| Definition | Thermomicrobium roseum DSM 5159 chromosome, complete genome. |
|---|---|
| Accession | NC_011959 |
| Length | 2,003,006 |
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The map label for this gene is 221632478
Identifier: 221632478
GI number: 221632478
Start: 449544
End: 450359
Strand: Reverse
Name: 221632478
Synonym: trd_0451
Alternate gene names: NA
Gene position: 450359-449544 (Counterclockwise)
Preceding gene: 221632479
Following gene: 221632476
Centisome position: 22.48
GC content: 62.13
Gene sequence:
>816_bases GTGCGCATCATGGGCATCGATTTCAGTGCGGCACGCGACGCGAGTCGCAAAATCTGGCTCGCTTTTGGAAACGCTGTCAG TGACCAGCTCCACATCGAGACGCTCGCACCGCTCGAAACGCTCGCCGATCGGCCACTCGCGAACGCCTCTGCTGTCCTCG CCCGGATCATCGCTTCCAGTGGACCATCGATCATCGCCTGCGACGCCTGCTTTGGGCTCCCGGTACCCTCGAGCGCTGCC CCCTGGCACACTTGGCTACTCAGCTATCCCAGCCGTTTTGCGGACGCCGAGCAACTGCGGCAGGAGGGAAGGGATGCACA CGGGAGGGAACGAAAGCGTTTGACCGATCGCGTCGCTCGTGCTCCATTCGCGCCAACTAACCTGCGTATCTATCGGCAGA CGGACAGCTGGCTGCGCAGTGTCCTCCATCCCCTCGTCGCTGCTGACGCTGTCGCCGTTGCCCCCTTTGAACGATTGCGG GAAGACCGTCCGTGTCTTCTCGAAGTTTGTCCCAGCGTGTCCCTCCGCGAATTTGGTTTGCCCAATCTTCGGTATAAGGG CTCCGATCATCTCCGACGGCAGTGTCGATGCGACATCCTCACAGGACTCACTCGGCTCGGGCTCGATCTGCCAAGCTCCC TTGCGAGCCGTGCACTGGACGATCCGGGCGGCGATGCACTGGACGCCCTGATCGCTGCGATCACGGCGTGGCTGGTCGTG CGGCAAGATCTTCTCGCTTGCCCCCTGCCAGCAGAAGCCTTCATCGAAGGGTGGATCTACTACCCGATTCTCTCTTCCCC CACGAACGCGCGGTAG
Upstream 100 bases:
>100_bases CTTGTTCAGGCTACGCTGGCCCAGCAGCACCCGCCCGCTTTCGCTCGCCTGGCTGCTGCGCTCGATCGCGAACTGGAGGA CCGACTCGGAGAGTGACACC
Downstream 100 bases:
>100_bases ACTGCGCGCAACTGCTCGCCGATCCGGTCCCAGTCATACAGCTGCTCGACCAATCGACGAGCCGCCTCGGCCAGTGCCGC ACGCCGTTGCGATGAAGCGA
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 271; Mature: 271
Protein sequence:
>271_residues MRIMGIDFSAARDASRKIWLAFGNAVSDQLHIETLAPLETLADRPLANASAVLARIIASSGPSIIACDACFGLPVPSSAA PWHTWLLSYPSRFADAEQLRQEGRDAHGRERKRLTDRVARAPFAPTNLRIYRQTDSWLRSVLHPLVAADAVAVAPFERLR EDRPCLLEVCPSVSLREFGLPNLRYKGSDHLRRQCRCDILTGLTRLGLDLPSSLASRALDDPGGDALDALIAAITAWLVV RQDLLACPLPAEAFIEGWIYYPILSSPTNAR
Sequences:
>Translated_271_residues MRIMGIDFSAARDASRKIWLAFGNAVSDQLHIETLAPLETLADRPLANASAVLARIIASSGPSIIACDACFGLPVPSSAA PWHTWLLSYPSRFADAEQLRQEGRDAHGRERKRLTDRVARAPFAPTNLRIYRQTDSWLRSVLHPLVAADAVAVAPFERLR EDRPCLLEVCPSVSLREFGLPNLRYKGSDHLRRQCRCDILTGLTRLGLDLPSSLASRALDDPGGDALDALIAAITAWLVV RQDLLACPLPAEAFIEGWIYYPILSSPTNAR >Mature_271_residues MRIMGIDFSAARDASRKIWLAFGNAVSDQLHIETLAPLETLADRPLANASAVLARIIASSGPSIIACDACFGLPVPSSAA PWHTWLLSYPSRFADAEQLRQEGRDAHGRERKRLTDRVARAPFAPTNLRIYRQTDSWLRSVLHPLVAADAVAVAPFERLR EDRPCLLEVCPSVSLREFGLPNLRYKGSDHLRRQCRCDILTGLTRLGLDLPSSLASRALDDPGGDALDALIAAITAWLVV RQDLLACPLPAEAFIEGWIYYPILSSPTNAR
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 29801; Mature: 29801
Theoretical pI: Translated: 7.77; Mature: 7.77
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.6 %Cys (Translated Protein) 0.7 %Met (Translated Protein) 3.3 %Cys+Met (Translated Protein) 2.6 %Cys (Mature Protein) 0.7 %Met (Mature Protein) 3.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MRIMGIDFSAARDASRKIWLAFGNAVSDQLHIETLAPLETLADRPLANASAVLARIIASS CEEECCCHHHHCCCCCEEEEEECCCCCCCCHHHHHHHHHHHHCCCCCHHHHHHHHHHHCC GPSIIACDACFGLPVPSSAAPWHTWLLSYPSRFADAEQLRQEGRDAHGRERKRLTDRVAR CCCEEEECCCCCCCCCCCCCCHHHHHHHCCHHCCCHHHHHHHCCCCCHHHHHHHHHHHHH APFAPTNLRIYRQTDSWLRSVLHPLVAADAVAVAPFERLREDRPCLLEVCPSVSLREFGL CCCCCCCEEEEECHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHCCCCCHHHCCC PNLRYKGSDHLRRQCRCDILTGLTRLGLDLPSSLASRALDDPGGDALDALIAAITAWLVV CCCCCCCCHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHCCCCCCHHHHHHHHHHHHHHHH RQDLLACPLPAEAFIEGWIYYPILSSPTNAR HHHHHHCCCCHHHHHCCHHEEEEECCCCCCC >Mature Secondary Structure MRIMGIDFSAARDASRKIWLAFGNAVSDQLHIETLAPLETLADRPLANASAVLARIIASS CEEECCCHHHHCCCCCEEEEEECCCCCCCCHHHHHHHHHHHHCCCCCHHHHHHHHHHHCC GPSIIACDACFGLPVPSSAAPWHTWLLSYPSRFADAEQLRQEGRDAHGRERKRLTDRVAR CCCEEEECCCCCCCCCCCCCCHHHHHHHCCHHCCCHHHHHHHCCCCCHHHHHHHHHHHHH APFAPTNLRIYRQTDSWLRSVLHPLVAADAVAVAPFERLREDRPCLLEVCPSVSLREFGL CCCCCCCEEEEECHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHCCCCCHHHCCC PNLRYKGSDHLRRQCRCDILTGLTRLGLDLPSSLASRALDDPGGDALDALIAAITAWLVV CCCCCCCCHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHCCCCCCHHHHHHHHHHHHHHHH RQDLLACPLPAEAFIEGWIYYPILSSPTNAR HHHHHHCCCCHHHHHCCHHEEEEECCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA