Definition Yersinia pestis KIM 10 chromosome, complete genome.
Accession NC_004088
Length 4,600,755

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The map label for this gene is 22127254

Identifier: 22127254

GI number: 22127254

Start: 3724277

End: 3725389

Strand: Reverse

Name: 22127254

Synonym: y3378

Alternate gene names: NA

Gene position: 3725389-3724277 (Counterclockwise)

Preceding gene: 22127262

Following gene: 22127251

Centisome position: 80.97

GC content: 55.44

Gene sequence:

>1113_bases
GTGGTGTTACCGGTATTGGTAAGCCGCACTCATCTGTCATTGTCGGTGTGGGCGGGTCTATTGACACTTGGCTCAATGCT
ATTTTTAGTGGGATCGGCATGGTGGGGCCGGCAATCGGAGATCCGTGGCTGCAAATTTGTTGTCATCATGGCACTGGCAG
GTTACTTGCTTAGCTTTGTTTTATTGGCGCTGGCGGTGTGGGGGTTGTCAGCAGGGTGGTTATCGGAAATGGCCGGTCTG
GGCTGGCTAATCGTGGCTCGTATTATTTATGGCCTGACCGTCTCTGGTATGGTGCCCGCTAGCCAGACCTGGGCACTACA
GCGTGCCGGTTATGAGCAACGGATGGCGGCGCTGGCGACCATCAGTTCGGGGCTGAGCTGTGGCCGTCTGCTCGGCCCAT
TGTGTGCCGCCCTCGCGCTCTCAATACACCCGATAGCCCCCCTGTGGCTGATGGCAATTGCACCACTGATCGCACTGCTG
GTGGTGTATCGCCAATACAATGACCCGCCGTTACCCCCAGTGGTGCATCAACAAAACCGTTTACGCCTCAATATGTTGCC
TTATTTACTGTGCGCGTTGTTGCTAGCGGCAACCGTCAGCCTGATGCAACTTGGCCTGGCACCTCACTTAAGTCGATTGT
TTAGCCATTCGGCCACCACGGTGAGCCACCACGTGGCCATTTTGCTTAGCATAGCCGCGGGTTGTACGTTGCTGGCACAG
TTTCTGGTGGTTCGTCCACAACGTTTTACGCCACCTCAGTTGCTGCTAGTGGCAGCCTTGCTCATGGTGCTTGGCTTGGG
GCTGATGTGTGTTCAACCGCTGGTATTATTCTATCTAGGTTGTGCGCTGGCTTCTTTCGGCGCCGCGATGGCGACACCGG
GTTACCAACTGATGTTGAACGACCGGTTATCTACTGGCAAAGGCTCCGGCGTGATCGCTACCAGCCATACATTGGGCTAT
GGCATGAGTGCATTGATGGTGCCGGTAGTCGCAAAATTTTATGGTGAGTCACAGTTGGTAGCCGCGGCGTTCATGATGGC
CATTTTGTTGGGGGGAATCAGTGGCTGGCTGTGGTGCCAGCATCGAACAACCGCCCATTCTGTGGGAGAGTAA

Upstream 100 bases:

>100_bases
CTCAGAGTCTGACGCTCGCTCAAGCGGGCTTACATCGTCTACCCATTGGCCTTTAGCGTTCTGCGTTGGGTTACTGGGCA
TCGGGCAAAACGGTTTATTA

Downstream 100 bases:

>100_bases
CTGGCGCTGCCCGGCCAGCATCGGTGACAAACGGTTGGCGTGGGTTGGTCCGTTAGCGGTGATGGTCGCGCCGCCCGATG
ATGAGCAGGTGTTGGCTACT

Product: hypothetical protein

Products: NA

Alternate protein names: Permease; MFS Transporter; Transport Protein ShiF

Number of amino acids: Translated: 370; Mature: 370

Protein sequence:

>370_residues
MVLPVLVSRTHLSLSVWAGLLTLGSMLFLVGSAWWGRQSEIRGCKFVVIMALAGYLLSFVLLALAVWGLSAGWLSEMAGL
GWLIVARIIYGLTVSGMVPASQTWALQRAGYEQRMAALATISSGLSCGRLLGPLCAALALSIHPIAPLWLMAIAPLIALL
VVYRQYNDPPLPPVVHQQNRLRLNMLPYLLCALLLAATVSLMQLGLAPHLSRLFSHSATTVSHHVAILLSIAAGCTLLAQ
FLVVRPQRFTPPQLLLVAALLMVLGLGLMCVQPLVLFYLGCALASFGAAMATPGYQLMLNDRLSTGKGSGVIATSHTLGY
GMSALMVPVVAKFYGESQLVAAAFMMAILLGGISGWLWCQHRTTAHSVGE

Sequences:

>Translated_370_residues
MVLPVLVSRTHLSLSVWAGLLTLGSMLFLVGSAWWGRQSEIRGCKFVVIMALAGYLLSFVLLALAVWGLSAGWLSEMAGL
GWLIVARIIYGLTVSGMVPASQTWALQRAGYEQRMAALATISSGLSCGRLLGPLCAALALSIHPIAPLWLMAIAPLIALL
VVYRQYNDPPLPPVVHQQNRLRLNMLPYLLCALLLAATVSLMQLGLAPHLSRLFSHSATTVSHHVAILLSIAAGCTLLAQ
FLVVRPQRFTPPQLLLVAALLMVLGLGLMCVQPLVLFYLGCALASFGAAMATPGYQLMLNDRLSTGKGSGVIATSHTLGY
GMSALMVPVVAKFYGESQLVAAAFMMAILLGGISGWLWCQHRTTAHSVGE
>Mature_370_residues
MVLPVLVSRTHLSLSVWAGLLTLGSMLFLVGSAWWGRQSEIRGCKFVVIMALAGYLLSFVLLALAVWGLSAGWLSEMAGL
GWLIVARIIYGLTVSGMVPASQTWALQRAGYEQRMAALATISSGLSCGRLLGPLCAALALSIHPIAPLWLMAIAPLIALL
VVYRQYNDPPLPPVVHQQNRLRLNMLPYLLCALLLAATVSLMQLGLAPHLSRLFSHSATTVSHHVAILLSIAAGCTLLAQ
FLVVRPQRFTPPQLLLVAALLMVLGLGLMCVQPLVLFYLGCALASFGAAMATPGYQLMLNDRLSTGKGSGVIATSHTLGY
GMSALMVPVVAKFYGESQLVAAAFMMAILLGGISGWLWCQHRTTAHSVGE

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 39467; Mature: 39467

Theoretical pI: Translated: 9.61; Mature: 9.61

Prosite motif: PS50850 MFS

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.2 %Cys     (Translated Protein)
4.6 %Met     (Translated Protein)
6.8 %Cys+Met (Translated Protein)
2.2 %Cys     (Mature Protein)
4.6 %Met     (Mature Protein)
6.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MVLPVLVSRTHLSLSVWAGLLTLGSMLFLVGSAWWGRQSEIRGCKFVVIMALAGYLLSFV
CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHHH
LLALAVWGLSAGWLSEMAGLGWLIVARIIYGLTVSGMVPASQTWALQRAGYEQRMAALAT
HHHHHHHCCCHHHHHHHHCHHHHHHHHHHHHHHHCCCCCCHHHHHHHHCCHHHHHHHHHH
ISSGLSCGRLLGPLCAALALSIHPIAPLWLMAIAPLIALLVVYRQYNDPPLPPVVHQQNR
HHCCCHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCC
LRLNMLPYLLCALLLAATVSLMQLGLAPHLSRLFSHSATTVSHHVAILLSIAAGCTLLAQ
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHH
FLVVRPQRFTPPQLLLVAALLMVLGLGLMCVQPLVLFYLGCALASFGAAMATPGYQLMLN
HHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEE
DRLSTGKGSGVIATSHTLGYGMSALMVPVVAKFYGESQLVAAAFMMAILLGGISGWLWCQ
CCCCCCCCCCEEEECCHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHCHHHHEEEC
HRTTAHSVGE
CCCCCCCCCC
>Mature Secondary Structure
MVLPVLVSRTHLSLSVWAGLLTLGSMLFLVGSAWWGRQSEIRGCKFVVIMALAGYLLSFV
CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHHH
LLALAVWGLSAGWLSEMAGLGWLIVARIIYGLTVSGMVPASQTWALQRAGYEQRMAALAT
HHHHHHHCCCHHHHHHHHCHHHHHHHHHHHHHHHCCCCCCHHHHHHHHCCHHHHHHHHHH
ISSGLSCGRLLGPLCAALALSIHPIAPLWLMAIAPLIALLVVYRQYNDPPLPPVVHQQNR
HHCCCHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCC
LRLNMLPYLLCALLLAATVSLMQLGLAPHLSRLFSHSATTVSHHVAILLSIAAGCTLLAQ
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHH
FLVVRPQRFTPPQLLLVAALLMVLGLGLMCVQPLVLFYLGCALASFGAAMATPGYQLMLN
HHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEE
DRLSTGKGSGVIATSHTLGYGMSALMVPVVAKFYGESQLVAAAFMMAILLGGISGWLWCQ
CCCCCCCCCCEEEECCHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHCHHHHEEEC
HRTTAHSVGE
CCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA