Click here to switch to the map view.

The map label for this gene is ybaZ [H]

Identifier: 221632431

GI number: 221632431

Start: 401646

End: 402005

Strand: Reverse

Name: ybaZ [H]

Synonym: trd_0403

Alternate gene names: 221632431

Gene position: 402005-401646 (Counterclockwise)

Preceding gene: 221632432

Following gene: 221632425

Centisome position: 20.07

GC content: 65.28

Gene sequence:

>360_bases
ATGGGCACGGCAAAGAGAAGCCAGCAGTCATCACCGTTCGCCGAGCGGGTCTACGCCATCGTCCGGCGTATCCCGCCGGG
CCGCGTCACGACCTACGGGCGTATCGCTCGCGCAGCCGGGCTCACTCGATCAGCACGAATGGTCGGTTGGCTCCTTCACG
AGGCGCCAGCCGATGTCGCTGCAGTCGCGCACCGCGTGGTCAACCGGAACGGCGAGTTGACCGGCGGTTGGGCCTGGGGA
CACCCGAGCGTGATGCGGGCGCTCCTGGAAGAAGAAGGCGTGACGTTCGTCGACGAATACCGCGTCGATCTCGAACGACA
TCTCTGGGAACCCGAGGACGAGTTCTCCGAGAGATCCTGA

Upstream 100 bases:

>100_bases
GCTCGGCTCCTGCTCCACGAGCCGCTTCCACTTCGTGTCTGGTTCGGGGCGATCCTCATCGTCCTCGGTATCCTGTTCGT
GGGAGGACGGATCTGAGATC

Downstream 100 bases:

>100_bases
ACGGAGGCCAAACACGCCAAGGCCCCTCCCCCTGGCAGGAGCCCGTTGTTTGCTCAGCCGCCACCGACGAAATGCACCAC
CTCGATCACGTCGCCGTCGC

Product: putative 6-O-methylguanine DNA methyltransferase family protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 119; Mature: 118

Protein sequence:

>119_residues
MGTAKRSQQSSPFAERVYAIVRRIPPGRVTTYGRIARAAGLTRSARMVGWLLHEAPADVAAVAHRVVNRNGELTGGWAWG
HPSVMRALLEEEGVTFVDEYRVDLERHLWEPEDEFSERS

Sequences:

>Translated_119_residues
MGTAKRSQQSSPFAERVYAIVRRIPPGRVTTYGRIARAAGLTRSARMVGWLLHEAPADVAAVAHRVVNRNGELTGGWAWG
HPSVMRALLEEEGVTFVDEYRVDLERHLWEPEDEFSERS
>Mature_118_residues
GTAKRSQQSSPFAERVYAIVRRIPPGRVTTYGRIARAAGLTRSARMVGWLLHEAPADVAAVAHRVVNRNGELTGGWAWGH
PSVMRALLEEEGVTFVDEYRVDLERHLWEPEDEFSERS

Specific function: Unknown

COG id: COG3695

COG function: function code L; Predicted methylated DNA-protein cysteine methyltransferase

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the MGMT family [H]

Homologues:

Organism=Escherichia coli, GI1786659, Length=111, Percent_Identity=40.5405405405405, Blast_Score=65, Evalue=1e-12,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR014048
- InterPro:   IPR011991 [H]

Pfam domain/function: PF01035 DNA_binding_1 [H]

EC number: NA

Molecular weight: Translated: 13400; Mature: 13269

Theoretical pI: Translated: 7.85; Mature: 7.85

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
2.5 %Met     (Translated Protein)
2.5 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
1.7 %Met     (Mature Protein)
1.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MGTAKRSQQSSPFAERVYAIVRRIPPGRVTTYGRIARAAGLTRSARMVGWLLHEAPADVA
CCCCCCCCCCCCHHHHHHHHHHHCCCCCCCHHHHHHHHHCCCHHHHHHHHHHHHCCHHHH
AVAHRVVNRNGELTGGWAWGHPSVMRALLEEEGVTFVDEYRVDLERHLWEPEDEFSERS
HHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHCCCCHHHHHHHHHHHHCCCCCHHCCCCC
>Mature Secondary Structure 
GTAKRSQQSSPFAERVYAIVRRIPPGRVTTYGRIARAAGLTRSARMVGWLLHEAPADVA
CCCCCCCCCCCHHHHHHHHHHHCCCCCCCHHHHHHHHHCCCHHHHHHHHHHHHCCHHHH
AVAHRVVNRNGELTGGWAWGHPSVMRALLEEEGVTFVDEYRVDLERHLWEPEDEFSERS
HHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHCCCCHHHHHHHHHHHHCCCCCHHCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: DNA [C]

Specific reaction: Protein + DNA = Protein-DNA [C]

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9278503 [H]