| Definition | Yersinia pestis KIM 10 chromosome, complete genome. |
|---|---|
| Accession | NC_004088 |
| Length | 4,600,755 |
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The map label for this gene is 22127940
Identifier: 22127940
GI number: 22127940
Start: 4515252
End: 4515584
Strand: Reverse
Name: 22127940
Synonym: y4070
Alternate gene names: NA
Gene position: 4515584-4515252 (Counterclockwise)
Preceding gene: 22127942
Following gene: 22127938
Centisome position: 98.15
GC content: 33.33
Gene sequence:
>333_bases GTGACAGAATTAGAAATGGAAAAAAAATTGCTAAATAACGGCTTTACTGCCAAGAATATTACGCATATGAGGAAAATAAT TTCGCGTGATGACCAGCAAAAAGAGACCTATTCCAGTTTACTCATAGATTTAAAGAAGCGTTTTTTCGCGGGATGTTTGA TTTGTGCTATTTTATTTACCCCTCTTATTTTTATGATGTTCAATGATTATACATCGGATGAAATATTCAGTTATCTTGTC GCCCTGATTTTTGGCTTGTATATGACTTATTATATAACGCCACTGAACTTAGCATGGAAGTCATATAGATATCTTTCCAA TAAGGAGGAATGA
Upstream 100 bases:
>100_bases AAAGAAAAAGTAGAACAGGGTGTATCAGGATAAATATTGATTAGACGTCAGTCTATTATCACGATAGAATATTACAATGC AGTAATAAGGAGATAACGCA
Downstream 100 bases:
>100_bases TCCTCCTTGCTGTCTATTTTCTTTCATACTCTGAATTATCATCCAGATAGGTGCTACCGATAACTCTTATTTTATTTGTA GCCTTAACACCTTGTATGGT
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 110; Mature: 109
Protein sequence:
>110_residues MTELEMEKKLLNNGFTAKNITHMRKIISRDDQQKETYSSLLIDLKKRFFAGCLICAILFTPLIFMMFNDYTSDEIFSYLV ALIFGLYMTYYITPLNLAWKSYRYLSNKEE
Sequences:
>Translated_110_residues MTELEMEKKLLNNGFTAKNITHMRKIISRDDQQKETYSSLLIDLKKRFFAGCLICAILFTPLIFMMFNDYTSDEIFSYLV ALIFGLYMTYYITPLNLAWKSYRYLSNKEE >Mature_109_residues TELEMEKKLLNNGFTAKNITHMRKIISRDDQQKETYSSLLIDLKKRFFAGCLICAILFTPLIFMMFNDYTSDEIFSYLVA LIFGLYMTYYITPLNLAWKSYRYLSNKEE
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 13084; Mature: 12952
Theoretical pI: Translated: 8.17; Mature: 8.17
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.8 %Cys (Translated Protein) 5.5 %Met (Translated Protein) 7.3 %Cys+Met (Translated Protein) 1.8 %Cys (Mature Protein) 4.6 %Met (Mature Protein) 6.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTELEMEKKLLNNGFTAKNITHMRKIISRDDQQKETYSSLLIDLKKRFFAGCLICAILFT CCHHHHHHHHHHCCCCHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH PLIFMMFNDYTSDEIFSYLVALIFGLYMTYYITPLNLAWKSYRYLSNKEE HHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCC >Mature Secondary Structure TELEMEKKLLNNGFTAKNITHMRKIISRDDQQKETYSSLLIDLKKRFFAGCLICAILFT CHHHHHHHHHHCCCCHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH PLIFMMFNDYTSDEIFSYLVALIFGLYMTYYITPLNLAWKSYRYLSNKEE HHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA