| Definition | Yersinia pestis KIM 10 chromosome, complete genome. |
|---|---|
| Accession | NC_004088 |
| Length | 4,600,755 |
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The map label for this gene is 22127918
Identifier: 22127918
GI number: 22127918
Start: 4488897
End: 4489082
Strand: Reverse
Name: 22127918
Synonym: y4048
Alternate gene names: NA
Gene position: 4489082-4488897 (Counterclockwise)
Preceding gene: 22127921
Following gene: 22127917
Centisome position: 97.57
GC content: 39.78
Gene sequence:
>186_bases ATGAGTGATTTTTTCAATGATTTAATGACATCCGCGAAGCAGGCTGTAGCTATTAGTCATGATGAATTAAAAGCGGGCAG AGTTACAGAAGTCCCTATCCCCGATGTGAAAGAAATTAGAAAGAAAACAGGGTATAAGCAAAAAGATTTCGCCAAACCTT GTGGGTGTGAGTCCTTCATTGGTTGA
Upstream 100 bases:
>100_bases GGCTTTTTACTGTCTACCCAAAAAATCAAAAAGATACGCTGACGAGTAGCGAGAAACAGCAATTCAAAGATGTGATAATA CAAATCAAAGGGAGTATGGC
Downstream 100 bases:
>100_bases AGCATGGGAGCAACATAGAAGAATTCCATCAGGTAGTTCACTTAAGCTATTGATCATGATCGACCCCCTCCCTAATTAAC GAACTTTCAGGAGTTTAGTG
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 61; Mature: 60
Protein sequence:
>61_residues MSDFFNDLMTSAKQAVAISHDELKAGRVTEVPIPDVKEIRKKTGYKQKDFAKPCGCESFIG
Sequences:
>Translated_61_residues MSDFFNDLMTSAKQAVAISHDELKAGRVTEVPIPDVKEIRKKTGYKQKDFAKPCGCESFIG >Mature_60_residues SDFFNDLMTSAKQAVAISHDELKAGRVTEVPIPDVKEIRKKTGYKQKDFAKPCGCESFIG
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 6778; Mature: 6647
Theoretical pI: Translated: 8.22; Mature: 8.22
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
3.3 %Cys (Translated Protein) 3.3 %Met (Translated Protein) 6.6 %Cys+Met (Translated Protein) 3.3 %Cys (Mature Protein) 1.7 %Met (Mature Protein) 5.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSDFFNDLMTSAKQAVAISHDELKAGRVTEVPIPDVKEIRKKTGYKQKDFAKPCGCESFI CCHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCHHHHHHHCCCCCCCCCCCCCCCCCC G C >Mature Secondary Structure SDFFNDLMTSAKQAVAISHDELKAGRVTEVPIPDVKEIRKKTGYKQKDFAKPCGCESFI CHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCHHHHHHHCCCCCCCCCCCCCCCCCC G C
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA