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The map label for this gene is sufC [C]

Identifier: 221632409

GI number: 221632409

Start: 383566

End: 384393

Strand: Reverse

Name: sufC [C]

Synonym: trd_0381

Alternate gene names: 221632409

Gene position: 384393-383566 (Counterclockwise)

Preceding gene: 221632410

Following gene: 221632408

Centisome position: 19.19

GC content: 60.63

Gene sequence:

>828_bases
GTGACCGACGGAGTCGACGGAACGAAGGAGGGACGCAACAGCATGACCGAACACACGCCGCTTTTCGTGATCGAAAACCT
GCGCGCGGGCATCGAGGGGAAAGAGATCCTGCGCGGGGTCAACCTGGTGATCGAGCGGGGTGAGATTCACGCCTTGATGG
GACCCAACGGTTCCGGCAAGAGCACCCTGGCCTACGTGATCGCTGGGCATCCCAACTACGAGGTCTATGAAGGACGCATC
CTGTACAAGGGCGAAAATGTTCTCGAGCTCCCGCCCGACGAGCGCGCACGGATGGGCATGTTCCTGGCCTTCCAGTATCC
GACCGCTATCCCTGGCGTGACCATGGCCAACTTCCTGCGCTTGGCGGTCAATTCGGTGCGCAAGGCGCGTCTCGGTGAGG
ACAAGGCCCTCAGCCCCCGGGAGTTCCGTCGATTGCTCCGGGAAAAGCTCGAGATGCTCCGCATGGATGAGAGCTTCGCT
TCGCGCTACCTCAACGAGGGATTCTCGGGTGGCGAGAAGAAGCGAGCCGAAATCCTGCAGATGGCGATGCTCGAGCCGGA
GTTCGCCGTGCTGGACGAGACCGACTCTGGTCTCGACATCGACGCGCTGCGGACGGTCTCCGAAGGTGTGAACCGTCTCT
TCAACCCGAATATGGCCCTGTTGGTCATCACGCACTATCAGCGCATCTTGAACTACATCCGCCCACACTATGTGCACGTC
ATGCTGGACGGTAAGATCGCTGTCTCCGGTGGGCCGGAACTGGCTGAAGAACTCGAAGAGAAAGGGTACGACTGGGTCAA
GGAGCAGTTCGCGGAAGCGGCCTCCTGA

Upstream 100 bases:

>100_bases
GCAGGAAGCACGGGCTGGTCGGCGCTGAGCTGAACCGTGTTTGGCGGTGGAAGGGGGATGATGCAGATCGAGTTTCGAAA
CGACATGGTAGAGTAAATCG

Downstream 100 bases:

>100_bases
CCGAGCCGTACCATAAGGAGGAACGTGCCATGACGACACCAGAAGTCGAACTCAAGCGATTGGGAAGCGAGTACGCCGAA
AAGTACGGGTTCCGCGACCC

Product: FeS assembly ATPase SufC

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 275; Mature: 274

Protein sequence:

>275_residues
MTDGVDGTKEGRNSMTEHTPLFVIENLRAGIEGKEILRGVNLVIERGEIHALMGPNGSGKSTLAYVIAGHPNYEVYEGRI
LYKGENVLELPPDERARMGMFLAFQYPTAIPGVTMANFLRLAVNSVRKARLGEDKALSPREFRRLLREKLEMLRMDESFA
SRYLNEGFSGGEKKRAEILQMAMLEPEFAVLDETDSGLDIDALRTVSEGVNRLFNPNMALLVITHYQRILNYIRPHYVHV
MLDGKIAVSGGPELAEELEEKGYDWVKEQFAEAAS

Sequences:

>Translated_275_residues
MTDGVDGTKEGRNSMTEHTPLFVIENLRAGIEGKEILRGVNLVIERGEIHALMGPNGSGKSTLAYVIAGHPNYEVYEGRI
LYKGENVLELPPDERARMGMFLAFQYPTAIPGVTMANFLRLAVNSVRKARLGEDKALSPREFRRLLREKLEMLRMDESFA
SRYLNEGFSGGEKKRAEILQMAMLEPEFAVLDETDSGLDIDALRTVSEGVNRLFNPNMALLVITHYQRILNYIRPHYVHV
MLDGKIAVSGGPELAEELEEKGYDWVKEQFAEAAS
>Mature_274_residues
TDGVDGTKEGRNSMTEHTPLFVIENLRAGIEGKEILRGVNLVIERGEIHALMGPNGSGKSTLAYVIAGHPNYEVYEGRIL
YKGENVLELPPDERARMGMFLAFQYPTAIPGVTMANFLRLAVNSVRKARLGEDKALSPREFRRLLREKLEMLRMDESFAS
RYLNEGFSGGEKKRAEILQMAMLEPEFAVLDETDSGLDIDALRTVSEGVNRLFNPNMALLVITHYQRILNYIRPHYVHVM
LDGKIAVSGGPELAEELEEKGYDWVKEQFAEAAS

Specific function: Unknown

COG id: COG0396

COG function: function code O; ABC-type transport system involved in Fe-S cluster assembly, ATPase component

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 ABC transporter domain [H]

Homologues:

Organism=Escherichia coli, GI1787972, Length=249, Percent_Identity=51.4056224899598, Blast_Score=267, Evalue=5e-73,
Organism=Escherichia coli, GI1787370, Length=242, Percent_Identity=28.9256198347107, Blast_Score=79, Evalue=4e-16,
Organism=Escherichia coli, GI1787792, Length=239, Percent_Identity=25.1046025104602, Blast_Score=75, Evalue=6e-15,
Organism=Escherichia coli, GI1789672, Length=209, Percent_Identity=28.7081339712919, Blast_Score=74, Evalue=1e-14,
Organism=Escherichia coli, GI1786698, Length=235, Percent_Identity=27.2340425531915, Blast_Score=73, Evalue=2e-14,
Organism=Escherichia coli, GI87081791, Length=210, Percent_Identity=30.4761904761905, Blast_Score=70, Evalue=2e-13,
Organism=Escherichia coli, GI1789864, Length=240, Percent_Identity=27.5, Blast_Score=69, Evalue=3e-13,
Organism=Escherichia coli, GI1789593, Length=205, Percent_Identity=27.3170731707317, Blast_Score=65, Evalue=6e-12,
Organism=Escherichia coli, GI1790525, Length=223, Percent_Identity=29.1479820627803, Blast_Score=65, Evalue=7e-12,
Organism=Escherichia coli, GI1790162, Length=250, Percent_Identity=27.2, Blast_Score=64, Evalue=8e-12,
Organism=Escherichia coli, GI1787029, Length=221, Percent_Identity=27.1493212669683, Blast_Score=64, Evalue=1e-11,
Organism=Escherichia coli, GI1786319, Length=201, Percent_Identity=25.8706467661692, Blast_Score=62, Evalue=4e-11,
Organism=Escherichia coli, GI1787500, Length=202, Percent_Identity=27.7227722772277, Blast_Score=61, Evalue=7e-11,
Organism=Caenorhabditis elegans, GI17543740, Length=237, Percent_Identity=28.2700421940928, Blast_Score=71, Evalue=6e-13,
Organism=Caenorhabditis elegans, GI17541710, Length=243, Percent_Identity=27.9835390946502, Blast_Score=70, Evalue=9e-13,
Organism=Caenorhabditis elegans, GI193209708, Length=221, Percent_Identity=27.6018099547511, Blast_Score=65, Evalue=5e-11,
Organism=Caenorhabditis elegans, GI71983516, Length=237, Percent_Identity=27.8481012658228, Blast_Score=64, Evalue=1e-10,
Organism=Saccharomyces cerevisiae, GI6324498, Length=242, Percent_Identity=27.6859504132231, Blast_Score=70, Evalue=4e-13,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003439
- InterPro:   IPR017871
- InterPro:   IPR010230 [H]

Pfam domain/function: PF00005 ABC_tran [H]

EC number: NA

Molecular weight: Translated: 30876; Mature: 30745

Theoretical pI: Translated: 5.14; Mature: 5.14

Prosite motif: PS00211 ABC_TRANSPORTER_1 ; PS50893 ABC_TRANSPORTER_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
4.4 %Met     (Translated Protein)
4.4 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
4.0 %Met     (Mature Protein)
4.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTDGVDGTKEGRNSMTEHTPLFVIENLRAGIEGKEILRGVNLVIERGEIHALMGPNGSGK
CCCCCCCCHHHHHCHHHCCCCEEEHHHHCCCCHHHHHHHHHHEEECCCEEEEECCCCCCC
STLAYVIAGHPNYEVYEGRILYKGENVLELPPDERARMGMFLAFQYPTAIPGVTMANFLR
CEEEEEEECCCCCEEEECEEEECCCCEEECCCCCHHHCCEEEEEECCCCCCCHHHHHHHH
LAVNSVRKARLGEDKALSPREFRRLLREKLEMLRMDESFASRYLNEGFSGGEKKRAEILQ
HHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHH
MAMLEPEFAVLDETDSGLDIDALRTVSEGVNRLFNPNMALLVITHYQRILNYIRPHYVHV
HHHCCCCEEEECCCCCCCCHHHHHHHHHHHHHHHCCCEEEEEHHHHHHHHHHCCCEEEEE
MLDGKIAVSGGPELAEELEEKGYDWVKEQFAEAAS
EECCEEEECCCHHHHHHHHHCCHHHHHHHHHHHCC
>Mature Secondary Structure 
TDGVDGTKEGRNSMTEHTPLFVIENLRAGIEGKEILRGVNLVIERGEIHALMGPNGSGK
CCCCCCCHHHHHCHHHCCCCEEEHHHHCCCCHHHHHHHHHHEEECCCEEEEECCCCCCC
STLAYVIAGHPNYEVYEGRILYKGENVLELPPDERARMGMFLAFQYPTAIPGVTMANFLR
CEEEEEEECCCCCEEEECEEEECCCCEEECCCCCHHHCCEEEEEECCCCCCCHHHHHHHH
LAVNSVRKARLGEDKALSPREFRRLLREKLEMLRMDESFASRYLNEGFSGGEKKRAEILQ
HHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHH
MAMLEPEFAVLDETDSGLDIDALRTVSEGVNRLFNPNMALLVITHYQRILNYIRPHYVHV
HHHCCCCEEEECCCCCCCCHHHHHHHHHHHHHHHCCCEEEEEHHHHHHHHHHCCCEEEEE
MLDGKIAVSGGPELAEELEEKGYDWVKEQFAEAAS
EECCEEEECCCHHHHHHHHHCCHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 8590279; 8905231 [H]