| Definition | Thermomicrobium roseum DSM 5159 chromosome, complete genome. |
|---|---|
| Accession | NC_011959 |
| Length | 2,003,006 |
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The map label for this gene is glmU [H]
Identifier: 221632373
GI number: 221632373
Start: 348058
End: 349050
Strand: Reverse
Name: glmU [H]
Synonym: trd_0344
Alternate gene names: 221632373
Gene position: 349050-348058 (Counterclockwise)
Preceding gene: 221632380
Following gene: 221632372
Centisome position: 17.43
GC content: 62.64
Gene sequence:
>993_bases ATGCACGTGGTGATTCCCGTTGCCGGCCTGGGGACCCGACTTCGCCCCCACACCTGGAGCAAACCCAAGCCGCTCGTGAC CGTCGCCGGGAAACCGATCCTCGGCCATGTCCTGGACCGACTGAACCGGTTGCCACTCCAACGCGTCGTCTTCGTGACCG GATATCTCGGCGAGCAGATCGAAGAGTATGTGCGCACCCACTACCGATTCGACGCTGTGTTCGTCGAGCAACCTGAGCCG CTCGGGCAATCGCATGCCTTGCTCCAGGCTAAAGGTCTCGTCCATGGTCCGACGCTCGTCGTGTTTCCCGACCTCGTTTT CGATGCCAACCTCGAAGCGGTTCTCACTTGTCCGTGGGATGGAATCGTTTTCGTGAAAGAGGTCGACGATCCCCGCCGCT TCGGTGTCGTCATCGTCGAAGACGGACGGATCGCCCAACTGGTCGAAAAGCCAGCGCAACCGGTCTCTCGGCTCGCCGTG GTCGGGGTGTATTACTTCCGTGACTTCGGAGACCTCATCGCTGCGATCGAGCAGCAGATCGCCGAGGGCCGCAAGCGCGG GAACGAGTACTACTTGGCAGAAGCGATCCAGATCCTCATCGACCGCGGCCGCACGATCGTGGCGCAACCTGTCTCGGTTT GGGAGGATTGCGGCACGGTCGAAGCGCTCCTCGAAACCAATCGTTTCCTCCTGGACCGTCAAGCCGGCCCACAGCCGTCC TTCCCGACCGCCGTCGTCGTTCCACCGGTCGTGATCGATCCCACTGCCCGCATCGAGCACGCCGTGATCGGTCCTTACGT GAGCATCGGTCCGGGCGCGGTCGTCTCCCACGCGATCGTCACCGACTCGATCATCGACGAGGAGGCGACCATCAACGGCG TTATGCTGCACCGCTCAATCGTCGGTCGCCGCGCCCGGGTACTCGGTGACTTCGTGCGCGTGAACGTCGGCGATTCCTCG GAGATCACCTTCTCCGGACGAGACGGAGCATGA
Upstream 100 bases:
>100_bases CGCCCAGACTCGAGCACGAGCGCGGGTACACTCGGCGCTCGTTGGAATCGGACCTGCTCGGGAAGGACACACCCTCGATT CCGACGAGGGAGGTGAGCCG
Downstream 100 bases:
>100_bases GCTGATGCCTGCGCGTTGGCTCGAAGTCGCTGTCGAGACTGATGCTGAGGTCGCCGATGCAGTCGCCGAACTGTTCGCCC GCTTCGGCTACCAGCAGGGA
Product: putative glucose-1-phosphate thymidylyltransferase
Products: NA
Alternate protein names: UDP-N-acetylglucosamine pyrophosphorylase; N-acetylglucosamine-1-phosphate uridyltransferase; Glucosamine-1-phosphate N-acetyltransferase [H]
Number of amino acids: Translated: 330; Mature: 330
Protein sequence:
>330_residues MHVVIPVAGLGTRLRPHTWSKPKPLVTVAGKPILGHVLDRLNRLPLQRVVFVTGYLGEQIEEYVRTHYRFDAVFVEQPEP LGQSHALLQAKGLVHGPTLVVFPDLVFDANLEAVLTCPWDGIVFVKEVDDPRRFGVVIVEDGRIAQLVEKPAQPVSRLAV VGVYYFRDFGDLIAAIEQQIAEGRKRGNEYYLAEAIQILIDRGRTIVAQPVSVWEDCGTVEALLETNRFLLDRQAGPQPS FPTAVVVPPVVIDPTARIEHAVIGPYVSIGPGAVVSHAIVTDSIIDEEATINGVMLHRSIVGRRARVLGDFVRVNVGDSS EITFSGRDGA
Sequences:
>Translated_330_residues MHVVIPVAGLGTRLRPHTWSKPKPLVTVAGKPILGHVLDRLNRLPLQRVVFVTGYLGEQIEEYVRTHYRFDAVFVEQPEP LGQSHALLQAKGLVHGPTLVVFPDLVFDANLEAVLTCPWDGIVFVKEVDDPRRFGVVIVEDGRIAQLVEKPAQPVSRLAV VGVYYFRDFGDLIAAIEQQIAEGRKRGNEYYLAEAIQILIDRGRTIVAQPVSVWEDCGTVEALLETNRFLLDRQAGPQPS FPTAVVVPPVVIDPTARIEHAVIGPYVSIGPGAVVSHAIVTDSIIDEEATINGVMLHRSIVGRRARVLGDFVRVNVGDSS EITFSGRDGA >Mature_330_residues MHVVIPVAGLGTRLRPHTWSKPKPLVTVAGKPILGHVLDRLNRLPLQRVVFVTGYLGEQIEEYVRTHYRFDAVFVEQPEP LGQSHALLQAKGLVHGPTLVVFPDLVFDANLEAVLTCPWDGIVFVKEVDDPRRFGVVIVEDGRIAQLVEKPAQPVSRLAV VGVYYFRDFGDLIAAIEQQIAEGRKRGNEYYLAEAIQILIDRGRTIVAQPVSVWEDCGTVEALLETNRFLLDRQAGPQPS FPTAVVVPPVVIDPTARIEHAVIGPYVSIGPGAVVSHAIVTDSIIDEEATINGVMLHRSIVGRRARVLGDFVRVNVGDSS EITFSGRDGA
Specific function: Catalyzes the last two sequential reactions in the de novo biosynthetic pathway for UDP-N-acetyl-glucosamine (UDP- GlcNAc). Responsible for the acetylation of GlcN-1-P to GlcNAc-1- P, and for the uridyl transfer from UTP to GlcNAc-1-P, to produce UDP-GlcN
COG id: COG1209
COG function: function code M; dTDP-glucose pyrophosphorylase
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: In the C-terminal section; belongs to the transferase hexapeptide repeat family [H]
Homologues:
Organism=Homo sapiens, GI11761621, Length=332, Percent_Identity=29.5180722891566, Blast_Score=113, Evalue=3e-25, Organism=Homo sapiens, GI11761619, Length=338, Percent_Identity=29.2899408284024, Blast_Score=112, Evalue=4e-25, Organism=Escherichia coli, GI1788351, Length=273, Percent_Identity=26.3736263736264, Blast_Score=73, Evalue=3e-14, Organism=Escherichia coli, GI1790224, Length=248, Percent_Identity=28.2258064516129, Blast_Score=73, Evalue=3e-14, Organism=Escherichia coli, GI1790168, Length=312, Percent_Identity=26.2820512820513, Blast_Score=68, Evalue=7e-13, Organism=Caenorhabditis elegans, GI133931050, Length=340, Percent_Identity=29.4117647058824, Blast_Score=110, Evalue=1e-24, Organism=Caenorhabditis elegans, GI17509979, Length=331, Percent_Identity=27.190332326284, Blast_Score=91, Evalue=8e-19, Organism=Caenorhabditis elegans, GI17509981, Length=330, Percent_Identity=26.969696969697, Blast_Score=89, Evalue=4e-18, Organism=Saccharomyces cerevisiae, GI6320148, Length=344, Percent_Identity=27.3255813953488, Blast_Score=93, Evalue=5e-20, Organism=Drosophila melanogaster, GI21355443, Length=333, Percent_Identity=29.7297297297297, Blast_Score=111, Evalue=8e-25, Organism=Drosophila melanogaster, GI24644084, Length=333, Percent_Identity=29.7297297297297, Blast_Score=111, Evalue=8e-25,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR005835 - InterPro: IPR011004 [H]
Pfam domain/function: PF00483 NTP_transferase [H]
EC number: =2.7.7.23; =2.3.1.157 [H]
Molecular weight: Translated: 36190; Mature: 36190
Theoretical pI: Translated: 6.05; Mature: 6.05
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.6 %Cys (Translated Protein) 0.6 %Met (Translated Protein) 1.2 %Cys+Met (Translated Protein) 0.6 %Cys (Mature Protein) 0.6 %Met (Mature Protein) 1.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MHVVIPVAGLGTRLRPHTWSKPKPLVTVAGKPILGHVLDRLNRLPLQRVVFVTGYLGEQI CEEEEEECCCCCCCCCCCCCCCCCEEEECCCCHHHHHHHHHHCCCHHHHHHHHHHHHHHH EEYVRTHYRFDAVFVEQPEPLGQSHALLQAKGLVHGPTLVVFPDLVFDANLEAVLTCPWD HHHHHHHHEEEEEEEECCCCCCCCHHHHHCCCCCCCCEEEEECCEEECCCCCEEEECCCC GIVFVKEVDDPRRFGVVIVEDGRIAQLVEKPAQPVSRLAVVGVYYFRDFGDLIAAIEQQI CEEEEEECCCCCCEEEEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH AEGRKRGNEYYLAEAIQILIDRGRTIVAQPVSVWEDCGTVEALLETNRFLLDRQAGPQPS HHHHHCCCEEHHHHHHHHHHHCCCEEEECHHHHHHHCCHHHHHHHCCHHEEECCCCCCCC FPTAVVVPPVVIDPTARIEHAVIGPYVSIGPGAVVSHAIVTDSIIDEEATINGVMLHRSI CCEEEEECCEEECCCHHHCHHEECCCEECCCCHHHHHHHHHHHHHCCCHHCCHHHHHHHH VGRRARVLGDFVRVNVGDSSEITFSGRDGA HHHHHHHHHHEEEEECCCCCEEEECCCCCC >Mature Secondary Structure MHVVIPVAGLGTRLRPHTWSKPKPLVTVAGKPILGHVLDRLNRLPLQRVVFVTGYLGEQI CEEEEEECCCCCCCCCCCCCCCCCEEEECCCCHHHHHHHHHHCCCHHHHHHHHHHHHHHH EEYVRTHYRFDAVFVEQPEPLGQSHALLQAKGLVHGPTLVVFPDLVFDANLEAVLTCPWD HHHHHHHHEEEEEEEECCCCCCCCHHHHHCCCCCCCCEEEEECCEEECCCCCEEEECCCC GIVFVKEVDDPRRFGVVIVEDGRIAQLVEKPAQPVSRLAVVGVYYFRDFGDLIAAIEQQI CEEEEEECCCCCCEEEEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH AEGRKRGNEYYLAEAIQILIDRGRTIVAQPVSVWEDCGTVEALLETNRFLLDRQAGPQPS HHHHHCCCEEHHHHHHHHHHHCCCEEEECHHHHHHHCCHHHHHHHCCHHEEECCCCCCCC FPTAVVVPPVVIDPTARIEHAVIGPYVSIGPGAVVSHAIVTDSIIDEEATINGVMLHRSI CCEEEEECCEEECCCHHHCHHEECCCEECCCCHHHHHHHHHHHHHCCCHHCCHHHHHHHH VGRRARVLGDFVRVNVGDSSEITFSGRDGA HHHHHHHHHHEEEEECCCCCEEEECCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 8688087 [H]