| Definition | Yersinia pestis KIM 10 chromosome, complete genome. |
|---|---|
| Accession | NC_004088 |
| Length | 4,600,755 |
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The map label for this gene is 22127247
Identifier: 22127247
GI number: 22127247
Start: 3716794
End: 3717189
Strand: Reverse
Name: 22127247
Synonym: y3371
Alternate gene names: NA
Gene position: 3717189-3716794 (Counterclockwise)
Preceding gene: 22127248
Following gene: 22127246
Centisome position: 80.8
GC content: 38.13
Gene sequence:
>396_bases ATGATGAATAAATTTTTTAAAATAATATCGATAAATTTATTGGCAATTTCTCTTGGTGGTTGTGGGATGATGCTTAATCC TCTGCTTATGAAGCAGGCTGAAGTTGAACCCAACAACTTACCTGATGGTAAGTTAGGACAACCCTATTATGCTAAACTTA GAATAACGGGGGGAGGCGGTGCTATTGCTTCTTTTAAGGGAGAATCGATGCCAGTTGGATCAGGGTTGGTATTAACATCG GATAATCCAGAGCGACCACCGGGTAGAGATGAACTGGTTATAAAAGGCATTCCTGTGATATCTGGTGATATTACGTTTAG AGTCAGCGGTGCCTTGTTTAGTAGTGCAGATAAAGGTTATTTTGGTAAAGAATATAAATTAAAAATAGCCGAATAA
Upstream 100 bases:
>100_bases TATAACTGTATTTATATCTACACCTTTAATCTATAAGCGTTAGATGGTTTTTTAGAGTGTTAATTTTTTGGGGGCGGCAT GTTAAAAAATGTCATAAATT
Downstream 100 bases:
>100_bases TATTAATTTCGGTAATGACTCCAATTGGTTGAATTTGATGTACAATGCGATTTTTTGAGGTTTGCTCATGGCTTGCATTA ACGTTCATTGTCCCCGTTGT
Product: putative lipoprotein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 131; Mature: 131
Protein sequence:
>131_residues MMNKFFKIISINLLAISLGGCGMMLNPLLMKQAEVEPNNLPDGKLGQPYYAKLRITGGGGAIASFKGESMPVGSGLVLTS DNPERPPGRDELVIKGIPVISGDITFRVSGALFSSADKGYFGKEYKLKIAE
Sequences:
>Translated_131_residues MMNKFFKIISINLLAISLGGCGMMLNPLLMKQAEVEPNNLPDGKLGQPYYAKLRITGGGGAIASFKGESMPVGSGLVLTS DNPERPPGRDELVIKGIPVISGDITFRVSGALFSSADKGYFGKEYKLKIAE >Mature_131_residues MMNKFFKIISINLLAISLGGCGMMLNPLLMKQAEVEPNNLPDGKLGQPYYAKLRITGGGGAIASFKGESMPVGSGLVLTS DNPERPPGRDELVIKGIPVISGDITFRVSGALFSSADKGYFGKEYKLKIAE
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 13967; Mature: 13967
Theoretical pI: Translated: 9.46; Mature: 9.46
Prosite motif: PS00013 PROKAR_LIPOPROTEIN
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.8 %Cys (Translated Protein) 4.6 %Met (Translated Protein) 5.3 %Cys+Met (Translated Protein) 0.8 %Cys (Mature Protein) 4.6 %Met (Mature Protein) 5.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MMNKFFKIISINLLAISLGGCGMMLNPLLMKQAEVEPNNLPDGKLGQPYYAKLRITGGGG CCCHHEEEEEEEEEEEEECCCCHHHCHHHHHHCCCCCCCCCCCCCCCCEEEEEEEECCCC AIASFKGESMPVGSGLVLTSDNPERPPGRDELVIKGIPVISGDITFRVSGALFSSADKGY EEEEECCCCCCCCCCEEEECCCCCCCCCCCCEEEECCCEEECCEEEEECCEEECCCCCCC FGKEYKLKIAE CCCEEEEEECC >Mature Secondary Structure MMNKFFKIISINLLAISLGGCGMMLNPLLMKQAEVEPNNLPDGKLGQPYYAKLRITGGGG CCCHHEEEEEEEEEEEEECCCCHHHCHHHHHHCCCCCCCCCCCCCCCCEEEEEEEECCCC AIASFKGESMPVGSGLVLTSDNPERPPGRDELVIKGIPVISGDITFRVSGALFSSADKGY EEEEECCCCCCCCCCEEEECCCCCCCCCCCCEEEECCCEEECCEEEEECCEEECCCCCCC FGKEYKLKIAE CCCEEEEEECC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA