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The map label for this gene is ytbI [H]

Identifier: 22127250

GI number: 22127250

Start: 3719465

End: 3720115

Strand: Direct

Name: ytbI [H]

Synonym: y3374

Alternate gene names: 22127250

Gene position: 3719465-3720115 (Clockwise)

Preceding gene: 22127240

Following gene: 22127252

Centisome position: 80.84

GC content: 41.17

Gene sequence:

>651_bases
ATGTTAGAAATTTTCGATGTCAGATACGACGAGTTGACCGATATACGGTCTGAGGACCTGTATAAATTAAGGAAAAAGAC
GTTTAAGGATCGTCTTAACTGGGAGGTGAATTGCAGCAACGGCATGGAGTTTGATGAATATGATAATTCGGATACACGCT
ATCTCCTTGGTATTTACCAAGGTCAACTAATCTGCAGTGTGCGTTTTATAGAACTTCACCTGCCTAATATGATCACTCAT
ACCTTCAATGCACTCTTCGATGACGTGGCATTACCTAAGAGGGGCTATATAGAATCGAGCCGTTTCTTCGTTGATAAAAC
CCGTGCCAAGTTGCTTTTTGGTAACCATTACCCCATAAGCTACTTATTCTTTTTATCGATTATTAATTACTCCCGACATA
ATGGCTACACAGGTATTTATACTATCGTCAGCCGAGCAATGTTGACCATCCTTAAACGATCAGGCTGGCAGGTTGAGGTG
ATTAAAGAAGCACATATTACCGAAAAAGAAAGGATATACTTACTGCATCTCCCGATAGATCGGGACAATCAAGCACGGCT
GCTTTTACAGGTTAATCAGCGTTTGCAGGATCCATGTTCAGTATTAAGTACATGGCCTATATCGTTGCCCGTTATGCCAG
AATCGGCTTAA

Upstream 100 bases:

>100_bases
CAATCCAATTATTCCCTAATGTGACAACTTATTTTGTGATGATACAATACAATTCAATTTAACATATGCACACTGGCAGT
ATTAAATATCAGGAAAGATA

Downstream 100 bases:

>100_bases
TAATTTCCAGTTCAACACCAAGCCCGATTGCCTGTTTTGCGTTAATTACACCCAACTTTTTTACCACATTTCCTATGTGA
TATTTTACTGTTCTGGGGGT

Product: N-acylhomoserine lactone synthase

Products: NA

Alternate protein names: Autoinducer synthesis protein yukI [H]

Number of amino acids: Translated: 216; Mature: 216

Protein sequence:

>216_residues
MLEIFDVRYDELTDIRSEDLYKLRKKTFKDRLNWEVNCSNGMEFDEYDNSDTRYLLGIYQGQLICSVRFIELHLPNMITH
TFNALFDDVALPKRGYIESSRFFVDKTRAKLLFGNHYPISYLFFLSIINYSRHNGYTGIYTIVSRAMLTILKRSGWQVEV
IKEAHITEKERIYLLHLPIDRDNQARLLLQVNQRLQDPCSVLSTWPISLPVMPESA

Sequences:

>Translated_216_residues
MLEIFDVRYDELTDIRSEDLYKLRKKTFKDRLNWEVNCSNGMEFDEYDNSDTRYLLGIYQGQLICSVRFIELHLPNMITH
TFNALFDDVALPKRGYIESSRFFVDKTRAKLLFGNHYPISYLFFLSIINYSRHNGYTGIYTIVSRAMLTILKRSGWQVEV
IKEAHITEKERIYLLHLPIDRDNQARLLLQVNQRLQDPCSVLSTWPISLPVMPESA
>Mature_216_residues
MLEIFDVRYDELTDIRSEDLYKLRKKTFKDRLNWEVNCSNGMEFDEYDNSDTRYLLGIYQGQLICSVRFIELHLPNMITH
TFNALFDDVALPKRGYIESSRFFVDKTRAKLLFGNHYPISYLFFLSIINYSRHNGYTGIYTIVSRAMLTILKRSGWQVEV
IKEAHITEKERIYLLHLPIDRDNQARLLLQVNQRLQDPCSVLSTWPISLPVMPESA

Specific function: Required for the synthesis of an acyl-HSL autoinducer that binds to yukR and which is involved in the regulation of motility and morphology [H]

COG id: COG3916

COG function: function code TQ; N-acyl-L-homoserine lactone synthetase

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the autoinducer synthase family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR016181
- InterPro:   IPR001690
- InterPro:   IPR018311 [H]

Pfam domain/function: PF00765 Autoind_synth [H]

EC number: =2.3.1.184 [H]

Molecular weight: Translated: 25497; Mature: 25497

Theoretical pI: Translated: 7.12; Mature: 7.12

Prosite motif: PS00949 AUTOINDUCERS_SYNTH

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.4 %Cys     (Translated Protein)
2.3 %Met     (Translated Protein)
3.7 %Cys+Met (Translated Protein)
1.4 %Cys     (Mature Protein)
2.3 %Met     (Mature Protein)
3.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLEIFDVRYDELTDIRSEDLYKLRKKTFKDRLNWEVNCSNGMEFDEYDNSDTRYLLGIYQ
CCEEEECCHHHHHCCCHHHHHHHHHHHHHHHCCEEEECCCCCCCCCCCCCCCEEEEEEEC
GQLICSVRFIELHLPNMITHTFNALFDDVALPKRGYIESSRFFVDKTRAKLLFGNHYPIS
CEEEEEEEEEEEECCHHHHHHHHHHHHHHCCCCCCCCCCCEEEEECHHEEEEECCCCCHH
YLFFLSIINYSRHNGYTGIYTIVSRAMLTILKRSGWQVEVIKEAHITEKERIYLLHLPID
HHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHCCCCEEEEEECCCCCCCCEEEEEEECCC
RDNQARLLLQVNQRLQDPCSVLSTWPISLPVMPESA
CCCCHHHHHHHHHHHCCHHHHHHCCCCEECCCCCCC
>Mature Secondary Structure
MLEIFDVRYDELTDIRSEDLYKLRKKTFKDRLNWEVNCSNGMEFDEYDNSDTRYLLGIYQ
CCEEEECCHHHHHCCCHHHHHHHHHHHHHHHCCEEEECCCCCCCCCCCCCCCEEEEEEEC
GQLICSVRFIELHLPNMITHTFNALFDDVALPKRGYIESSRFFVDKTRAKLLFGNHYPIS
CEEEEEEEEEEEECCHHHHHHHHHHHHHHCCCCCCCCCCCEEEEECHHEEEEECCCCCHH
YLFFLSIINYSRHNGYTGIYTIVSRAMLTILKRSGWQVEVIKEAHITEKERIYLLHLPID
HHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHCCCCEEEEEECCCCCCCCEEEEEEECCC
RDNQARLLLQVNQRLQDPCSVLSTWPISLPVMPESA
CCCCHHHHHHHHHHHCCHHHHHHCCCCEECCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA