Definition Thermomicrobium roseum DSM 5159 chromosome, complete genome.
Accession NC_011959
Length 2,003,006

Click here to switch to the map view.

The map label for this gene is 221632741

Identifier: 221632741

GI number: 221632741

Start: 722717

End: 723121

Strand: Reverse

Name: 221632741

Synonym: trd_0732

Alternate gene names: NA

Gene position: 723121-722717 (Counterclockwise)

Preceding gene: 221632743

Following gene: 221632735

Centisome position: 36.1

GC content: 60.99

Gene sequence:

>405_bases
GTGACCGCGATACCGGTAGCGGTCGACCGGCTCGCTCCAAAGATTTCAGAAAGAAAGGGTCGCTGGCCGATGGATACGCT
CACTGCAGAATGGTTGCGGGCGTTCCTGATCTGGCTCCCAGCCGGAACGCTCGGTCCCTATATCGTGAGTCGCTGGCGCG
GCGCCGATCCTCGTTTAGCCATCATCGAAGCGGGGATCTTCGCTTTGAGTGGCCTACTACTCTATCCGACTTTGCTCGGT
CTCCTGAGCGCCCGATTCATCGACTGGCAACGCGGCACGGTCCCAGTCGAAAGCCTATTCGTCGCTGGCTTTTTCCTAGC
CGGACTGACCATCGTGCTCATGCGACGCGCAACGCACCGTCTCCAACGTGGCTCCAGCACGCGCCGCTGGACCACGTTCC
GCTGA

Upstream 100 bases:

>100_bases
CCTCCAACGGGAATCGCTGCCGTGGATCCATTACCTCCCACGAGCGACGTACCTGGACAGCACAGCAGCCCCCTCGGTAC
GCTCGAAAAGGAGGCGACCA

Downstream 100 bases:

>100_bases
GAGCTGGTATTCGGATCAGCGTGGAACCAGTCAGTGCGCCTCAGAGGCGCTGGTAATCTTCGAGGGGGATCACGAAAACA
GTCGCCGCAGCACTCTCGAC

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 134; Mature: 133

Protein sequence:

>134_residues
MTAIPVAVDRLAPKISERKGRWPMDTLTAEWLRAFLIWLPAGTLGPYIVSRWRGADPRLAIIEAGIFALSGLLLYPTLLG
LLSARFIDWQRGTVPVESLFVAGFFLAGLTIVLMRRATHRLQRGSSTRRWTTFR

Sequences:

>Translated_134_residues
MTAIPVAVDRLAPKISERKGRWPMDTLTAEWLRAFLIWLPAGTLGPYIVSRWRGADPRLAIIEAGIFALSGLLLYPTLLG
LLSARFIDWQRGTVPVESLFVAGFFLAGLTIVLMRRATHRLQRGSSTRRWTTFR
>Mature_133_residues
TAIPVAVDRLAPKISERKGRWPMDTLTAEWLRAFLIWLPAGTLGPYIVSRWRGADPRLAIIEAGIFALSGLLLYPTLLGL
LSARFIDWQRGTVPVESLFVAGFFLAGLTIVLMRRATHRLQRGSSTRRWTTFR

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 15108; Mature: 14977

Theoretical pI: Translated: 12.17; Mature: 12.17

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
2.2 %Met     (Translated Protein)
2.2 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
1.5 %Met     (Mature Protein)
1.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTAIPVAVDRLAPKISERKGRWPMDTLTAEWLRAFLIWLPAGTLGPYIVSRWRGADPRLA
CCCCHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHCCCCHHHHHHHHCCCCCCCHH
IIEAGIFALSGLLLYPTLLGLLSARFIDWQRGTVPVESLFVAGFFLAGLTIVLMRRATHR
HHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHH
LQRGSSTRRWTTFR
HHCCCCCCCCCCCC
>Mature Secondary Structure 
TAIPVAVDRLAPKISERKGRWPMDTLTAEWLRAFLIWLPAGTLGPYIVSRWRGADPRLA
CCCHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHCCCCHHHHHHHHCCCCCCCHH
IIEAGIFALSGLLLYPTLLGLLSARFIDWQRGTVPVESLFVAGFFLAGLTIVLMRRATHR
HHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHH
LQRGSSTRRWTTFR
HHCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA