| Definition | Yersinia pestis KIM 10 chromosome, complete genome. |
|---|---|
| Accession | NC_004088 |
| Length | 4,600,755 |
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The map label for this gene is 22127718
Identifier: 22127718
GI number: 22127718
Start: 4284520
End: 4285017
Strand: Direct
Name: 22127718
Synonym: y3847
Alternate gene names: NA
Gene position: 4284520-4285017 (Clockwise)
Preceding gene: 22127717
Following gene: 22127719
Centisome position: 93.13
GC content: 32.93
Gene sequence:
>498_bases ATGTTAAAAACAAAATACAATATCTTATTCGGGGTGGTTACCATTGGAATACTTTATTCTGCATGGGAGATTGCTCGGCC AGTAGAGATTGTTGATGTTCATATTAATAATTCTAGTGAAGGCTATTACTCTAACTATATTCTTGTTAATAATTTCCCTA TAACTGATAGGGGAAGAATTGCTTGGTGGGAAAATAATAAGTCTATGTTAAAAGAGAAATATAATATTCCTAAACATCAC TTAGATGATAGATTTTCAGTTAGCGTTTGGGATTTTGGTGATGGCTATAAAAAATTGCCTACCGGGGATGTGCGGCTCAG TCTGGAATCATCTGATTTACTTTGTTTTGATGATATGAAAGTAGTAGAAAATTGCATAGAAAAAAAATCTCTTTTATTTA TAAGAAAATATGATGATAGATACGTTTTTTCTATGGGTAGGTCATCTTACCGACAATCAGTAGAGGGCGGTGAAATAACA AAAGATGTCGAGGATTAG
Upstream 100 bases:
>100_bases CATATTTGGTTTGTTCTCCAGCGTTGGAGAGGATTAGGCTATAAACCTTTCCTGACTAATATGGAAGCCAGTATAGAAAT CACAGGAAAACGAAAATAAA
Downstream 100 bases:
>100_bases TACTGGAGTTTTACAATGTGAGTGATTGCAAAAATAATTTATTATCTAGCGGAGATCGCACCTAAAAATGAAAAATAGCA AACATAAAATTCTATTAGGG
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 165; Mature: 165
Protein sequence:
>165_residues MLKTKYNILFGVVTIGILYSAWEIARPVEIVDVHINNSSEGYYSNYILVNNFPITDRGRIAWWENNKSMLKEKYNIPKHH LDDRFSVSVWDFGDGYKKLPTGDVRLSLESSDLLCFDDMKVVENCIEKKSLLFIRKYDDRYVFSMGRSSYRQSVEGGEIT KDVED
Sequences:
>Translated_165_residues MLKTKYNILFGVVTIGILYSAWEIARPVEIVDVHINNSSEGYYSNYILVNNFPITDRGRIAWWENNKSMLKEKYNIPKHH LDDRFSVSVWDFGDGYKKLPTGDVRLSLESSDLLCFDDMKVVENCIEKKSLLFIRKYDDRYVFSMGRSSYRQSVEGGEIT KDVED >Mature_165_residues MLKTKYNILFGVVTIGILYSAWEIARPVEIVDVHINNSSEGYYSNYILVNNFPITDRGRIAWWENNKSMLKEKYNIPKHH LDDRFSVSVWDFGDGYKKLPTGDVRLSLESSDLLCFDDMKVVENCIEKKSLLFIRKYDDRYVFSMGRSSYRQSVEGGEIT KDVED
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 19254; Mature: 19254
Theoretical pI: Translated: 5.74; Mature: 5.74
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.2 %Cys (Translated Protein) 2.4 %Met (Translated Protein) 3.6 %Cys+Met (Translated Protein) 1.2 %Cys (Mature Protein) 2.4 %Met (Mature Protein) 3.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MLKTKYNILFGVVTIGILYSAWEIARPVEIVDVHINNSSEGYYSNYILVNNFPITDRGRI CCCCHHHHHHHHHHHHHHHHHHHHCCCEEEEEEEECCCCCCEEEEEEEEECCCCCCCCEE AWWENNKSMLKEKYNIPKHHLDDRFSVSVWDFGDGYKKLPTGDVRLSLESSDLLCFDDMK EEEECCHHHHHHHCCCCCHHCCCCEEEEEEECCCCCCCCCCCCEEEEECCCCEEEECCHH VVENCIEKKSLLFIRKYDDRYVFSMGRSSYRQSVEGGEITKDVED HHHHHHCCCCEEEEEECCCEEEEECCHHHHHHCCCCCCCCCCCCC >Mature Secondary Structure MLKTKYNILFGVVTIGILYSAWEIARPVEIVDVHINNSSEGYYSNYILVNNFPITDRGRI CCCCHHHHHHHHHHHHHHHHHHHHCCCEEEEEEEECCCCCCEEEEEEEEECCCCCCCCEE AWWENNKSMLKEKYNIPKHHLDDRFSVSVWDFGDGYKKLPTGDVRLSLESSDLLCFDDMK EEEECCHHHHHHHCCCCCHHCCCCEEEEEEECCCCCCCCCCCCEEEEECCCCEEEECCHH VVENCIEKKSLLFIRKYDDRYVFSMGRSSYRQSVEGGEITKDVED HHHHHHCCCCEEEEEECCCEEEEECCHHHHHHCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA