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The map label for this gene is 22127245

Identifier: 22127245

GI number: 22127245

Start: 3714018

End: 3714521

Strand: Reverse

Name: 22127245

Synonym: y3369

Alternate gene names: NA

Gene position: 3714521-3714018 (Counterclockwise)

Preceding gene: 22127246

Following gene: 22127244

Centisome position: 80.74

GC content: 50.99

Gene sequence:

>504_bases
TTGATGTCCTCTTCAAGCTTCCAAAATGAGATACCTAAAGCACGCATTAACATCAAATTAGACCTGCATACTGGCGGGGC
GCAAAAGAAAGTCGAACTGCCTTTGAAGTTGTTGGTGATGGGCGATTACAGCAACGGTCAGGAGCAGCGCCCGCTGTCTG
AACGTGAAAAACTCAATATCAATAAAAATAATTTTAACAGTGTGCTGGCTGAATTCCAACCGAGCCTGAAACTCGCTGTA
CCGGACACGCTGGCCGGGGATAACACCGATACAGCCGTCTCCCTGACCTTCAACGACATGAAAGATTTCGAGCCAGAAAA
CGTGGCCCGTCAAATTCCGCAACTGCGTGCCTTGCTGGCCATGCGCAACCTGCTGCGAGACCTTAAATCCAATCTGCTGG
ACAACGCCACCTTCCGCCGTGAGCTGGAAAATATCCTCAAAGACGATGCCTTGAGCGATGAACTGCGCGCTGAACTGGCG
GCCCTGGCGCCAAAAGAGGGTTAA

Upstream 100 bases:

>100_bases
TAATCCGTGGGTGGTGAATGCTGTGCCAGGTAACGTAGATTATTTTTATTCATTCTCTCTGTGGTGGATTTCCTTAATTC
CCTTCCCTTAATAAGGAACG

Downstream 100 bases:

>100_bases
TCCCGGGATTGGCTGCTTGTCATTAGAAAGAAGAAAAGGAACATGCTGATGTCTGTACAGGAAAACCGTGCGCAGGGTAC
TGCGACGACCGTATTAAAGA

Product: hypothetical protein

Products: NA

Alternate protein names: Type VI Secretion Protein Family; Cytoplasmic Protein SciH; Protein ImpB; Cytoplasmic Protein; Type VI Secretion Protein VasQ; T6ss S; Conserved Protein; Type VI Secretion System Protein ImpB; Type VI Secretion System Protein; Intracellular Growth Locus Subunit A; Type VI Secretion

Number of amino acids: Translated: 167; Mature: 167

Protein sequence:

>167_residues
MMSSSSFQNEIPKARINIKLDLHTGGAQKKVELPLKLLVMGDYSNGQEQRPLSEREKLNINKNNFNSVLAEFQPSLKLAV
PDTLAGDNTDTAVSLTFNDMKDFEPENVARQIPQLRALLAMRNLLRDLKSNLLDNATFRRELENILKDDALSDELRAELA
ALAPKEG

Sequences:

>Translated_167_residues
MMSSSSFQNEIPKARINIKLDLHTGGAQKKVELPLKLLVMGDYSNGQEQRPLSEREKLNINKNNFNSVLAEFQPSLKLAV
PDTLAGDNTDTAVSLTFNDMKDFEPENVARQIPQLRALLAMRNLLRDLKSNLLDNATFRRELENILKDDALSDELRAELA
ALAPKEG
>Mature_167_residues
MMSSSSFQNEIPKARINIKLDLHTGGAQKKVELPLKLLVMGDYSNGQEQRPLSEREKLNINKNNFNSVLAEFQPSLKLAV
PDTLAGDNTDTAVSLTFNDMKDFEPENVARQIPQLRALLAMRNLLRDLKSNLLDNATFRRELENILKDDALSDELRAELA
ALAPKEG

Specific function: Unknown

COG id: COG3516

COG function: function code S; Uncharacterized protein conserved in bacteria

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 18705; Mature: 18705

Theoretical pI: Translated: 5.07; Mature: 5.07

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
3.0 %Met     (Translated Protein)
3.0 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
3.0 %Met     (Mature Protein)
3.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MMSSSSFQNEIPKARINIKLDLHTGGAQKKVELPLKLLVMGDYSNGQEQRPLSEREKLNI
CCCCCCHHHCCCCEEEEEEEEEECCCCCCEEECCEEEEEEECCCCCCCCCCCCHHHHCCC
NKNNFNSVLAEFQPSLKLAVPDTLAGDNTDTAVSLTFNDMKDFEPENVARQIPQLRALLA
CCCHHHHHHHHHCCCEEEECCCCCCCCCCCCEEEEEECCCCCCCHHHHHHHHHHHHHHHH
MRNLLRDLKSNLLDNATFRRELENILKDDALSDELRAELAALAPKEG
HHHHHHHHHHHHHCCHHHHHHHHHHHHHCCCHHHHHHHHHHHCCCCC
>Mature Secondary Structure
MMSSSSFQNEIPKARINIKLDLHTGGAQKKVELPLKLLVMGDYSNGQEQRPLSEREKLNI
CCCCCCHHHCCCCEEEEEEEEEECCCCCCEEECCEEEEEEECCCCCCCCCCCCHHHHCCC
NKNNFNSVLAEFQPSLKLAVPDTLAGDNTDTAVSLTFNDMKDFEPENVARQIPQLRALLA
CCCHHHHHHHHHCCCEEEECCCCCCCCCCCCEEEEEECCCCCCCHHHHHHHHHHHHHHHH
MRNLLRDLKSNLLDNATFRRELENILKDDALSDELRAELAALAPKEG
HHHHHHHHHHHHHCCHHHHHHHHHHHHHCCCHHHHHHHHHHHCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA