| Definition | Thermomicrobium roseum DSM 5159 chromosome, complete genome. |
|---|---|
| Accession | NC_011959 |
| Length | 2,003,006 |
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The map label for this gene is ybaL [H]
Identifier: 221632733
GI number: 221632733
Start: 715431
End: 717155
Strand: Reverse
Name: ybaL [H]
Synonym: trd_0723
Alternate gene names: 221632733
Gene position: 717155-715431 (Counterclockwise)
Preceding gene: 221632734
Following gene: 221632732
Centisome position: 35.8
GC content: 61.91
Gene sequence:
>1725_bases GTGGAACGCGAAGCCATTTTTCTCGTCTTCTTGATCGTCGTCGCCGCAGCCGTCCTGCTCGGTCTGGTGTCCGCCCGGCT GCGGCAACCGGTCATCATGGGTTACCTCGTCGCTGGGCTCTTGCTCGGTCGCCTCTTGGAGGGTCGGCACATCGATCCCG CGATCATTCAAGCTTTCGCTGATTTCGGTGTGAGCTTTCTCATGTTCTCGCTCGGCGTCCACTTCTCCTTTCGGGAGCTG ATCGAGTTACGCCGTATCGTCATTCGTGGGGGACTCCTCCAGATCGGCCTGACGCTCATGGTTGCATTCCTCATCTTTCG CGCATTGGGCCTCACCACCGCACAAGCGTTCGTGCTCGCTGAACTCTCAGCGATCTCCAGTTCGGTGATCGGTTTCACGC TCATGGAACTGCGGGGCACCTTGAACCAACCAGCCGCACGCCCGACCGCAGCGATCCTGCTCGCCCAAGATATCGCGGTG GTGCCGTTGGTCGCGATCATTCCCGCGCTCGTCGGTTCCGACCTCGTGGACGTCGTTCTCGGCCTCGGAAAATCGATCGC GCTCGCCGTCGTCGCGTTGCTGACGATCGCGGTCCTCGGCATACGCATCGTCCCTTGGTTACTGTTTCAGATCGCACGAG TCGGAAGCCGGGAACTTTTCCTTCTAGCGGTCGTCCTGCTAGCGATCGGAACAGCAGTGGGGAGCGAATGGGCCGGCCTC TCGTTCGCTCTGGGGGCTTTTCTGGCTGGTATCGTCGTATCCGAATCCGAGTTTTCCTATCAAGTTCTCGGCGGTATTCT CCCGCTTCGTGATGTCTTCGGCGTCATGTTCTTCGCCGCACTCGGCCTTCTCGCGGACCCGATTGCTCTCCTCCGGTCCT GGCCGATTGCGCTCGCCATCTTGATCGTCGTAACCGTGATCAAAGGGTTCCTTGCCGCAGGTGTAGTCGCGTTCTTGGGT TACTCACCGAGCGTCGCTATTCGCTCGGGAGCCTTTCTCGCGCAGATCGGCGAATTCTCGTTCGTGCTCGGTCTACTCGG GTTGCAGGTGGGTATTCTCGACCACACTCTCTACAATGCGATGATCGGTGCTGCGATCGCCTCGCTCCTGCTCAATACCT TTCTCTTGACGCTGACGGAGCGGGCCCGTTGGCTGCTCGAGCCGCCGCTCCGCTTGGTCGGTCGCCCGGCAGCGCTCCAC GAGATCGATTCCGGTGCTTCCTCGAGTTCGCCCCTGCGCGGTCATGTCGTGATCGCTGGTTACGGTCGCTCTGGCCGCGA AGTGGGGCGAGTCCTGCAACGCCGGCGCTTTCGTTTCGTCGTGATCGATCGCGATCCCGTCCTGGTGCGCGACTTGCGGC GCCTGGGGATCCAGGCGATCTATGGTGACGTCGCGAACGAGCAGGTCCTCCTGGCGGCGCACATCACGACCGCGCGCGTC TTCGTCGTCGCTGTCCCCGATGCCTTTGCCGCCGAAGCTGCGGTGCGCCTGGCCCGGACACTCAACCCCACCCTGGACAT CATCGCGCGGGCCGACCGGCGAGCCTTCGTCGCGCGCTTGGTCGAGGCTGGGGCCACCGAAGTGGTGCACCCTAGTTTCG AAGCTGGCCTGGAAATGGTTCGTCACACCTTACACCGCTTCGGGATGAGCATGCAAGAGATCCAGGCCATCGTGGCAGCG CGCCGGATCGACTATTACGAGGAACAGGGGCATCTGACCGAGTGA
Upstream 100 bases:
>100_bases GCCTCGACGCAAAACTGTAGTACGATGCCGTTTTGCGCACTCGCGCTGAGGCGCGCTGACGATTTGATCGCCTGCTCGGG AGAGTGAACAGGCAAAACGC
Downstream 100 bases:
>100_bases GCGACCAACGACCACGTGCCTGCCTCGTCGAGCACCACGACAATCGGCTCCGCTCGCGGTGCTTAGCCAGATCGCTCTCG AGCAAGACCGCCAGTTCTCG
Product: putative glutathione-regulated potassium-efflux system protein KefB
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 574; Mature: 574
Protein sequence:
>574_residues MEREAIFLVFLIVVAAAVLLGLVSARLRQPVIMGYLVAGLLLGRLLEGRHIDPAIIQAFADFGVSFLMFSLGVHFSFREL IELRRIVIRGGLLQIGLTLMVAFLIFRALGLTTAQAFVLAELSAISSSVIGFTLMELRGTLNQPAARPTAAILLAQDIAV VPLVAIIPALVGSDLVDVVLGLGKSIALAVVALLTIAVLGIRIVPWLLFQIARVGSRELFLLAVVLLAIGTAVGSEWAGL SFALGAFLAGIVVSESEFSYQVLGGILPLRDVFGVMFFAALGLLADPIALLRSWPIALAILIVVTVIKGFLAAGVVAFLG YSPSVAIRSGAFLAQIGEFSFVLGLLGLQVGILDHTLYNAMIGAAIASLLLNTFLLTLTERARWLLEPPLRLVGRPAALH EIDSGASSSSPLRGHVVIAGYGRSGREVGRVLQRRRFRFVVIDRDPVLVRDLRRLGIQAIYGDVANEQVLLAAHITTARV FVVAVPDAFAAEAAVRLARTLNPTLDIIARADRRAFVARLVEAGATEVVHPSFEAGLEMVRHTLHRFGMSMQEIQAIVAA RRIDYYEEQGHLTE
Sequences:
>Translated_574_residues MEREAIFLVFLIVVAAAVLLGLVSARLRQPVIMGYLVAGLLLGRLLEGRHIDPAIIQAFADFGVSFLMFSLGVHFSFREL IELRRIVIRGGLLQIGLTLMVAFLIFRALGLTTAQAFVLAELSAISSSVIGFTLMELRGTLNQPAARPTAAILLAQDIAV VPLVAIIPALVGSDLVDVVLGLGKSIALAVVALLTIAVLGIRIVPWLLFQIARVGSRELFLLAVVLLAIGTAVGSEWAGL SFALGAFLAGIVVSESEFSYQVLGGILPLRDVFGVMFFAALGLLADPIALLRSWPIALAILIVVTVIKGFLAAGVVAFLG YSPSVAIRSGAFLAQIGEFSFVLGLLGLQVGILDHTLYNAMIGAAIASLLLNTFLLTLTERARWLLEPPLRLVGRPAALH EIDSGASSSSPLRGHVVIAGYGRSGREVGRVLQRRRFRFVVIDRDPVLVRDLRRLGIQAIYGDVANEQVLLAAHITTARV FVVAVPDAFAAEAAVRLARTLNPTLDIIARADRRAFVARLVEAGATEVVHPSFEAGLEMVRHTLHRFGMSMQEIQAIVAA RRIDYYEEQGHLTE >Mature_574_residues MEREAIFLVFLIVVAAAVLLGLVSARLRQPVIMGYLVAGLLLGRLLEGRHIDPAIIQAFADFGVSFLMFSLGVHFSFREL IELRRIVIRGGLLQIGLTLMVAFLIFRALGLTTAQAFVLAELSAISSSVIGFTLMELRGTLNQPAARPTAAILLAQDIAV VPLVAIIPALVGSDLVDVVLGLGKSIALAVVALLTIAVLGIRIVPWLLFQIARVGSRELFLLAVVLLAIGTAVGSEWAGL SFALGAFLAGIVVSESEFSYQVLGGILPLRDVFGVMFFAALGLLADPIALLRSWPIALAILIVVTVIKGFLAAGVVAFLG YSPSVAIRSGAFLAQIGEFSFVLGLLGLQVGILDHTLYNAMIGAAIASLLLNTFLLTLTERARWLLEPPLRLVGRPAALH EIDSGASSSSPLRGHVVIAGYGRSGREVGRVLQRRRFRFVVIDRDPVLVRDLRRLGIQAIYGDVANEQVLLAAHITTARV FVVAVPDAFAAEAAVRLARTLNPTLDIIARADRRAFVARLVEAGATEVVHPSFEAGLEMVRHTLHRFGMSMQEIQAIVAA RRIDYYEEQGHLTE
Specific function: Unknown
COG id: COG0475
COG function: function code P; Kef-type K+ transport systems, membrane components
Gene ontology:
Cell location: Cell inner membrane; Multi-pass membrane protein [H]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 1 RCK N-terminal domain [H]
Homologues:
Organism=Homo sapiens, GI157388921, Length=351, Percent_Identity=25.9259259259259, Blast_Score=89, Evalue=2e-17, Organism=Escherichia coli, GI1786685, Length=524, Percent_Identity=33.206106870229, Blast_Score=249, Evalue=2e-67, Organism=Escherichia coli, GI1786232, Length=550, Percent_Identity=30.9090909090909, Blast_Score=165, Evalue=6e-42, Organism=Escherichia coli, GI1789749, Length=558, Percent_Identity=27.5985663082437, Blast_Score=159, Evalue=6e-40,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR006153 - InterPro: IPR004771 - InterPro: IPR016040 - InterPro: IPR003148 [H]
Pfam domain/function: PF00999 Na_H_Exchanger; PF02254 TrkA_N [H]
EC number: NA
Molecular weight: Translated: 61622; Mature: 61622
Theoretical pI: Translated: 9.83; Mature: 9.83
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 1.7 %Met (Translated Protein) 1.7 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 1.7 %Met (Mature Protein) 1.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MEREAIFLVFLIVVAAAVLLGLVSARLRQPVIMGYLVAGLLLGRLLEGRHIDPAIIQAFA CCCHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHH DFGVSFLMFSLGVHFSFRELIELRRIVIRGGLLQIGLTLMVAFLIFRALGLTTAQAFVLA HHHHHHHHHHHCCCCCHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH ELSAISSSVIGFTLMELRGTLNQPAARPTAAILLAQDIAVVPLVAIIPALVGSDLVDVVL HHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHH GLGKSIALAVVALLTIAVLGIRIVPWLLFQIARVGSRELFLLAVVLLAIGTAVGSEWAGL HCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHCCCCCHH SFALGAFLAGIVVSESEFSYQVLGGILPLRDVFGVMFFAALGLLADPIALLRSWPIALAI HHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH LIVVTVIKGFLAAGVVAFLGYSPSVAIRSGAFLAQIGEFSFVLGLLGLQVGILDHTLYNA HHHHHHHHHHHHHHHHHHHCCCCCHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH MIGAAIASLLLNTFLLTLTERARWLLEPPLRLVGRPAALHEIDSGASSSSPLRGHVVIAG HHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHCCCHHHHHHCCCCCCCCCCCEEEEEEE YGRSGREVGRVLQRRRFRFVVIDRDPVLVRDLRRLGIQAIYGDVANEQVLLAAHITTARV CCCCHHHHHHHHHHCCCEEEEECCCCHHHHHHHHHHHHHHHHCCCCCCEEEEEEHHHHEE FVVAVPDAFAAEAAVRLARTLNPTLDIIARADRRAFVARLVEAGATEVVHPSFEAGLEMV EEEECCCHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHCCCCHHCCCCHHHHHHHH RHTLHRFGMSMQEIQAIVAARRIDYYEEQGHLTE HHHHHHHCCCHHHHHHHHHHHHHHHHHCCCCCCC >Mature Secondary Structure MEREAIFLVFLIVVAAAVLLGLVSARLRQPVIMGYLVAGLLLGRLLEGRHIDPAIIQAFA CCCHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHH DFGVSFLMFSLGVHFSFRELIELRRIVIRGGLLQIGLTLMVAFLIFRALGLTTAQAFVLA HHHHHHHHHHHCCCCCHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH ELSAISSSVIGFTLMELRGTLNQPAARPTAAILLAQDIAVVPLVAIIPALVGSDLVDVVL HHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHH GLGKSIALAVVALLTIAVLGIRIVPWLLFQIARVGSRELFLLAVVLLAIGTAVGSEWAGL HCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHCCCCCHH SFALGAFLAGIVVSESEFSYQVLGGILPLRDVFGVMFFAALGLLADPIALLRSWPIALAI HHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH LIVVTVIKGFLAAGVVAFLGYSPSVAIRSGAFLAQIGEFSFVLGLLGLQVGILDHTLYNA HHHHHHHHHHHHHHHHHHHCCCCCHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH MIGAAIASLLLNTFLLTLTERARWLLEPPLRLVGRPAALHEIDSGASSSSPLRGHVVIAG HHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHCCCHHHHHHCCCCCCCCCCCEEEEEEE YGRSGREVGRVLQRRRFRFVVIDRDPVLVRDLRRLGIQAIYGDVANEQVLLAAHITTARV CCCCHHHHHHHHHHCCCEEEEECCCCHHHHHHHHHHHHHHHHCCCCCCEEEEEEHHHHEE FVVAVPDAFAAEAAVRLARTLNPTLDIIARADRRAFVARLVEAGATEVVHPSFEAGLEMV EEEECCCHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHCCCCHHCCCCHHHHHHHH RHTLHRFGMSMQEIQAIVAARRIDYYEEQGHLTE HHHHHHHCCCHHHHHHHHHHHHHHHHHCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 6.0
TargetDB status: NA
Availability: NA
References: 9278503; 7721718 [H]