| Definition | Thermomicrobium roseum DSM 5159 chromosome, complete genome. |
|---|---|
| Accession | NC_011959 |
| Length | 2,003,006 |
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The map label for this gene is yggX [C]
Identifier: 221632912
GI number: 221632912
Start: 895243
End: 895551
Strand: Reverse
Name: yggX [C]
Synonym: trd_0914
Alternate gene names: 221632912
Gene position: 895551-895243 (Counterclockwise)
Preceding gene: 221632914
Following gene: 221632908
Centisome position: 44.71
GC content: 59.87
Gene sequence:
>309_bases ATGGCGCGACTGGTGCACTGCGTGAAGTTGCGGCGAGAGTTGCCCGGACTGGATCGTCCACCATTTCCTGGGCCGCTCGG TGAGCGCATTTATCGCGAGATCTCGCGCGATGCCTGGCAGATGTGGCTGGAATATCAGACGATCGTCATCAATCACTATG GGTTGAATCCGGCTGATCCGGATGATCGAGCGATCCTGCGTGCGCACCTGGAAGCCTTCCTGTTCGGAAGCGAGGAGGAG TTGCCTGAGGAGTGGATACCGCCGGGAGCAGGACAGCCAGCGAAGGGTGCTCCAGCTCGCAAGAAGTGA
Upstream 100 bases:
>100_bases GAGTGTCAGTTCCCACTTGCTGACAGGCTTTGACTTCATGGGTAACTGTCCGCTACGCTTGGGCAAGCGTTCGAGACCGA CGGGCGAGAGGAACAACGTC
Downstream 100 bases:
>100_bases TGCACCTCTCATGTGGTGAACACTCCGAGCACTGGCAGTTCGGGTGCAAGCCGGATCCGCAAGCGTGCGTGCGCGAGGCG CAATGCCGTTTCGACTTCTG
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 102; Mature: 101
Protein sequence:
>102_residues MARLVHCVKLRRELPGLDRPPFPGPLGERIYREISRDAWQMWLEYQTIVINHYGLNPADPDDRAILRAHLEAFLFGSEEE LPEEWIPPGAGQPAKGAPARKK
Sequences:
>Translated_102_residues MARLVHCVKLRRELPGLDRPPFPGPLGERIYREISRDAWQMWLEYQTIVINHYGLNPADPDDRAILRAHLEAFLFGSEEE LPEEWIPPGAGQPAKGAPARKK >Mature_101_residues ARLVHCVKLRRELPGLDRPPFPGPLGERIYREISRDAWQMWLEYQTIVINHYGLNPADPDDRAILRAHLEAFLFGSEEEL PEEWIPPGAGQPAKGAPARKK
Specific function: Could be a mediator in iron transactions between iron acquisition and iron-requiring processes, such as synthesis and/or repair of Fe-S clusters in biosynthetic enzymes [H]
COG id: COG2924
COG function: function code CO; Fe-S cluster protector protein
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the Fe(2+)-trafficking protein family [H]
Homologues:
Organism=Escherichia coli, GI1789332, Length=87, Percent_Identity=40.2298850574713, Blast_Score=74, Evalue=2e-15,
Paralogues:
None
Copy number: 200 Molecules/Cell In: Early Stationary Phase, Rich Media (Based on E. coli). [C]
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR007457 - ProDom: PD029191 [H]
Pfam domain/function: PF04362 Iron_traffic [H]
EC number: NA
Molecular weight: Translated: 11668; Mature: 11536
Theoretical pI: Translated: 6.79; Mature: 6.79
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.0 %Cys (Translated Protein) 2.0 %Met (Translated Protein) 2.9 %Cys+Met (Translated Protein) 1.0 %Cys (Mature Protein) 1.0 %Met (Mature Protein) 2.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MARLVHCVKLRRELPGLDRPPFPGPLGERIYREISRDAWQMWLEYQTIVINHYGLNPADP CHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHEEECCCCCCCCC DDRAILRAHLEAFLFGSEEELPEEWIPPGAGQPAKGAPARKK CHHHHHHHHHHHHHCCCHHHCCHHCCCCCCCCCCCCCCCCCC >Mature Secondary Structure ARLVHCVKLRRELPGLDRPPFPGPLGERIYREISRDAWQMWLEYQTIVINHYGLNPADP HHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHEEECCCCCCCCC DDRAILRAHLEAFLFGSEEELPEEWIPPGAGQPAKGAPARKK CHHHHHHHHHHHHHCCCHHHCCHHCCCCCCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA