| Definition | Yersinia pestis KIM 10 chromosome, complete genome. |
|---|---|
| Accession | NC_004088 |
| Length | 4,600,755 |
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The map label for this gene is 22127137
Identifier: 22127137
GI number: 22127137
Start: 3594242
End: 3594901
Strand: Direct
Name: 22127137
Synonym: y3262
Alternate gene names: NA
Gene position: 3594242-3594901 (Clockwise)
Preceding gene: 22127136
Following gene: 22127139
Centisome position: 78.12
GC content: 46.67
Gene sequence:
>660_bases ATGAGTGCGCTGGTGCATTATTCGGAATGTATTCCCTTTAACGTTTCATCAATGATGGCGAAATCCTGGCGCTCCAGCCG CTCATATTCTGCCCTCACTGCCGGTTTCTTTAGCATTCGGGCGACCACTTGTTCATGGGACAGGCTTGGTGGTTGGCGTT TATTATCCAAATCGCAACTCCTTCATTCGTTTAGCGGCTTTGCCTTTCTCTTTCCACGGCATATAAGCCGTTTTTTGCAC CACAATATGCAAAATAACAATCTGCCAGTCTATTTGTGCCATAAAAATGACGCGGTTCCAGCCTTTCGGCTCATAAAAAC ACAGCTCAAACACATCTTCGTGGTAATGCATCGGGACAGCATCAACCATCTTAATACCGTAGCGCTTCATACGTTTAGCC AGGCTAATAAAATTGGCCTGCAAGCTGATGGGTTGGGCAAGAAGCTGGGTGATGACATCATCATCGTAATATTCAATGGT GTAGTTCATAGGCTAAAAAATAACAGAAACGTTATTTTCCTCCGGCTGCGGATGTATCAAAAGGAACGCCCCGACATCAC TCAATACTGCCGGGGCGTTTATCCACCACGGAGCAAGGGTGGCGCGGTGGATACAATGAGTCTACGAATATTCCCGTTGG GTGCAACTACTGGACAATAG
Upstream 100 bases:
>100_bases CGCCACCGATAAAAATAGGGGGGCGGGCTATCGCTTTTGTTGAAAGTGAGGTGAATGACTGGATTGAACAGCAAATTGCA CATTCACGGGGAAATAAGCA
Downstream 100 bases:
>100_bases AATCAGATTATCTGCATCTCATTGATACATAAATTGTATTTATAAAATTTAAAACATTGCTATGGGTGTTAAAAATGGCC CGAAAATGGATTTTATCCGC
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 219; Mature: 218
Protein sequence:
>219_residues MSALVHYSECIPFNVSSMMAKSWRSSRSYSALTAGFFSIRATTCSWDRLGGWRLLSKSQLLHSFSGFAFLFPRHISRFLH HNMQNNNLPVYLCHKNDAVPAFRLIKTQLKHIFVVMHRDSINHLNTVALHTFSQANKIGLQADGLGKKLGDDIIIVIFNG VVHRLKNNRNVIFLRLRMYQKERPDITQYCRGVYPPRSKGGAVDTMSLRIFPLGATTGQ
Sequences:
>Translated_219_residues MSALVHYSECIPFNVSSMMAKSWRSSRSYSALTAGFFSIRATTCSWDRLGGWRLLSKSQLLHSFSGFAFLFPRHISRFLH HNMQNNNLPVYLCHKNDAVPAFRLIKTQLKHIFVVMHRDSINHLNTVALHTFSQANKIGLQADGLGKKLGDDIIIVIFNG VVHRLKNNRNVIFLRLRMYQKERPDITQYCRGVYPPRSKGGAVDTMSLRIFPLGATTGQ >Mature_218_residues SALVHYSECIPFNVSSMMAKSWRSSRSYSALTAGFFSIRATTCSWDRLGGWRLLSKSQLLHSFSGFAFLFPRHISRFLHH NMQNNNLPVYLCHKNDAVPAFRLIKTQLKHIFVVMHRDSINHLNTVALHTFSQANKIGLQADGLGKKLGDDIIIVIFNGV VHRLKNNRNVIFLRLRMYQKERPDITQYCRGVYPPRSKGGAVDTMSLRIFPLGATTGQ
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 24936; Mature: 24805
Theoretical pI: Translated: 11.05; Mature: 11.05
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.8 %Cys (Translated Protein) 3.2 %Met (Translated Protein) 5.0 %Cys+Met (Translated Protein) 1.8 %Cys (Mature Protein) 2.8 %Met (Mature Protein) 4.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSALVHYSECIPFNVSSMMAKSWRSSRSYSALTAGFFSIRATTCSWDRLGGWRLLSKSQL CCCEEEHHHCCCCCHHHHHHHHHHCCCCCHHHHHHHEEEEEEECCCHHCCCEEEHHHHHH LHSFSGFAFLFPRHISRFLHHNMQNNNLPVYLCHKNDAVPAFRLIKTQLKHIFVVMHRDS HHHHCCHHHHHHHHHHHHHHCCCCCCCCEEEEEECCCCCHHHHHHHHHHHHEEEEEECCC INHLNTVALHTFSQANKIGLQADGLGKKLGDDIIIVIFNGVVHRLKNNRNVIFLRLRMYQ CCHHHHHHHHHHHHCCCCCCCCCCCCHHCCCCEEEEEHHHHHHHHCCCCCEEEEEEEECC KERPDITQYCRGVYPPRSKGGAVDTMSLRIFPLGATTGQ CCCCCHHHHHCCCCCCCCCCCCEEEEEEEEEEECCCCCC >Mature Secondary Structure SALVHYSECIPFNVSSMMAKSWRSSRSYSALTAGFFSIRATTCSWDRLGGWRLLSKSQL CCEEEHHHCCCCCHHHHHHHHHHCCCCCHHHHHHHEEEEEEECCCHHCCCEEEHHHHHH LHSFSGFAFLFPRHISRFLHHNMQNNNLPVYLCHKNDAVPAFRLIKTQLKHIFVVMHRDS HHHHCCHHHHHHHHHHHHHHCCCCCCCCEEEEEECCCCCHHHHHHHHHHHHEEEEEECCC INHLNTVALHTFSQANKIGLQADGLGKKLGDDIIIVIFNGVVHRLKNNRNVIFLRLRMYQ CCHHHHHHHHHHHHCCCCCCCCCCCCHHCCCCEEEEEHHHHHHHHCCCCCEEEEEEEECC KERPDITQYCRGVYPPRSKGGAVDTMSLRIFPLGATTGQ CCCCCHHHHHCCCCCCCCCCCCEEEEEEEEEEECCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA