number: 221632916
Start: 898761
End: 900029
Strand: Reverse
Name: ahcY [H]
Synonym: trd_0918
Alternate gene names: 221632916
Gene position: 900029-898761 (Counterclockwise)
Preceding gene: 221632917
Following gene: 221632915
Centisome position: 44.93
GC content: 60.68
Gene sequence:
>1269_bases GTGAACGGTCGAGTGATACCGTACGATATCGCTGATCTCACTTTAGCTGAGCAAGGAAGGAAGCGCATTGCTTGGGCAGC GCGGGAGATGCCCGTTTTGCGCCTCCTTCGTGAACGATTCGAACGAGAACGTCCGCTCGAGGGCCTGAGAATCGTTGCCT GTGTCCATGTCACGACCGAGACGGCGAATCTCGCTTACGCGTTGCGTGCTGCTGGTGCAACACCGGTGATCTGCGCGAGC AACCCGCTCTCGACGCAGGATGATGTCGCTGCCGCATTGGTTGCCGACGGCTTTCATGTCTACGCCCGGCGTGGTGAGGA CGCCGAGACGTACTACCGACACATCAACTGGGCTCTCGATCACGAGCCCCATCTGATCATCGATGATGGAGCGGACGTGG TCACGACCGTACACCGCGACCGACGCGATGTCCTCCAGACCGTGATCGGTTCGACCGAAGAGACGACAACTGGCGTCATC CGACTGCGTGCGTTGGCTCGCGATGATTTGCTGGCATTTCCGGCGATCGCTGTCAACGATGCCATGACGAAGCATTTGTT CGACAACCGATACGGCACAGGGCAAAGCACGATCGACGCCATCCTGCGCGCGACGAACCTGTTGCTAGCTGGCAAAACGG TGGTCGTCGCGGGGTATGGCTGGTGTGGGCGCGGTATCGCGCTCCGCGCACGGGGCATGGGTGCGCACGTGATCGTGACG GAGGTCGATCCGGTGCGAGCGCTCGAGGCCGTCATGGATGGGTATCGGGTGCTGCCGATGCGGGAAGCGGCACGGGTAGG AGACCTTTTCGTGACGGCTACTGGTAATCTGCACGTGATCGACCGAGAACACTTTCTCGTGATGAAGAACGGGGCGATCG TCTGCAATGCGGGGCACTTCAACGTCGAAATCAATCTCGAAGCACTGGCCGAAATGGCAGTCGAGCGCATTGTGCACCGG CCCTTTGTCGAGGAATACGTTCTGCCCGATGGGCGCGCGATCGTCGTCCTCGCCGAGGGGCGCCTCGTGAATCTCGCGGT TGCCGAGGGGCATCCGGCCAGTGTCATGGACATGAGCTTTGCTAACCAGGCGCTCGCCTGCGTGTACCTCGCGCAGCGGG GACGGCAACTCCCGGCTGATGTCTATCCGGTTCCGGCGGAAATCGATCGCGAAATTGCGCAGCTCAAGCTCGAGAGTATG GGCATTGCGATCGACCGGTTGACACCGGAACAAGAGGCCTATCTCGTCTCCTGGCAGCATGGGACATGA
Upstream 100 bases:
>100_bases GTATCATTCCGGCGCCCGATAGGCGAAAGATCGCGAACTTTCTTGCGGCGAACGGTCGAGGAACATCGGTCGAGCCAGGG GAAACGGGACGGGACGAACG
Downstream 100 bases:
>100_bases CGGCGACGTGCGGTACACGAGGTGTGACGTGACGAAGCGAAGGGGTTGGGAACGGTGACACTGAGCATCATGCGTGCCTC ACGCACGTACTTTACCTCGG
Product: adenosylhomocysteinase
Products: NA
Alternate protein names: S-adenosyl-L-homocysteine hydrolase; AdoHcyase [H]
Number of amino acids: Translated: 422; Mature: 422
Protein sequence:
>422_residues MNGRVIPYDIADLTLAEQGRKRIAWAAREMPVLRLLRERFERERPLEGLRIVACVHVTTETANLAYALRAAGATPVICAS NPLSTQDDVAAALVADGFHVYARRGEDAETYYRHINWALDHEPHLIIDDGADVVTTVHRDRRDVLQTVIGSTEETTTGVI RLRALARDDLLAFPAIAVNDAMTKHLFDNRYGTGQSTIDAILRATNLLLAGKTVVVAGYGWCGRGIALRARGMGAHVIVT EVDPVRALEAVMDGYRVLPMREAARVGDLFVTATGNLHVIDREHFLVMKNGAIVCNAGHFNVEINLEALAEMAVERIVHR PFVEEYVLPDGRAIVVLAEGRLVNLAVAEGHPASVMDMSFANQALACVYLAQRGRQLPADVYPVPAEIDREIAQLKLESM GIAIDRLTPEQEAYLVSWQHGT
Sequences:
>Translated_422_residues MNGRVIPYDIADLTLAEQGRKRIAWAAREMPVLRLLRERFERERPLEGLRIVACVHVTTETANLAYALRAAGATPVICAS NPLSTQDDVAAALVADGFHVYARRGEDAETYYRHINWALDHEPHLIIDDGADVVTTVHRDRRDVLQTVIGSTEETTTGVI RLRALARDDLLAFPAIAVNDAMTKHLFDNRYGTGQSTIDAILRATNLLLAGKTVVVAGYGWCGRGIALRARGMGAHVIVT EVDPVRALEAVMDGYRVLPMREAARVGDLFVTATGNLHVIDREHFLVMKNGAIVCNAGHFNVEINLEALAEMAVERIVHR PFVEEYVLPDGRAIVVLAEGRLVNLAVAEGHPASVMDMSFANQALACVYLAQRGRQLPADVYPVPAEIDREIAQLKLESM GIAIDRLTPEQEAYLVSWQHGT >Mature_422_residues MNGRVIPYDIADLTLAEQGRKRIAWAAREMPVLRLLRERFERERPLEGLRIVACVHVTTETANLAYALRAAGATPVICAS NPLSTQDDVAAALVADGFHVYARRGEDAETYYRHINWALDHEPHLIIDDGADVVTTVHRDRRDVLQTVIGSTEETTTGVI RLRALARDDLLAFPAIAVNDAMTKHLFDNRYGTGQSTIDAILRATNLLLAGKTVVVAGYGWCGRGIALRARGMGAHVIVT EVDPVRALEAVMDGYRVLPMREAARVGDLFVTATGNLHVIDREHFLVMKNGAIVCNAGHFNVEINLEALAEMAVERIVHR PFVEEYVLPDGRAIVVLAEGRLVNLAVAEGHPASVMDMSFANQALACVYLAQRGRQLPADVYPVPAEIDREIAQLKLESM GIAIDRLTPEQEAYLVSWQHGT
Specific function: May play a key role in the regulation of the intracellular concentration of adenosylhomocysteine [H]
COG id: COG0499
COG function: function code H; S-adenosylhomocysteine hydrolase
Gene ontology:
Cell location: Cytoplasm [H]
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the adenosylhomocysteinase family [H]
Homologues:
Organism=Homo sapiens, GI9951915, Length=413, Percent_Identity=45.0363196125908, Blast_Score=341, Evalue=9e-94, Organism=Homo sapiens, GI239937451, Length=389, Percent_Identity=44.987146529563, Blast_Score=320, Evalue=1e-87, Organism=Homo sapiens, GI298286489, Length=419, Percent_Identity=40.0954653937947, Blast_Score=302, Evalue=3e-82, Organism=Homo sapiens, GI195539349, Length=419, Percent_Identity=40.0954653937947, Blast_Score=302, Evalue=4e-82, Organism=Homo sapiens, GI195539337, Length=419, Percent_Identity=40.0954653937947, Blast_Score=301, Evalue=6e-82, Organism=Homo sapiens, GI24308043, Length=419, Percent_Identity=40.0954653937947, Blast_Score=301, Evalue=8e-82, Organism=Homo sapiens, GI21361647, Length=419, Percent_Identity=39.618138424821, Blast_Score=278, Evalue=7e-75, Organism=Caenorhabditis elegans, GI17506425, Length=416, Percent_Identity=43.5096153846154, Blast_Score=324, Evalue=6e-89, Organism=Saccharomyces cerevisiae, GI6320882, Length=427, Percent_Identity=42.8571428571429, Blast_Score=323, Evalue=3e-89, Organism=Drosophila melanogaster, GI24642172, Length=418, Percent_Identity=44.0191387559809, Blast_Score=335, Evalue=4e-92, Organism=Drosophila melanogaster, GI24656245, Length=404, Percent_Identity=39.6039603960396, Blast_Score=281, Evalue=5e-76, Organism=Drosophila melanogaster, GI45553387, Length=417, Percent_Identity=39.8081534772182, Blast_Score=275, Evalue=6e-74, Organism=Drosophila melanogaster, GI45553385, Length=417, Percent_Identity=39.8081534772182, Blast_Score=274, Evalue=9e-74,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR000043 - InterPro: IPR015878 - InterPro: IPR020082 [H]
Pfam domain/function: PF05221 AdoHcyase; PF00670 AdoHcyase_NAD [H]
EC number: =3.3.1.1 [H]
Molecular weight: Translated: 46401; Mature: 46401
Theoretical pI: Translated: 5.88; Mature: 5.88
Prosite motif: PS00738 ADOHCYASE_1 ; PS00739 ADOHCYASE_2
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.2 %Cys (Translated Protein) 2.6 %Met (Translated Protein) 3.8 %Cys+Met (Translated Protein) 1.2 %Cys (Mature Protein) 2.6 %Met (Mature Protein) 3.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MNGRVIPYDIADLTLAEQGRKRIAWAAREMPVLRLLRERFERERPLEGLRIVACVHVTTE CCCCEEEECHHHHHHHHHCCHHHHHHHHCCHHHHHHHHHHHHCCCCCCEEEEEEEEEEEC TANLAYALRAAGATPVICASNPLSTQDDVAAALVADGFHVYARRGEDAETYYRHINWALD CCHHEEEEECCCCCEEEECCCCCCCCHHHHHHHHHCCEEEEEECCCCHHHHHHHHCEEEC HEPHLIIDDGADVVTTVHRDRRDVLQTVIGSTEETTTGVIRLRALARDDLLAFPAIAVND CCCEEEEECCCCEEHHHHHHHHHHHHHHHCCCCCCHHHHEEEEEHHCCCHHCCCCHHHHH AMTKHLFDNRYGTGQSTIDAILRATNLLLAGKTVVVAGYGWCGRGIALRARGMGAHVIVT HHHHHHHCCCCCCCHHHHHHHHHHHHHEEECCEEEEEECCCCCCCEEEEECCCCCEEEEE EVDPVRALEAVMDGYRVLPMREAARVGDLFVTATGNLHVIDREHFLVMKNGAIVCNAGHF CCCHHHHHHHHHCCEEEEECHHHHCCCCEEEEECCCEEEEECCEEEEEECCEEEEECCEE NVEINLEALAEMAVERIVHRPFVEEYVLPDGRAIVVLAEGRLVNLAVAEGHPASVMDMSF EEEEEHHHHHHHHHHHHHHCCCHHHHCCCCCCEEEEEECCCEEEEEEECCCCCCEEEHHH ANQALACVYLAQRGRQLPADVYPVPAEIDREIAQLKLESMGIAIDRLTPEQEAYLVSWQH HHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHHCCEEEECCCCCCCEEEEEEEC GT CC >Mature Secondary Structure MNGRVIPYDIADLTLAEQGRKRIAWAAREMPVLRLLRERFERERPLEGLRIVACVHVTTE CCCCEEEECHHHHHHHHHCCHHHHHHHHCCHHHHHHHHHHHHCCCCCCEEEEEEEEEEEC TANLAYALRAAGATPVICASNPLSTQDDVAAALVADGFHVYARRGEDAETYYRHINWALD CCHHEEEEECCCCCEEEECCCCCCCCHHHHHHHHHCCEEEEEECCCCHHHHHHHHCEEEC HEPHLIIDDGADVVTTVHRDRRDVLQTVIGSTEETTTGVIRLRALARDDLLAFPAIAVND CCCEEEEECCCCEEHHHHHHHHHHHHHHHCCCCCCHHHHEEEEEHHCCCHHCCCCHHHHH AMTKHLFDNRYGTGQSTIDAILRATNLLLAGKTVVVAGYGWCGRGIALRARGMGAHVIVT HHHHHHHCCCCCCCHHHHHHHHHHHHHEEECCEEEEEECCCCCCCEEEEECCCCCEEEEE EVDPVRALEAVMDGYRVLPMREAARVGDLFVTATGNLHVIDREHFLVMKNGAIVCNAGHF CCCHHHHHHHHHCCEEEEECHHHHCCCCEEEEECCCEEEEECCEEEEEECCEEEEECCEE NVEINLEALAEMAVERIVHRPFVEEYVLPDGRAIVVLAEGRLVNLAVAEGHPASVMDMSF EEEEEHHHHHHHHHHHHHHCCCHHHHCCCCCCEEEEEECCCEEEEEEECCCCCCEEEHHH ANQALACVYLAQRGRQLPADVYPVPAEIDREIAQLKLESMGIAIDRLTPEQEAYLVSWQH HHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHHCCEEEECCCCCCCEEEEEEEC GT CC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 12240834 [H]