| Definition | Thermomicrobium roseum DSM 5159 chromosome, complete genome. |
|---|---|
| Accession | NC_011959 |
| Length | 2,003,006 |
Click here to switch to the map view.
The map label for this gene is 221632233
Identifier: 221632233
GI number: 221632233
Start: 205435
End: 206055
Strand: Reverse
Name: 221632233
Synonym: trd_0198
Alternate gene names: NA
Gene position: 206055-205435 (Counterclockwise)
Preceding gene: 221632234
Following gene: 221632231
Centisome position: 10.29
GC content: 62.96
Gene sequence:
>621_bases GTGGAACAGCTCATCGCTCAAGCAGCGCATCTTCTCATCGCCCTGGGCGGTGCGTACTATCTGGCACTCTGGTTCGCGCT CATCGTGTGGACGTTCCAGGACATCCAAACGCGGACCCGGAGCGTCATCGCCCAAATCTTCGCGACGCTGCTCGTCGTGC TCTTTTCCGTCCCGGGCGCACTGCTTTATCTCCTGATGCGCCCGCGCGAAACATTGGAAGAGCAGTACGAGCGGGCGCTG GAGGAGGAATATCTGATCCAGGACCTGGAAACAGCCGGGCGCTGCCCGCATTGTCAGCGACCGGTGCAGGACGACTTCCA ATTTTGCCCCTACTGTCGAGCACCGTTGAAACAACTCTGTATCGCCTGTGGCCGTCTCCTCAGCCTGGATTGGCCGCACT GCCCGTACTGTGGCACCCAGCAGCCGACCGAGGAAGGCGACGTGACCGTACAGGAGCGTCGCTCGCCGCTCGAGGCTGTG CAGCGTGCTCTCGGACGCACTCCGGGCGGACGACGACCGGAGAAGACCCTACCGGAAAACGAGGCGACCACGCTCCCACC TGGCTGGTCGCGGAGCATGCGGGAAAACGAGCCGGATACCAGCAAGTTACCGCGCGCCTGA
Upstream 100 bases:
>100_bases CCGCAGCCGATCGAGGTCGAGGTCGGCGGCGCCAACGTCTTCGTCGTTCCGATCGAGCGTTTCGAGCGCCTGCCCTGAAG CGAGGGGGTGGAGCACAGCG
Downstream 100 bases:
>100_bases TGGCGTGTCGGCATTTCGGGTTCGCCGGCTGGGCTGTGCCTCCGGTCGGATTTGGAAATTGAACTTGCTGCGGAATGCCT CGTAAAAGTTCGTACCCGGC
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 206; Mature: 206
Protein sequence:
>206_residues MEQLIAQAAHLLIALGGAYYLALWFALIVWTFQDIQTRTRSVIAQIFATLLVVLFSVPGALLYLLMRPRETLEEQYERAL EEEYLIQDLETAGRCPHCQRPVQDDFQFCPYCRAPLKQLCIACGRLLSLDWPHCPYCGTQQPTEEGDVTVQERRSPLEAV QRALGRTPGGRRPEKTLPENEATTLPPGWSRSMRENEPDTSKLPRA
Sequences:
>Translated_206_residues MEQLIAQAAHLLIALGGAYYLALWFALIVWTFQDIQTRTRSVIAQIFATLLVVLFSVPGALLYLLMRPRETLEEQYERAL EEEYLIQDLETAGRCPHCQRPVQDDFQFCPYCRAPLKQLCIACGRLLSLDWPHCPYCGTQQPTEEGDVTVQERRSPLEAV QRALGRTPGGRRPEKTLPENEATTLPPGWSRSMRENEPDTSKLPRA >Mature_206_residues MEQLIAQAAHLLIALGGAYYLALWFALIVWTFQDIQTRTRSVIAQIFATLLVVLFSVPGALLYLLMRPRETLEEQYERAL EEEYLIQDLETAGRCPHCQRPVQDDFQFCPYCRAPLKQLCIACGRLLSLDWPHCPYCGTQQPTEEGDVTVQERRSPLEAV QRALGRTPGGRRPEKTLPENEATTLPPGWSRSMRENEPDTSKLPRA
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 23443; Mature: 23443
Theoretical pI: Translated: 5.35; Mature: 5.35
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
3.9 %Cys (Translated Protein) 1.5 %Met (Translated Protein) 5.3 %Cys+Met (Translated Protein) 3.9 %Cys (Mature Protein) 1.5 %Met (Mature Protein) 5.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MEQLIAQAAHLLIALGGAYYLALWFALIVWTFQDIQTRTRSVIAQIFATLLVVLFSVPGA CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH LLYLLMRPRETLEEQYERALEEEYLIQDLETAGRCPHCQRPVQDDFQFCPYCRAPLKQLC HHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHCHHHHHHHHHHH IACGRLLSLDWPHCPYCGTQQPTEEGDVTVQERRSPLEAVQRALGRTPGGRRPEKTLPEN HHHHHHHHCCCCCCCCCCCCCCCCCCCCCHHHHCCHHHHHHHHHCCCCCCCCCCCCCCCC EATTLPPGWSRSMRENEPDTSKLPRA CCCCCCCCCCHHHHCCCCCCCCCCCC >Mature Secondary Structure MEQLIAQAAHLLIALGGAYYLALWFALIVWTFQDIQTRTRSVIAQIFATLLVVLFSVPGA CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH LLYLLMRPRETLEEQYERALEEEYLIQDLETAGRCPHCQRPVQDDFQFCPYCRAPLKQLC HHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHCHHHHHHHHHHH IACGRLLSLDWPHCPYCGTQQPTEEGDVTVQERRSPLEAVQRALGRTPGGRRPEKTLPEN HHHHHHHHCCCCCCCCCCCCCCCCCCCCCHHHHCCHHHHHHHHHCCCCCCCCCCCCCCCC EATTLPPGWSRSMRENEPDTSKLPRA CCCCCCCCCCHHHHCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA