Definition Thermomicrobium roseum DSM 5159 chromosome, complete genome.
Accession NC_011959
Length 2,003,006

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The map label for this gene is 221632276

Identifier: 221632276

GI number: 221632276

Start: 251166

End: 251498

Strand: Reverse

Name: 221632276

Synonym: trd_0243

Alternate gene names: NA

Gene position: 251498-251166 (Counterclockwise)

Preceding gene: 221632277

Following gene: 221632275

Centisome position: 12.56

GC content: 65.47

Gene sequence:

>333_bases
GTGGTCGCTCCATCCTCGCCGACCTGGCAAGAGCGACAGTCAGGATTCGGTCGCCGCCGAGTGAACGGATCGTTCCTTCC
CGTCCGCCCCAGTCACCGGAACTCCTCGCCGCGGCGACGACGGATCGTCGCGTTCGAGCCTTTTCGAGAGGTGACCGCAT
GGGTCAGAGCGCTCCTGCTCTCACGAGCCAACGGTCACGGCGAGGTTGCGCTGCTCTCCTCTCGTGCGGCGAGACCACTG
GTCGCACGCTCGGAATATCCTGCCGAGCACCCCGTGCGGATCCGCAGTAGACTGGTGACGGGCAGAACGAGCGATGCGGG
AAGGGAAGACTGA

Upstream 100 bases:

>100_bases
AAACGACGTCCCTCCCTCCACGGGAGTGCCCTGGTCCGAGCGACGCTCGGGCCAGGGCACCGATCGTTCGGCTCCTCCGA
TCGACTCCCCTGCTGAACAC

Downstream 100 bases:

>100_bases
TGGCTGAGCCGCAGTACTGGATCCTCGTCGGATCGGCCGAGAACCTGGAGGCGACGCAGGCGCACGGCTTCACCGTCCAG
GGCTTCAAGTCGCGTCACCG

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 110; Mature: 110

Protein sequence:

>110_residues
MVAPSSPTWQERQSGFGRRRVNGSFLPVRPSHRNSSPRRRRIVAFEPFREVTAWVRALLLSRANGHGEVALLSSRAARPL
VARSEYPAEHPVRIRSRLVTGRTSDAGRED

Sequences:

>Translated_110_residues
MVAPSSPTWQERQSGFGRRRVNGSFLPVRPSHRNSSPRRRRIVAFEPFREVTAWVRALLLSRANGHGEVALLSSRAARPL
VARSEYPAEHPVRIRSRLVTGRTSDAGRED
>Mature_110_residues
MVAPSSPTWQERQSGFGRRRVNGSFLPVRPSHRNSSPRRRRIVAFEPFREVTAWVRALLLSRANGHGEVALLSSRAARPL
VARSEYPAEHPVRIRSRLVTGRTSDAGRED

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 12412; Mature: 12412

Theoretical pI: Translated: 12.46; Mature: 12.46

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
0.9 %Met     (Translated Protein)
0.9 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
0.9 %Met     (Mature Protein)
0.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MVAPSSPTWQERQSGFGRRRVNGSFLPVRPSHRNSSPRRRRIVAFEPFREVTAWVRALLL
CCCCCCCCHHHHHCCCCCCCCCCCEECCCCCCCCCCCCCEEEEEECCHHHHHHHHHHHHH
SRANGHGEVALLSSRAARPLVARSEYPAEHPVRIRSRLVTGRTSDAGRED
HCCCCCCCEEEECCCCCCCCCCCCCCCCCCCHHHHHHHHCCCCCCCCCCC
>Mature Secondary Structure
MVAPSSPTWQERQSGFGRRRVNGSFLPVRPSHRNSSPRRRRIVAFEPFREVTAWVRALLL
CCCCCCCCHHHHHCCCCCCCCCCCEECCCCCCCCCCCCCEEEEEECCHHHHHHHHHHHHH
SRANGHGEVALLSSRAARPLVARSEYPAEHPVRIRSRLVTGRTSDAGRED
HCCCCCCCEEEECCCCCCCCCCCCCCCCCCCHHHHHHHHCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA