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The map label for this gene is intQ [C]

Identifier: 221632161

GI number: 221632161

Start: 133752

End: 134702

Strand: Reverse

Name: intQ [C]

Synonym: trd_0127

Alternate gene names: 221632161

Gene position: 134702-133752 (Counterclockwise)

Preceding gene: 221632163

Following gene: 221632159

Centisome position: 6.72

GC content: 70.35

Gene sequence:

>951_bases
GTGCCTTGCGGCCGGCGCACGAGCCTGCGGCCGCGCACCTGGGCTGGCTACGAGTCGATCGTGCGGGTCCGGATCATTCC
GGCGCTCGGCCGCCTGCCCCTCGACAAGGTGGAGCCGCAGGTCCTGCAGGCCTTCGCCAGTCAGCTCCTCACGCAGGGGT
TGAGTGTCCAGTCCGTCCAGAACACGCATCCGCTCCTCCACCGGCCCTTCGCCGACGCCGTCAAGTGGGGCCTGCTCGGG
CGCAACCCTTGTGACCTGGTAGACCTGTCGCGGGCGAGCCGGCTGCAGCTTCGTGCCCTCACTGCCCCCGAGGTCGCGCG
GTTACTTGCCACCTGTGCGGACGATCCCCTGGGGCCGCTCGTCACCGTCGCTGTCCTGTCCGGGTTGCGACTGCGCGAGT
TGCTGGCCCTCCAGTGGGGCGATATCGACTGGGAACGGAGCGAACCCTCGGTGGTCCGGTCACTGCAGCGGGTGCGCGGT
CAGGGTTTGGTGGTGGTGCCACCGAAGACCGCGGCCTCCCGCCGGCGCGTTCCCCTGTCACCGCTGGCACTCGAGGCGCT
GCGACGCCAGCGGCGACACCAGGTCGAATGGCGGCTGGCGGCCGGGCCAACCTGGGCCGAAGGGGACTGGGTGTTTACCA
GCGTGCGGGGGGTGCCGCTCGACCCGGCCGAGACGACGCGGCGCTTCCACCGCCTGCTCGAGCGCGCAGGACTGCCCCAC
CGGCGCTTCCACGACTTGAGGCACACCACGGCGTCCTTGCTCCTGGCCGACGGGGTGCACCCGAAGGTGGTCGCCAGTAT
CCTGGGGCACAGTACGGTCCAGGTCACGCTGGATGTCTACTCGCGTGTCACGCCGGGGCTCGCGCGCCAAGCCGCGGAAC
GCTTGCAGCAGCTCGTTGCTAACTCAATTGCTCACTCGGCGCTCGCGTCGCGGGAAGAGGGTGGCCGATGA

Upstream 100 bases:

>100_bases
AGCGCGAGGCGCTCAAACTCCTCCAGAAGCTGCACGAAGAGCATGAACGGGGAGTGCTGGCCCATGGTCGGCCGCCGACG
CTCGCACAGTTCCTGTCGCA

Downstream 100 bases:

>100_bases
GCGGTCGATTTGCCTGTCCTGGTGCGGTGCCGGAGGTGGGACTCGAACCCACACGGGGTCGCCCCCAGCGGTTTTTGAGA
CCGCCGCGTCTGCCGTTCCG

Product: transposase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 316; Mature: 315

Protein sequence:

>316_residues
MPCGRRTSLRPRTWAGYESIVRVRIIPALGRLPLDKVEPQVLQAFASQLLTQGLSVQSVQNTHPLLHRPFADAVKWGLLG
RNPCDLVDLSRASRLQLRALTAPEVARLLATCADDPLGPLVTVAVLSGLRLRELLALQWGDIDWERSEPSVVRSLQRVRG
QGLVVVPPKTAASRRRVPLSPLALEALRRQRRHQVEWRLAAGPTWAEGDWVFTSVRGVPLDPAETTRRFHRLLERAGLPH
RRFHDLRHTTASLLLADGVHPKVVASILGHSTVQVTLDVYSRVTPGLARQAAERLQQLVANSIAHSALASREEGGR

Sequences:

>Translated_316_residues
MPCGRRTSLRPRTWAGYESIVRVRIIPALGRLPLDKVEPQVLQAFASQLLTQGLSVQSVQNTHPLLHRPFADAVKWGLLG
RNPCDLVDLSRASRLQLRALTAPEVARLLATCADDPLGPLVTVAVLSGLRLRELLALQWGDIDWERSEPSVVRSLQRVRG
QGLVVVPPKTAASRRRVPLSPLALEALRRQRRHQVEWRLAAGPTWAEGDWVFTSVRGVPLDPAETTRRFHRLLERAGLPH
RRFHDLRHTTASLLLADGVHPKVVASILGHSTVQVTLDVYSRVTPGLARQAAERLQQLVANSIAHSALASREEGGR
>Mature_315_residues
PCGRRTSLRPRTWAGYESIVRVRIIPALGRLPLDKVEPQVLQAFASQLLTQGLSVQSVQNTHPLLHRPFADAVKWGLLGR
NPCDLVDLSRASRLQLRALTAPEVARLLATCADDPLGPLVTVAVLSGLRLRELLALQWGDIDWERSEPSVVRSLQRVRGQ
GLVVVPPKTAASRRRVPLSPLALEALRRQRRHQVEWRLAAGPTWAEGDWVFTSVRGVPLDPAETTRRFHRLLERAGLPHR
RFHDLRHTTASLLLADGVHPKVVASILGHSTVQVTLDVYSRVTPGLARQAAERLQQLVANSIAHSALASREEGGR

Specific function: Site-specific tyrosine recombinase, which acts by catalyzing the cutting and rejoining of the recombining DNA molecules. The xerC-xerD complex is essential to convert dimers of the bacterial chromosome into monomers to permit their segregation at cell div

COG id: COG0582

COG function: function code L; Integrase

Gene ontology:

Cell location: Cytoplasm [H]

Metaboloic importance: Non Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the 'phage' integrase family. XerC subfamily [H]

Homologues:

Organism=Escherichia coli, GI1786748, Length=239, Percent_Identity=25.9414225941423, Blast_Score=64, Evalue=9e-12,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR011010
- InterPro:   IPR013762
- InterPro:   IPR002104
- InterPro:   IPR023109 [H]

Pfam domain/function: PF00589 Phage_integrase [H]

EC number: NA

Molecular weight: Translated: 35007; Mature: 34876

Theoretical pI: Translated: 11.85; Mature: 11.85

Prosite motif: PS00063 ALDOKETO_REDUCTASE_3

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.9 %Cys     (Translated Protein)
0.3 %Met     (Translated Protein)
1.3 %Cys+Met (Translated Protein)
1.0 %Cys     (Mature Protein)
0.0 %Met     (Mature Protein)
1.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MPCGRRTSLRPRTWAGYESIVRVRIIPALGRLPLDKVEPQVLQAFASQLLTQGLSVQSVQ
CCCCCCCCCCCCCCCCHHHHHHHHEEHHHCCCCHHHCCHHHHHHHHHHHHHCCCCHHHHH
NTHPLLHRPFADAVKWGLLGRNPCDLVDLSRASRLQLRALTAPEVARLLATCADDPLGPL
CCCCHHHCCHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHCCHHHHHHHHHHHCCCCCHHH
VTVAVLSGLRLRELLALQWGDIDWERSEPSVVRSLQRVRGQGLVVVPPKTAASRRRVPLS
HHHHHHCCHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHCCCCEEEECCCCHHHCCCCCCC
PLALEALRRQRRHQVEWRLAAGPTWAEGDWVFTSVRGVPLDPAETTRRFHRLLERAGLPH
HHHHHHHHHHHHHCCEEEEECCCCCCCCCEEEEEECCCCCCHHHHHHHHHHHHHHCCCCH
RRFHDLRHTTASLLLADGVHPKVVASILGHSTVQVTLDVYSRVTPGLARQAAERLQQLVA
HHHHHHHHHHHHHHHHCCCCHHHHHHHHCCCCEEEHHHHHHHCCHHHHHHHHHHHHHHHH
NSIAHSALASREEGGR
HHHHHHHHHHHCCCCC
>Mature Secondary Structure 
PCGRRTSLRPRTWAGYESIVRVRIIPALGRLPLDKVEPQVLQAFASQLLTQGLSVQSVQ
CCCCCCCCCCCCCCCHHHHHHHHEEHHHCCCCHHHCCHHHHHHHHHHHHHCCCCHHHHH
NTHPLLHRPFADAVKWGLLGRNPCDLVDLSRASRLQLRALTAPEVARLLATCADDPLGPL
CCCCHHHCCHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHCCHHHHHHHHHHHCCCCCHHH
VTVAVLSGLRLRELLALQWGDIDWERSEPSVVRSLQRVRGQGLVVVPPKTAASRRRVPLS
HHHHHHCCHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHCCCCEEEECCCCHHHCCCCCCC
PLALEALRRQRRHQVEWRLAAGPTWAEGDWVFTSVRGVPLDPAETTRRFHRLLERAGLPH
HHHHHHHHHHHHHCCEEEEECCCCCCCCCEEEEEECCCCCCHHHHHHHHHHHHHHCCCCH
RRFHDLRHTTASLLLADGVHPKVVASILGHSTVQVTLDVYSRVTPGLARQAAERLQQLVA
HHHHHHHHHHHHHHHHCCCCHHHHHHHHCCCCEEEHHHHHHHCCHHHHHHHHHHHHHHHH
NSIAHSALASREEGGR
HHHHHHHHHHHCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 11997336 [H]