| Definition | Yersinia pestis KIM 10 chromosome, complete genome. |
|---|---|
| Accession | NC_004088 |
| Length | 4,600,755 |
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The map label for this gene is 22127076
Identifier: 22127076
GI number: 22127076
Start: 3520008
End: 3520598
Strand: Reverse
Name: 22127076
Synonym: y3200
Alternate gene names: NA
Gene position: 3520598-3520008 (Counterclockwise)
Preceding gene: 22127077
Following gene: 22127075
Centisome position: 76.52
GC content: 33.84
Gene sequence:
>591_bases ATGATATTGGTAATTGGATTACTTTATCTATCAGTGAGACATAGATCCATGTTCCATAGTCAGAGAGCGTTTACTTTGCT CGAATTATTATTGGCCATGATAATTATCTCAGGACTCTACTACTCTGTACTTATAACATTGCCTAAAGGCAGCGGGGTCG TGAAGAGTGAAGCCGAGAACCTCGTGCAAGGATTACGATATATTAACCAAAAAATTCGACATGAAGGCGGGGTGTTTGGG TTGAAATTATCAGAGACACACTGGCGATTCTATAAATTTTGTTGCGATGATTGTCATGGCATAAAAGATAATTTTAAAAT TAACACTAAAATAAATTGTATTTGGCAAGATTCCGGAAATGATAAGATTCTAAGCAGAGAGTATCCAGATAAATTAACAT CTAAACTTAATGTCTATGGTGAAGATAGTATCATTGATAATGTCATTGGGGATAATATTAAACCACAATTGGTTTTCTCT CCAGAGGAGGAGTATTCGGACTTCTCCTTGGTTTTAAGAAATGAAGAAAATAGTGAGTGTGTTGAAATAAAAAATAATAT TACAGGAGTAAGTCTATTTATTCATAAATAA
Upstream 100 bases:
>100_bases ACAGATCCATGGGGGAATTCTTACCAAATGAATAACCCAGGAAAACATGGCCAGATAGATATATTTTCAATAGGACCTGA TAGGTTACCGGAAACTGAGG
Downstream 100 bases:
>100_bases AACAGGGGGCAATCTGAATAATACAAAAGGTTTTACATTGTTAGAAGTAATAATTGCACTGACAATATTTTGTATTGCCG GATTGAGTATCATGAAAATA
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 196; Mature: 196
Protein sequence:
>196_residues MILVIGLLYLSVRHRSMFHSQRAFTLLELLLAMIIISGLYYSVLITLPKGSGVVKSEAENLVQGLRYINQKIRHEGGVFG LKLSETHWRFYKFCCDDCHGIKDNFKINTKINCIWQDSGNDKILSREYPDKLTSKLNVYGEDSIIDNVIGDNIKPQLVFS PEEEYSDFSLVLRNEENSECVEIKNNITGVSLFIHK
Sequences:
>Translated_196_residues MILVIGLLYLSVRHRSMFHSQRAFTLLELLLAMIIISGLYYSVLITLPKGSGVVKSEAENLVQGLRYINQKIRHEGGVFG LKLSETHWRFYKFCCDDCHGIKDNFKINTKINCIWQDSGNDKILSREYPDKLTSKLNVYGEDSIIDNVIGDNIKPQLVFS PEEEYSDFSLVLRNEENSECVEIKNNITGVSLFIHK >Mature_196_residues MILVIGLLYLSVRHRSMFHSQRAFTLLELLLAMIIISGLYYSVLITLPKGSGVVKSEAENLVQGLRYINQKIRHEGGVFG LKLSETHWRFYKFCCDDCHGIKDNFKINTKINCIWQDSGNDKILSREYPDKLTSKLNVYGEDSIIDNVIGDNIKPQLVFS PEEEYSDFSLVLRNEENSECVEIKNNITGVSLFIHK
Specific function: Unknown
COG id: COG2165
COG function: function code NU; Type II secretory pathway, pseudopilin PulG
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 22464; Mature: 22464
Theoretical pI: Translated: 6.78; Mature: 6.78
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.6 %Cys (Translated Protein) 1.5 %Met (Translated Protein) 4.1 %Cys+Met (Translated Protein) 2.6 %Cys (Mature Protein) 1.5 %Met (Mature Protein) 4.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MILVIGLLYLSVRHRSMFHSQRAFTLLELLLAMIIISGLYYSVLITLPKGSGVVKSEAEN CEEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEECCCCCCCHHHHHHH LVQGLRYINQKIRHEGGVFGLKLSETHWRFYKFCCDDCHGIKDNFKINTKINCIWQDSGN HHHHHHHHHHHHHHCCCEEEEEECCCHHHHHHHHHHHCCCCCCCEEEEEEEEEEEECCCC DKILSREYPDKLTSKLNVYGEDSIIDNVIGDNIKPQLVFSPEEEYSDFSLVLRNEENSEC CCEECCCCCHHHHHHEECCCCCHHHHHHHCCCCCCEEEECCCCCCCCEEEEEECCCCCCE VEIKNNITGVSLFIHK EEECCCCCEEEEEEEC >Mature Secondary Structure MILVIGLLYLSVRHRSMFHSQRAFTLLELLLAMIIISGLYYSVLITLPKGSGVVKSEAEN CEEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEECCCCCCCHHHHHHH LVQGLRYINQKIRHEGGVFGLKLSETHWRFYKFCCDDCHGIKDNFKINTKINCIWQDSGN HHHHHHHHHHHHHHCCCEEEEEECCCHHHHHHHHHHHCCCCCCCEEEEEEEEEEEECCCC DKILSREYPDKLTSKLNVYGEDSIIDNVIGDNIKPQLVFSPEEEYSDFSLVLRNEENSEC CCEECCCCCHHHHHHEECCCCCHHHHHHHCCCCCCEEEECCCCCCCCEEEEEECCCCCCE VEIKNNITGVSLFIHK EEECCCCCEEEEEEEC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA