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The map label for this gene is ygbK [C]

Identifier: 221632165

GI number: 221632165

Start: 136830

End: 138155

Strand: Reverse

Name: ygbK [C]

Synonym: trd_0131

Alternate gene names: 221632165

Gene position: 138155-136830 (Counterclockwise)

Preceding gene: 221632166

Following gene: 221632164

Centisome position: 6.9

GC content: 59.88

Gene sequence:

>1326_bases
ATGTCGGTCGACTTCGCGTACATCGCCGACGACTTCACCGGAGCGACTGACGTGCTCGAGGCACTCGCTTCAGCCGGTGC
CCGAGCCCGCCTCTACCTCGACTGCGCCCCGTCCGCTGTCGAGCCGGGGCTTCAGGCCATCGGTATCGCTACCACGGCTC
GTGCGACAGCCGCGGCTGAGTTACCGAATGTCCTCGCTCCCCTGTTCGATGCGCTGGTCTCTCTTCAGCCAGCAATCGTC
CAATACAAGGTATGCTCCACCTTCGATTCCTCGCCAGAAATCGGCAACATCGCCACGGTGATTTCCACAGCGTGGGAGCG
CTTTCCATACCAGTCTGTGCTTCCTGTGATCGTCGGGGCACCACGACTCGGGCGGTGGGTCGTGTTTGGCAACCTCTTCG
CTCGCTATGGGGTCACGGCGAAGATCTACCGGCTTGATCGGCACCCGGTTATGCGCTTCCATCCGATAACACCCATGGAG
GAAAGCGATCTCGGGGTCATCTTGCACCACCAAGGGCTTCCCCACCCCGTCGAGTACCTGACTGTGCTCGACTACACTCT
CGACCAGTCTACCTCGTTCGAGAAATTCCAGCGCACAGATCGAACGGTACTCATCGCCGACACCCTGCTCGAGGAGCACC
TGACAACACTCGGCCGACTGGTTCTCGCAGCCCTTCGCACGCCGGCACTGGTCATCGGATCGAGCGGAGCGACTCAAGCG
ATCTGCAACGCTCTCATCGAAAGAGGGAAGTTCTGTGGAGAACCACTCCTTGCCGCACCCTATCCAGTCGACCCGGTCCT
TGTCGTAAGCGGATCATGCTCGCGTGTGTCTGCAAACCAAACACAGCGAGCCATTCAAGCTGGTTTCTGCGAAATTGCTA
TCGTACCAGATAAATTACTCCACAATGATGCGTATATTGAGGAAGTAGCAGAAAAAATTGCGCAACAGTTGTGTCGCGGC
AAGAGCGTGATCGCACACACCTGCAGCGGTCCTGATGATCCCCGCTTGCTGAACCGTCACTCGCCGTGGGAGCGCCTGCA
TCTCGGCCGTGAACTCGGTCGTCAGCTCGGCGAGCTTGTCGCCCGCGTTGCCGGGCGCGTCCCCGTCCGCCGCATCATCG
TCACCGGTGGCGATACCTCAGGTTATGTCGCACTCGCCGCTGGCCTCAAGGCACTCGATCCGATCGCCGTAATCGCTCCG
GGTGCGCCCCTTTGCCGTGCCTGCGCTCCGCAAACCTGCCTGGACGGCATCGAATTCTGTTTCAAAGGAGGACAGACAGG
TCCTGAAGACTTCTATCTCATCGCGCGAGACGGCGTGAAGACGTGA

Upstream 100 bases:

>100_bases
AAGCCGCAGTCGCGGGGATCTCGCTCGCAGAATACGCGCAAACCCATCCTGATCTCGCAGCAGCTCTCCATCACTTCGGC
ACGGCTCGGAGGGGGCGCTG

Downstream 100 bases:

>100_bases
TCATTCGGTTCGAGGAAACTGGGAAGGAGGGAGTCCACTATGCAGGTTGCATTCCGCACGATCGGGATCGTCGGTGCTGC
AGGTCGTATGGGTACCCGGG

Product: ygbK domain-containing protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 441; Mature: 440

Protein sequence:

>441_residues
MSVDFAYIADDFTGATDVLEALASAGARARLYLDCAPSAVEPGLQAIGIATTARATAAAELPNVLAPLFDALVSLQPAIV
QYKVCSTFDSSPEIGNIATVISTAWERFPYQSVLPVIVGAPRLGRWVVFGNLFARYGVTAKIYRLDRHPVMRFHPITPME
ESDLGVILHHQGLPHPVEYLTVLDYTLDQSTSFEKFQRTDRTVLIADTLLEEHLTTLGRLVLAALRTPALVIGSSGATQA
ICNALIERGKFCGEPLLAAPYPVDPVLVVSGSCSRVSANQTQRAIQAGFCEIAIVPDKLLHNDAYIEEVAEKIAQQLCRG
KSVIAHTCSGPDDPRLLNRHSPWERLHLGRELGRQLGELVARVAGRVPVRRIIVTGGDTSGYVALAAGLKALDPIAVIAP
GAPLCRACAPQTCLDGIEFCFKGGQTGPEDFYLIARDGVKT

Sequences:

>Translated_441_residues
MSVDFAYIADDFTGATDVLEALASAGARARLYLDCAPSAVEPGLQAIGIATTARATAAAELPNVLAPLFDALVSLQPAIV
QYKVCSTFDSSPEIGNIATVISTAWERFPYQSVLPVIVGAPRLGRWVVFGNLFARYGVTAKIYRLDRHPVMRFHPITPME
ESDLGVILHHQGLPHPVEYLTVLDYTLDQSTSFEKFQRTDRTVLIADTLLEEHLTTLGRLVLAALRTPALVIGSSGATQA
ICNALIERGKFCGEPLLAAPYPVDPVLVVSGSCSRVSANQTQRAIQAGFCEIAIVPDKLLHNDAYIEEVAEKIAQQLCRG
KSVIAHTCSGPDDPRLLNRHSPWERLHLGRELGRQLGELVARVAGRVPVRRIIVTGGDTSGYVALAAGLKALDPIAVIAP
GAPLCRACAPQTCLDGIEFCFKGGQTGPEDFYLIARDGVKT
>Mature_440_residues
SVDFAYIADDFTGATDVLEALASAGARARLYLDCAPSAVEPGLQAIGIATTARATAAAELPNVLAPLFDALVSLQPAIVQ
YKVCSTFDSSPEIGNIATVISTAWERFPYQSVLPVIVGAPRLGRWVVFGNLFARYGVTAKIYRLDRHPVMRFHPITPMEE
SDLGVILHHQGLPHPVEYLTVLDYTLDQSTSFEKFQRTDRTVLIADTLLEEHLTTLGRLVLAALRTPALVIGSSGATQAI
CNALIERGKFCGEPLLAAPYPVDPVLVVSGSCSRVSANQTQRAIQAGFCEIAIVPDKLLHNDAYIEEVAEKIAQQLCRGK
SVIAHTCSGPDDPRLLNRHSPWERLHLGRELGRQLGELVARVAGRVPVRRIIVTGGDTSGYVALAAGLKALDPIAVIAPG
APLCRACAPQTCLDGIEFCFKGGQTGPEDFYLIARDGVKT

Specific function: Unknown

COG id: COG3395

COG function: function code S; Uncharacterized protein conserved in bacteria

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: To E.coli ygbK [H]

Homologues:

Organism=Escherichia coli, GI1789093, Length=424, Percent_Identity=26.6509433962264, Blast_Score=75, Evalue=7e-15,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR010737 [H]

Pfam domain/function: PF07005 DUF1537 [H]

EC number: NA

Molecular weight: Translated: 47401; Mature: 47270

Theoretical pI: Translated: 6.34; Mature: 6.34

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.7 %Cys     (Translated Protein)
0.7 %Met     (Translated Protein)
3.4 %Cys+Met (Translated Protein)
2.7 %Cys     (Mature Protein)
0.5 %Met     (Mature Protein)
3.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSVDFAYIADDFTGATDVLEALASAGARARLYLDCAPSAVEPGLQAIGIATTARATAAAE
CCCCEEEECCCCCCHHHHHHHHHCCCCCEEEEEECCCHHHCCCHHHHHHHHHHHHHHHHH
LPNVLAPLFDALVSLQPAIVQYKVCSTFDSSPEIGNIATVISTAWERFPYQSVLPVIVGA
HHHHHHHHHHHHHHCCHHHHEEHHHHCCCCCCCCCHHHHHHHHHHHHCCHHHHHHHHHCC
PRLGRWVVFGNLFARYGVTAKIYRLDRHPVMRFHPITPMEESDLGVILHHQGLPHPVEYL
CCCCCCHHHHHHHHHHCCEEEEEEECCCCCEEEECCCCCCCCCCEEEEECCCCCCHHHHH
TVLDYTLDQSTSFEKFQRTDRTVLIADTLLEEHLTTLGRLVLAALRTPALVIGSSGATQA
HHHHHHCCCCCCHHHHHHCCCEEEEHHHHHHHHHHHHHHHHHHHHCCCEEEEECCCCHHH
ICNALIERGKFCGEPLLAAPYPVDPVLVVSGSCSRVSANQTQRAIQAGFCEIAIVPDKLL
HHHHHHHCCCCCCCCCCCCCCCCCCEEEECCCCCCCCHHHHHHHHHCCCEEEEECCHHHH
HNDAYIEEVAEKIAQQLCRGKSVIAHTCSGPDDPRLLNRHSPWERLHLGRELGRQLGELV
CCHHHHHHHHHHHHHHHHCCCCEEEEECCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHH
ARVAGRVPVRRIIVTGGDTSGYVALAAGLKALDPIAVIAPGAPLCRACAPQTCLDGIEFC
HHHHCCCCEEEEEEECCCCCCHHHHHHCHHHCCCEEEECCCCHHHHHCCCHHHHHHHHHH
FKGGQTGPEDFYLIARDGVKT
HCCCCCCCCCEEEEECCCCCC
>Mature Secondary Structure 
SVDFAYIADDFTGATDVLEALASAGARARLYLDCAPSAVEPGLQAIGIATTARATAAAE
CCCEEEECCCCCCHHHHHHHHHCCCCCEEEEEECCCHHHCCCHHHHHHHHHHHHHHHHH
LPNVLAPLFDALVSLQPAIVQYKVCSTFDSSPEIGNIATVISTAWERFPYQSVLPVIVGA
HHHHHHHHHHHHHHCCHHHHEEHHHHCCCCCCCCCHHHHHHHHHHHHCCHHHHHHHHHCC
PRLGRWVVFGNLFARYGVTAKIYRLDRHPVMRFHPITPMEESDLGVILHHQGLPHPVEYL
CCCCCCHHHHHHHHHHCCEEEEEEECCCCCEEEECCCCCCCCCCEEEEECCCCCCHHHHH
TVLDYTLDQSTSFEKFQRTDRTVLIADTLLEEHLTTLGRLVLAALRTPALVIGSSGATQA
HHHHHHCCCCCCHHHHHHCCCEEEEHHHHHHHHHHHHHHHHHHHHCCCEEEEECCCCHHH
ICNALIERGKFCGEPLLAAPYPVDPVLVVSGSCSRVSANQTQRAIQAGFCEIAIVPDKLL
HHHHHHHCCCCCCCCCCCCCCCCCCEEEECCCCCCCCHHHHHHHHHCCCEEEEECCHHHH
HNDAYIEEVAEKIAQQLCRGKSVIAHTCSGPDDPRLLNRHSPWERLHLGRELGRQLGELV
CCHHHHHHHHHHHHHHHHCCCCEEEEECCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHH
ARVAGRVPVRRIIVTGGDTSGYVALAAGLKALDPIAVIAPGAPLCRACAPQTCLDGIEFC
HHHHCCCCEEEEEEECCCCCCHHHHHHCHHHCCCEEEECCCCHHHHHCCCHHHHHHHHHH
FKGGQTGPEDFYLIARDGVKT
HCCCCCCCCCEEEEECCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 7542800 [H]