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The map label for this gene is 22127143

Identifier: 22127143

GI number: 22127143

Start: 3598579

End: 3598950

Strand: Reverse

Name: 22127143

Synonym: y3267

Alternate gene names: NA

Gene position: 3598950-3598579 (Counterclockwise)

Preceding gene: 22127147

Following gene: 22127142

Centisome position: 78.23

GC content: 43.82

Gene sequence:

>372_bases
GTGAATAAGATGGCAAAACTACAATACATTCATGATGAAGCAGGAAAGCCTCAGTTTGTGGTTTTACCCGTTGCCGAATA
CCAGCAGCTTATCTCTAATGCAAAGTATGAGGATATTCCCTATGTTGCTGATAACGATGATGATCAGACGATCCCGAATG
AAGTTGTTCAAATCATGGTAAACGATGGTGTCAGTTTGCTGGCTGCATGGCGTATCTACCGTGGTTTTTCGCAATATGAA
ATAGCAGAACTGCTTGGCACCACCCAATCTGCTGTATCCCAATGGGAAGCCGTAGATTCTCGCCCACAGAAGAAAACCAG
AGAGAAATTAGCAGCAATTTATAAATGCCGGGCGGCGCAGATGATTTTGTGA

Upstream 100 bases:

>100_bases
TATGTACAATCCAGGAAGTTAAACGTAGAACCACGGCAACCTATTAGGTTAGCTCAGTATATTTTCCCTCAAAGGCATGG
TGTTATTTTTCTAAACTAAG

Downstream 100 bases:

>100_bases
GTGCTAAAGATAAAAATTAGAGGCTTTGGTGACCTCAATAACCATAACTAATTAATAATAGTTAAATCACGCTCACAAAC
AAACCTAATAGGTTAATGAC

Product: hypothetical protein

Products: NA

Alternate protein names: Transcriptional Regulator; Xin-Antitoxin System Antitoxin Component Xre Family; Helix-Turn-Helix Family; Helix-Turn-Helix Domain-Containing Protein; Transcriptional Regulator XRE Family

Number of amino acids: Translated: 123; Mature: 123

Protein sequence:

>123_residues
MNKMAKLQYIHDEAGKPQFVVLPVAEYQQLISNAKYEDIPYVADNDDDQTIPNEVVQIMVNDGVSLLAAWRIYRGFSQYE
IAELLGTTQSAVSQWEAVDSRPQKKTREKLAAIYKCRAAQMIL

Sequences:

>Translated_123_residues
MNKMAKLQYIHDEAGKPQFVVLPVAEYQQLISNAKYEDIPYVADNDDDQTIPNEVVQIMVNDGVSLLAAWRIYRGFSQYE
IAELLGTTQSAVSQWEAVDSRPQKKTREKLAAIYKCRAAQMIL
>Mature_123_residues
MNKMAKLQYIHDEAGKPQFVVLPVAEYQQLISNAKYEDIPYVADNDDDQTIPNEVVQIMVNDGVSLLAAWRIYRGFSQYE
IAELLGTTQSAVSQWEAVDSRPQKKTREKLAAIYKCRAAQMIL

Specific function: Unknown

COG id: COG1396

COG function: function code K; Predicted transcriptional regulators

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 13996; Mature: 13996

Theoretical pI: Translated: 4.86; Mature: 4.86

Prosite motif: PS50943 HTH_CROC1

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.8 %Cys     (Translated Protein)
3.3 %Met     (Translated Protein)
4.1 %Cys+Met (Translated Protein)
0.8 %Cys     (Mature Protein)
3.3 %Met     (Mature Protein)
4.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNKMAKLQYIHDEAGKPQFVVLPVAEYQQLISNAKYEDIPYVADNDDDQTIPNEVVQIMV
CCCCHHHHHHHCCCCCCCEEEEEHHHHHHHHHCCCCCCCCCCCCCCCCCCCHHHHHHHHH
NDGVSLLAAWRIYRGFSQYEIAELLGTTQSAVSQWEAVDSRPQKKTREKLAAIYKCRAAQ
CCCHHHHHHHHHHHCCCHHHHHHHHCCHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHH
MIL
HCC
>Mature Secondary Structure
MNKMAKLQYIHDEAGKPQFVVLPVAEYQQLISNAKYEDIPYVADNDDDQTIPNEVVQIMV
CCCCHHHHHHHCCCCCCCEEEEEHHHHHHHHHCCCCCCCCCCCCCCCCCCCHHHHHHHHH
NDGVSLLAAWRIYRGFSQYEIAELLGTTQSAVSQWEAVDSRPQKKTREKLAAIYKCRAAQ
CCCHHHHHHHHHHHCCCHHHHHHHHCCHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHH
MIL
HCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA